RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 STOX2Q9P2F5 926 aaPredicted RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CRTAMO95727 393 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 ATF6P18850 670 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 RAB27AP51159 221 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 SGCGQ13326 291 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 NCOA4Q13772 614 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 PIK3C3Q8NEB9 887 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 ATP9BO43861 1147 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 HS6ST1O60243 411 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 STX11O75558 287 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 USP10Q14694 798 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 KCTD21Q4G0X4 260 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 PDZK1Q5T2W1 519 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 LONP2Q86WA8 852 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CLPBQ9H078 707 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 SNAP23O00161 211 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 SLC9A3R1O14745 358 aaPredicted RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.224e-11■■□□□ 14.5
PRDM16-201ENST00000270722 RAD51BO15315 384 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 DYNC1LI2O43237 492 aaPredicted RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 SNAPC5O75971 98 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CD2BP2O95400 341 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 IFNGR2P38484 337 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 HMGCS2P54868 508 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 STK4Q13043 487 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 PPIL2Q13356 520 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CCL15Q16663 113 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 COBLL1Q53SF7 1204 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 TFB1MQ8WVM0 346 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 AHCYL2Q96HN2 611 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 BPIFA3Q9BQP9 254 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 GRID1Q9ULK0 1009 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 A0A1W2PQC6 194 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 C17orf102A2RUQ5 167 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 KCNB2Q92953 911 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 TRIM64CA6NLI5 447 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 PHF20L1A8MW92 1017 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 CREMQ03060 361 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 OSBPL5Q9H0X9 879 aaPredicted RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 EDC3Q96F86 508 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 C17orf80Q9BSJ5 609 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 MRPL9Q9BYD2 267 aaKnown RBP13.67□□□□□ -0.22
PRDM16-201ENST00000270722 SEC31BQ9NQW1 1179 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 STARD13Q9Y3M8 1113 aa13.67□□□□□ -0.22
PRDM16-201ENST00000270722 RAB2AP61019 212 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 POLR2LP62875 67 aaKnown RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 CLEC16AQ2KHT3 1053 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 APBB2Q92870 758 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 NOD2Q9HC29 1040 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 POLR1DQ9Y2S0 133 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 MYH7P12883 1935 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 ABLIM1O14639 778 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 SRP72O76094 671 aaKnown RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 TTKP33981 857 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 ZRANB3Q5FWF4 1079 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 LRCH1Q9Y2L9 728 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 TMEM114B3SHH9 223 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 PABPC1P11940 636 aaKnown RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 DPCR1Q3MIW9 517 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 PSMC3IPQ9P2W1 217 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 CCDC166P0CW27 439 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 ZC2HC1CQ53FD0 456 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 EMSYQ7Z589 1322 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 CCDC182A6NF36 153 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 MGAT4DA6NG13 374 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 SFI1A8K8P3 1242 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 UPP2O95045 317 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 NPTXRO95502 500 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 CHRM3P20309 590 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 ATP1A4Q13733 1029 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 STRBPQ96SI9 672 aaKnown RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 HEMGNQ9BXL5 484 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 RANBP17Q9H2T7 1088 aaKnown RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 MROH8Q9H579 483 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 XKR8Q9H6D3 395 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 JMJD4Q9H9V9 463 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 RRN3Q9NYV6 651 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 TRIM66O15016 1216 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 NOS1APO75052 506 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 ANKRD26P1Q6NSI1 321 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 IYDQ6PHW0 289 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 GLMNQ92990 594 aa13.66□□□□□ -0.22
PRDM16-201ENST00000270722 CNOT7Q9UIV1 285 aaKnown RBP13.66□□□□□ -0.22
PRDM16-201ENST00000270722 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms