RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 SLC29A2Q14542 456 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 ANKRD52Q8NB46 1076 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 CCDC110Q8TBZ0 833 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
TTC17-202ENST00000299240 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 GPR62Q9BZJ7 368 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 ETNK2Q9NVF9 386 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 TRDMT1O14717 391 aaKnown RBP13.17□□□□□ -0.3
TTC17-202ENST00000299240 AVILO75366 819 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 MAP2K2P36507 400 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 IFNAR2P48551 515 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 AP1B1Q10567 949 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 CLEC20AQ6ZU45 233 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 CD101Q93033 1021 aa13.17□□□□□ -0.3
TTC17-202ENST00000299240 NOVA2Q9UNW9 492 aaKnown RBP13.17□□□□□ -0.3
TTC17-202ENST00000299240 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 CAPN2P17655 700 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 SLC1A1P43005 524 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 GBE1Q04446 702 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 UBR7Q8N806 425 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 DCLK3Q9C098 648 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 SAYSD1Q9NPB0 183 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 MTRF1LQ9UGC7 380 aaKnown RBP13.16□□□□□ -0.3
TTC17-202ENST00000299240 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 ODC1P11926 461 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 CHRNA3P32297 505 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 TAS1R1Q7RTX1 841 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 PAF1Q8N7H5 531 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 CTNNAL1Q9UBT7 734 aa13.16□□□□□ -0.3
TTC17-202ENST00000299240 E2F8A0AVK6 867 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 USP12O75317 370 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 CSF2RAP15509 400 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 SELPP16109 830 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 KDELR1P24390 212 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 PNPLA4P41247 253 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 DUSP4Q13115 394 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 PTK7Q13308 1070 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 NNTQ13423 1086 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 TUSC3Q13454 348 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 ANKRD42Q8N9B4 389 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 SLC35F5Q8WV83 523 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 LINC01599Q8WXQ3 324 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 LGMNQ99538 433 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 SMOQ99835 787 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 SMPD4Q9NXE4 827 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 MCF2LO15068 1137 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 APRTP07741 180 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 IRF1P10914 325 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 CRADDP78560 199 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 OLIG2Q13516 323 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 UPP1Q16831 310 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 TFAP2DQ7Z6R9 452 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 ERLEC1Q96DZ1 483 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
TTC17-202ENST00000299240 AP4E1Q9UPM8 1137 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 E7EVH7 732 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 RAG1P15918 1043 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 CCDC13Q8IYE1 715 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 ZBED8Q8IZ13 594 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 EPS8L3Q8TE67 593 aaKnown RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 PPANQ9NQ55 473 aaKnown RBP13.15□□□□□ -0.3
TTC17-202ENST00000299240 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
TTC17-202ENST00000299240 NEBLO76041 1014 aa13.14□□□□□ -0.31
TTC17-202ENST00000299240 ALDH2P05091 517 aa13.14□□□□□ -0.31
TTC17-202ENST00000299240 KRT7P08729 469 aa13.14□□□□□ -0.31
TTC17-202ENST00000299240 ALDH7A1P49419 539 aaKnown RBP13.14□□□□□ -0.31
TTC17-202ENST00000299240 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
TTC17-202ENST00000299240 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
TTC17-202ENST00000299240 CCSAPQ6IQ19 270 aaPredicted RBP13.14□□□□□ -0.31
TTC17-202ENST00000299240 RCOR2Q8IZ40 523 aa13.14□□□□□ -0.31
TTC17-202ENST00000299240 AENQ8WTP8 325 aaKnown RBP13.14□□□□□ -0.31
TTC17-202ENST00000299240 CWC15Q9P013 229 aaKnown RBP13.14□□□□□ -0.31
TTC17-202ENST00000299240 C2CD4BA6NLJ0 364 aa13.14□□□□□ -0.31
TTC17-202ENST00000299240 TRUB2O95900 331 aaKnown RBP13.14□□□□□ -0.31
TTC17-202ENST00000299240 ZBED1O96006 694 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms