RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Svs3bQ8BZH8 265 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Dcun1d2Q8BZJ7 259 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Trub1Q8C0D0 338 aaKnown RBP12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Trim61Q8JZK6 461 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Nudcd3Q8R1N4 363 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Fgd4Q91ZT5 766 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 MutyhQ99P21 515 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Psmd8Q9CX56 353 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Med7Q9CZB6 233 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 PolhQ9JJN0 694 aa12.62□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ms4a14A0A087WSD2 1232 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Gm20721E9Q2U8 318 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Bmpr2O35607 1038 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Adam15O88839 864 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Hoxc6P10629 235 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 PrkcdP28867 674 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Crhr1P35347 415 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 SftpdP50404 374 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 SnnP61807 88 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Arid5aQ3U108 590 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Cand1Q6ZQ38 1230 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Olfr670Q7TRP3 312 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Hdac7Q8C2B3 938 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Pgm2l1Q8CAA7 621 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Acvr1cQ8K348 493 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Mta1Q8K4B0 715 aaKnown RBP12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Clptm1Q8VBZ3 664 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Pcdhb4Q91XZ6 784 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Pdk3Q922H2 415 aaKnown RBP12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Txndc12Q9CQU0 170 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Nudt5Q9JKX6 218 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Cpsf3Q9QXK7 684 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 PapolbQ9WVP6 641 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Top3bQ9Z321 862 aaKnown RBP12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Col24a1Q30D77 1733 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Has3O08650 554 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Cyp2a4P15392 494 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Cyp2a5P20852 494 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Usp10P52479 792 aaKnown RBP12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Znf746Q3U133 652 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Gata6Q61169 589 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Fcrl5Q68SN8 596 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Scaf4Q6PFF0 1209 aaKnown RBP12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ip6k2Q80V72 448 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ppp1r12bQ8BG95 976 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Clec4gQ8BNX1 294 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 OgtQ8CGY8 1046 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Rmnd1Q8CI78 450 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Mcrs1Q99L90 462 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Rpap3Q9D706 660 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ap2b1Q9DBG3 937 aa12.61□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ism2D3Z6A3 493 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Apol11aE9PZG0 334 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Glb1P23780 647 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Rab17P35292 214 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Scarf2P59222 833 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Samhd1Q60710 627 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 ItpkcQ7TS72 678 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 RimklbQ80WS1 387 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Stau2Q8CJ67 570 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Q8R1Y2 203 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Fam192aQ91WE2 254 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Trps1Q925H1 1281 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 MlklQ9D2Y4 472 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Pdpk1Q9Z2A0 559 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Rtl9Q32KG4 1339 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Brca1P48754 1812 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Arhgef37A1IGU4 676 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Gm12394A2AKP6 982 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ccdc175E9PVB3 822 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 C130060K24RikG3UWA8 416 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Nek2O35942 443 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Tnk2O54967 1055 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Gsta4P24472 222 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Tnni3P48787 211 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Atp5bP56480 529 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ikzf1Q03267 517 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 PrcpQ7TMR0 491 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Gabbr2Q80T41 940 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Tmem74Q8BQU7 305 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Rsl1d1Q8BVY0 452 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ptrh1Q8BW00 204 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Cog3Q8CI04 820 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Kat14Q8CID0 779 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ablim1Q8K4G5 861 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Rnf112Q96DY5 654 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ccdc103Q9D9P2 237 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Scyl1Q9EQC5 806 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 0610012G03RikA0A0J9YTR2 95 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Mageb2A2AHM0 380 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ptpn3A2ALK8 913 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Tatdn2B7ZNL9 783 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 ChkaO54804 453 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 UmpsP13439 481 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Cdh8P97291 799 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ly9Q01965 654 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Tfdp1Q08639 410 aa12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Tars2Q3UQ84 723 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 PrkciQ62074 595 aaKnown RBP12.6□□□□□ -0.39
Lig1-201ENSMUST00000098814 Ankrd6Q69ZU8 712 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms