RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Elk4P41158 430 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tdpoz2Q717B2 364 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pde10aQ8CA95 790 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 CmasQ99KK2 432 aaKnown RBP17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Zdhhc13Q9CWU2 622 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ttc30a2A2AKQ8 664 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 1700018F24RikB2RW27 314 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gm5160F8VPN3 147 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ino80dQ66JY2 873 aaKnown RBP17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tmem132dQ76HP3 1097 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Usp6nlQ80XC3 819 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Phka2Q8BWJ3 1235 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tmem221Q8K071 230 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ubap2Q91VX2 1132 aaKnown RBP17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ces1fQ91WU0 561 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ttc30a1Q99J38 664 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Bcs1lQ9CZP5 418 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Bbs5Q9CZQ9 341 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Poc5Q9DBS8 558 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ccr10Q9JL21 362 aa17.51■□□□□ 0.39
Ctcf-201ENSMUST00000005841 PiggD3Z3Y1 983 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Zfp94E9Q6Y4 486 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Casp7P97864 303 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Dsg1aQ61495 1057 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Sox11Q7M6Y2 395 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ckap2lQ7TS74 745 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tbc1d22aQ8R5A6 516 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tekt2Q922G7 430 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mrpl17Q9D8P4 176 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Zmynd8A2A484 1235 aaKnown RBP17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 KitP05532 979 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 UmpsP13439 481 aaKnown RBP17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Slfn4Q3UV66 602 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pcdhga7Q6DD96 935 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Vmn2r43Q80Z08 845 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Zfp438Q8BFX2 798 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tas1r2Q925I4 843 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mtfr1Q99MB2 328 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Trem2Q99NH8 227 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 4921524L21RikQ9D5T2 438 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Hic1Q9R1Y5 733 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ambra1A2AH22 1300 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Pcsk6F6XJP7 959 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Csrp3P50462 194 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Fbp2P70695 339 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tpp2Q64514 1262 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Arhgap25Q8BYW1 648 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 GldcQ91W43 1025 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Trim7Q923T7 510 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cetn2Q9R1K9 172 aa17.5■□□□□ 0.39
Ctcf-201ENSMUST00000005841 MutP16332 748 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cyth2P63034 400 aaKnown RBP17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Proser1Q5PRE5 913 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Olfr295Q7TS08 309 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Rab15Q8K386 212 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Col23a1Q8K4G2 532 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Vps37bQ8R0J7 285 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Eid1Q9DCR4 169 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Kcnq4Q9JK97 696 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 RpgrQ9R0X5 1001 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Nup210lQ9D2F7 1881 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 A0A1Y7VP24 259 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup10A2BIN1 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup14A2CEK7 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup19A9C497 187 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup15A9R9W0 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup17B5X0G2 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup8E9PVW0 235 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup7E9QA79 235 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gm3424L7N298 263 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Gm8246M0QWX9 263 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup6P02762 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup1P11588 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mup2P11589 180 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Q3TQQ9 903 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Klhl23Q6GQU2 558 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Nsun6Q7TS68 476 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Rilpl1Q9JJC6 406 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tmod4Q9JLH8 345 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Dcun1d1Q9QZ73 259 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Cyp2b10P12791 500 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Grid2ipQ0QWG9 1203 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Entpd3Q8BFW6 529 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ppp1r12bQ8BG95 976 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Taf5Q8C092 801 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Arhgap29Q8CGF1 1266 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 1700080O16RikQ9D9G4 284 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Actrt2Q9D9L5 377 aa17.49■□□□□ 0.39
Ctcf-201ENSMUST00000005841 EsrraO08580 422 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Slc10a3P21129 473 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 ProcrQ64695 242 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Sort1Q6PHU5 825 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Mapk15Q80Y86 549 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Atg16l1Q8C0J2 607 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Zfp236S4R299 1847 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Map7d3A2AEY4 876 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Ssxb9A2BI93 185 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 AfmO89020 608 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Vti1aO89116 217 aa17.48■□□□□ 0.39
Ctcf-201ENSMUST00000005841 Tfdp1Q08639 410 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms