RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CENPIQ92674 756 aaPredicted RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 APBB2Q92870 758 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 HAUS1Q96CS2 278 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SUSD3Q96L08 255 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 MAK16Q9BXY0 300 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 FOXP3Q9BZS1 431 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 EPB41L4BQ9H329 900 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 CACNG4Q9UBN1 327 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 DSEQ9UL01 958 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 COL4A6Q14031 1691 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 GRAP2O75791 330 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 IVLP07476 585 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 TYMPP19971 482 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 RDXP35241 583 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 SLC8A3P57103 927 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 DYNLT1P63172 113 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 GNGT1P63211 74 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 MTFR1Q15390 333 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SKIDA1Q1XH10 827 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 VSIG1Q86XK7 387 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 MAP7D3Q8IWC1 876 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SLC2A14Q8TDB8 520 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 PIWIL1Q96J94 861 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 CALN1Q9BXU9 219 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 B3GNT5Q9BYG0 378 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 TMEM161AQ9NX61 479 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 VWA8A3KMH1 1905 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 CASTOR2A6NHX0 329 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SGK1O00141 431 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 TP73O15350 636 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ATP2C2O75185 946 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SHBGP04278 402 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ODC1P11926 461 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ADORA2BP29275 332 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 PTPN9P43378 593 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 IRAK1P51617 712 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 CDR1P51861 262 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 OASLQ15646 514 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 CDO1Q16878 200 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 P3H1Q32P28 736 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 CCDC14Q49A88 953 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 BOLA3Q53S33 107 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 RAB41Q5JT25 222 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 C6orf118Q5T5N4 469 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 RFX6Q8HWS3 928 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 RSPH1Q8WYR4 309 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 TOX2Q96NM4 488 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ACBD6Q9BR61 282 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 STMN4Q9H169 189 aaPredicted RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 CDC42EP4Q9H3Q1 356 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 CSNK1G1Q9HCP0 422 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 DDX43Q9NXZ2 648 aaKnown RBP9.56□□□□□ -0.88
PDPN-201ENST00000294489 KANSL3Q9P2N6 904 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 PLXNA3P51805 1871 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 TLDC2A0PJX2 215 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 ENPP3O14638 875 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 B4GALT3O60512 393 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 PARNO95453 639 aaKnown RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 POMCP01189 267 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 CDH6P55285 790 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 OTUD4Q01804 1114 aaKnown RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 C15orf59Q2T9L4 293 aaPredicted RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 SCML4Q8N228 414 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 SLC35B2Q8TB61 432 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 MYCBPAPQ8TBZ2 947 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 ACTL9Q8TC94 416 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 DEFB118Q96PH6 123 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 NGRNQ9NPE2 291 aaKnown RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDPN-201ENST00000294489 CWC15Q9P013 229 aaKnown RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 TTC3P53804 2025 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 ZNF487B1APH4 448 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 HHLA1C9JL84 531 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 APOC4-APOC2K7ER74 178 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 RGS16O15492 202 aaPredicted RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 IFNB1P01574 187 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 APOC2P02655 101 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 NPR3P17342 541 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 CHKAP35790 457 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 ATP11AP98196 1134 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 ADCY1Q08828 1119 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 TFDP2Q14188 446 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 KRT81Q14533 505 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 TCTN1Q2MV58 587 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 NOMO2Q5JPE7 1267 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 HIBCHQ6NVY1 386 aaPredicted RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 SCYL2Q6P3W7 929 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 SLC39A5Q6ZMH5 540 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 CLEC20AQ6ZU45 233 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 TEKT4Q8WW24 435 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 PGM2Q96G03 612 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 CFAP57Q96MR6 1250 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 SYT15Q9BQS2 421 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 TMEM121Q9BTD3 319 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 TMEM109Q9BVC6 243 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms