RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 DcpsQ9DAR7 338 aa7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Prl2a1Q9JHK0 228 aa7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Rnf14Q9JI90 485 aa7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Cpsf3Q9QXK7 684 aa7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 HnrnpcQ9Z204 313 aaKnown RBP7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Crlf3Q9Z2L7 442 aa7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 SktA2AQ25 1946 aaKnown RBP7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Sbno2Q7TNB8 1349 aa7.45□□□□□ -1.22
Clrn1-202ENSMUST00000055636 AspgA0JNU3 564 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ttc17E9PVB5 1198 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Vmn2r103E9PWW0 856 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Efna5O08543 228 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 BtkP35991 659 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Hsd17b2P51658 381 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Rad54lP70270 747 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 CiitaP79621 1155 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Muc1Q02496 630 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Glt6d1Q2NKH9 311 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Hace1Q3U0D9 909 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Gm1587Q3UT80 123 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Fam198aQ3UY90 562 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Kctd8Q50H33 476 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Abi3bpQ59IW6 1179 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Acvrl1Q61288 502 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ugt1a1Q63886 535 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ptk6Q64434 451 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Chsy1Q6ZQ11 800 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Acap2Q6ZQK5 770 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 RfflQ6ZQM0 377 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Olfr392Q7TRX6 312 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Aoc2Q812C9 757 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Suds3Q8BR65 328 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Q8CD60 292 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Zfp263Q8CF60 680 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Tph2Q8CGV2 488 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Vps37bQ8R0J7 285 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Znf426Q8R1D1 550 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Olfr385Q8VGT1 312 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Setd3Q91WC0 594 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Nsmce3Q9CPR8 279 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Q9CPS8 106 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 TtpalQ9D3D0 343 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Rsph3bQ9DA80 389 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ropn1Q9ESG2 212 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Cacng4Q9JJV4 327 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Pdk2Q9JK42 407 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Rfx5Q9JL61 658 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Znhit2Q9QY66 399 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Actl7bQ9QY83 418 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Efcab12V9GXH0 673 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Fndc3c1Q6DFV6 1356 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 2210011C24RikA0A087WQ89 206 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Plekhg4A0A1L1SU27 1217 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Gm12394A2AKP6 982 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ccdc13D3YV10 709 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Gm3415J3QMS8 315 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Tnfrsf18O35714 228 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Dnase1l3O55070 310 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ppargc1aO70343 797 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Shoc2O88520 582 aaKnown RBP7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 PrkchP23298 683 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 IppP28575 584 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Tfap2aP34056 437 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Pdcd2P46718 343 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Pms2P54279 859 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Cyth2P63034 400 aaKnown RBP7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Tbx3P70324 741 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Prdx5P99029 210 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Pou2f2Q00196 463 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Serpina1eQ00898 413 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 VcpQ01853 806 aaKnown RBP7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Ubn1Q4G0F8 1135 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Stxbp5lQ5DQR4 1185 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Samhd1Q60710 627 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Bcar1Q61140 874 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Zfp90Q61967 636 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Arl13bQ640N2 427 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Mysm1Q69Z66 819 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Hmgb4Q6P8W9 181 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 2700097O09RikQ6PGK3 301 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 PoliQ6R3M4 717 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Rpf1Q7TND5 349 aaKnown RBP7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 NfascQ810U3 1240 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Apol7cQ8C6E1 369 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Kct2Q8K201 259 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Fam151aQ8QZW3 608 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Hdhd5Q91WM2 419 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 NelfcdQ922L6 591 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Taf11Q99JX1 211 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Gps1Q99LD4 471 aaKnown RBP7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Kdm8Q9CXT6 414 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Mxra7Q9CZH7 178 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 AenQ9CZI9 336 aaKnown RBP7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Gm3404Q9D506 307 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Igdcc4Q9EQS9 1252 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Cul3Q9JLV5 768 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Sgk1Q9WVC6 431 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Anapc7Q9WVM3 565 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Cdc42ep5Q9Z0X0 150 aa7.44□□□□□ -1.22
Clrn1-202ENSMUST00000055636 Trpm7Q923J1 1863 aa7.44□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms