RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 RNPEPQ9H4A4 650 aa13.48□□□□□ -0.25
SEC23B-201ENST00000262544 ELP3Q9H9T3 547 aa13.48□□□□□ -0.25
SEC23B-201ENST00000262544 SPATS2LQ9NUQ6 558 aaKnown RBP13.48□□□□□ -0.25
SEC23B-201ENST00000262544 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
SEC23B-201ENST00000262544 STRIP2Q9ULQ0 834 aa13.48□□□□□ -0.25
SEC23B-201ENST00000262544 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
SEC23B-201ENST00000262544 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
SEC23B-201ENST00000262544 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
SEC23B-201ENST00000262544 ADGRA2Q96PE1 1338 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 SOWAHBA6NEL2 793 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 SIGLEC16A6NMB1 481 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 I3L4J1 428 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 STAG3L1P0CL83 205 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 CALB2P22676 271 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 ABL2P42684 1182 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 CLDN10P78369 228 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 PEX6Q13608 980 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 EFHC2Q5JST6 749 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 RSPH3Q86UC2 560 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 CLEC4CQ8WTT0 213 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 STK32AQ8WU08 396 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 FAM149B1Q96BN6 582 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 AGAP3Q96P47 875 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 THTPAQ9BU02 230 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 FAM49AQ9H0Q0 323 aaPredicted RBP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 XYLT2Q9H1B5 865 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 LRMDAQ9H2I8 198 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 MFHAS1Q9Y4C4 1052 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 EVPLQ92817 2033 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 LYPLA1O75608 230 aaPredicted RBP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 ZNF286BP0CG31 522 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 SERPINB4P48594 390 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 RTP1P59025 263 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 OLIG2Q13516 323 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 AGGF1Q8N302 714 aaeCLIP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 FAM172AQ8WUF8 416 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 CDT1Q9H211 546 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 SIX4Q9UIU6 781 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 CPSF3Q9UKF6 684 aaKnown RBP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
SEC23B-201ENST00000262544 ACTL7BQ9Y614 415 aa13.47□□□□□ -0.25
SEC23B-201ENST00000262544 LOC100653049A0A140TA62 436 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
SEC23B-201ENST00000262544 KRT34O76011 436 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 TPBGLP0DKB5 382 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 TXNP10599 105 aaKnown RBP13.46□□□□□ -0.25
SEC23B-201ENST00000262544 KCNA4P22459 653 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 ZNF132P52740 706 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
SEC23B-201ENST00000262544 EPHB1P54762 984 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 AQP5P55064 265 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 MPZL3Q6UWV2 235 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 CEP128Q6ZU80 1094 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 BBS12Q6ZW61 710 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 SLC4A11Q8NBS3 891 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 UCMAQ8WVF2 138 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 MOCOSQ96EN8 888 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 TMPRSS4Q9NRS4 437 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 SENP1Q9P0U3 644 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 DRG1Q9Y295 367 aaKnown RBP13.46□□□□□ -0.25
SEC23B-201ENST00000262544 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 NFKBIEO00221 500 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 FCHO1O14526 889 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 MED7O43513 233 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 NPTXRO95502 500 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 PGGT1BP53609 377 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 GBE1Q04446 702 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 UBAP2LQ14157 1087 aaKnown RBP13.46□□□□□ -0.25
SEC23B-201ENST00000262544 RASA2Q15283 850 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 NUDCD3Q8IVD9 361 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 BANPQ8N9N5 519 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 CCNYQ8ND76 341 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 TMEM176AQ96HP8 235 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 DLGAP2Q9P1A6 1054 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 TTLL3Q9Y4R7 772 aa13.46□□□□□ -0.25
SEC23B-201ENST00000262544 USP12O75317 370 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 SMNDC1O75940 238 aaKnown RBP eCLIP13.46□□□□□ -0.26
SEC23B-201ENST00000262544 TRUB2O95900 331 aaKnown RBP13.46□□□□□ -0.26
SEC23B-201ENST00000262544 PTPN4P29074 926 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 PGM1P36871 562 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 TUBP50607 506 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 BST1Q10588 318 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 CCDC142Q17RM4 750 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 TRNP1Q6NT89 227 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 ASNSD1Q9NWL6 643 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 STYXL1Q9Y6J8 313 aa13.46□□□□□ -0.26
SEC23B-201ENST00000262544 APOC4-APOC2K7ER74 178 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms