RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	QDR2	P40474	542 aa		4.83	□□□□□ -1.64
YPR039W	YPR039W	PRK1	P40494	810 aa		4.83	□□□□□ -1.64
YPR039W	YPR039W	PRY1	P47032	299 aa		4.83	□□□□□ -1.64
YPR039W	YPR039W	SBP1	P10080	294 aa	Known RBP	4.82	□□□□□ -1.64
YPR039W	YPR039W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
YPR039W	YPR039W	SCD5	P34758	872 aa		4.82	□□□□□ -1.64
YPR039W	YPR039W	SKP1	P52286	194 aa		4.82	□□□□□ -1.64
YPR039W	YPR039W	PGM2	P37012	569 aa	Known RBP	4.81	□□□□□ -1.64
YPR039W	YPR039W	NCL1	P38205	684 aa	Known RBP	4.81	□□□□□ -1.64
YPR039W	YPR039W	FOX2	Q02207	900 aa	Known RBP	4.81	□□□□□ -1.64
YPR039W	YPR039W	UTP4	Q06679	776 aa	Known RBP	4.81	□□□□□ -1.64
YPR039W	YPR039W	MRP10	O75012	95 aa		4.8	□□□□□ -1.64
YPR039W	YPR039W	RPP1A	P05318	106 aa	Predicted RBP	4.8	□□□□□ -1.64
YPR039W	YPR039W	RPC31	P17890	251 aa		4.8	□□□□□ -1.64
YPR039W	YPR039W	PUP1	P25043	261 aa		4.8	□□□□□ -1.64
YPR039W	YPR039W	HEH2	Q03281	663 aa		4.8	□□□□□ -1.64
YPR039W	YPR039W	CAB1	Q04430	367 aa		4.8	□□□□□ -1.64
YPR039W	YPR039W	TAT1	P38085	619 aa		4.79	□□□□□ -1.64
YPR039W	YPR039W	ALG14	P38242	237 aa		4.79	□□□□□ -1.64
YPR039W	YPR039W	AMN1	P38285	549 aa	Predicted RBP	4.79	□□□□□ -1.64
YPR039W	YPR039W	APM2	P38700	605 aa		4.79	□□□□□ -1.64
YPR039W	YPR039W	LSB6	P42951	607 aa		4.79	□□□□□ -1.64
YPR039W	YPR039W	NAR1	P23503	491 aa	Known RBP	4.78	□□□□□ -1.64
YPR039W	YPR039W	VMA3	P25515	160 aa		4.78	□□□□□ -1.64
YPR039W	YPR039W	YBR197C	P38306	217 aa		4.78	□□□□□ -1.64
YPR039W	YPR039W	CWH41	P53008	833 aa		4.78	□□□□□ -1.64
YPR039W	YPR039W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
YPR039W	YPR039W	TRS33	Q99394	268 aa		4.78	□□□□□ -1.64
YPR039W	YPR039W	ITC1	P53125	1264 aa		4.77	□□□□□ -1.65
YPR039W	YPR039W	YML083C	Q04526	418 aa		4.77	□□□□□ -1.65
YPR039W	YPR039W	GAS5	Q08193	484 aa		4.77	□□□□□ -1.65
YPR039W	YPR039W	NHA1	Q99271	985 aa		4.77	□□□□□ -1.65
YPR039W	YPR039W	MRPL33	P20084	86 aa		4.76	□□□□□ -1.65
YPR039W	YPR039W	IDI1	P15496	288 aa		4.75	□□□□□ -1.65
YPR039W	YPR039W	BSD2	P38356	321 aa		4.75	□□□□□ -1.65
YPR039W	YPR039W	TPS3	P38426	1054 aa	Known RBP	4.75	□□□□□ -1.65
YPR039W	YPR039W	BUD9	P53226	547 aa		4.75	□□□□□ -1.65
YPR039W	YPR039W	GIS4	Q04233	774 aa		4.75	□□□□□ -1.65
YPR039W	YPR039W	PUN1	Q06991	263 aa		4.75	□□□□□ -1.65
YPR039W	YPR039W	GLT1	Q12680	2145 aa	Known RBP	4.75	□□□□□ -1.65
YPR039W	YPR039W	ISC10	P32645	267 aa		4.74	□□□□□ -1.65
YPR039W	YPR039W	ALD4	P46367	519 aa	Known RBP	4.74	□□□□□ -1.65
YPR039W	YPR039W	YPL034W	Q03083	165 aa		4.73	□□□□□ -1.65
YPR039W	YPR039W	NOB1	Q08444	459 aa	Known RBP	4.73	□□□□□ -1.65
YPR039W	YPR039W	RRM3	P38766	723 aa		4.72	□□□□□ -1.65
YPR039W	YPR039W	DYS1	P38791	387 aa		4.72	□□□□□ -1.65
YPR039W	YPR039W	YOR296W	Q08748	1289 aa		4.72	□□□□□ -1.65
YPR039W	YPR039W	LDH1	P38139	375 aa		4.7	□□□□□ -1.66
YPR039W	YPR039W	GIP1	P38229	639 aa		4.7	□□□□□ -1.66
YPR039W	YPR039W	YJL181W	P46987	611 aa		4.7	□□□□□ -1.66
YPR039W	YPR039W	MSN1	P22148	382 aa		4.69	□□□□□ -1.66
YPR039W	YPR039W	YER156C	P40093	338 aa	Known RBP	4.69	□□□□□ -1.66
YPR039W	YPR039W	TED1	P40533	473 aa		4.69	□□□□□ -1.66
YPR039W	YPR039W	ALO1	P54783	526 aa	Known RBP	4.69	□□□□□ -1.66
YPR039W	YPR039W	CWC15	Q03772	175 aa	Known RBP	4.68	□□□□□ -1.66
YPR039W	YPR039W	PUF6	Q04373	656 aa	Known RBP	4.68	□□□□□ -1.66
YPR039W	YPR039W	AI3	P03877	415 aa		4.67	□□□□□ -1.66
YPR039W	YPR039W	SRS2	P12954	1174 aa		4.67	□□□□□ -1.66
YPR039W	YPR039W	ISW1	P38144	1129 aa		4.67	□□□□□ -1.66
YPR039W	YPR039W	YIL165C	P40446	119 aa		4.67	□□□□□ -1.66
YPR039W	YPR039W	SOK2	P53438	785 aa	Predicted RBP	4.67	□□□□□ -1.66
YPR039W	YPR039W	SAC7	P17121	654 aa		4.66	□□□□□ -1.66
YPR039W	YPR039W	SSA4	P22202	642 aa	Known RBP	4.66	□□□□□ -1.66
YPR039W	YPR039W	BOI1	P38041	980 aa	Known RBP	4.66	□□□□□ -1.66
YPR039W	YPR039W	GIP2	P40036	548 aa		4.66	□□□□□ -1.66
YPR039W	YPR039W	PPT1	P53043	513 aa		4.66	□□□□□ -1.66
YPR039W	YPR039W	EMG1	Q06287	252 aa	Known RBP	4.66	□□□□□ -1.66
YPR039W	YPR039W	TY4B-P	A0A0B7P3V8	1104 aa		4.65	□□□□□ -1.67
YPR039W	YPR039W	MAC1	P35192	417 aa		4.65	□□□□□ -1.67
YPR039W	YPR039W	SUT1	P53032	299 aa	Known RBP	4.65	□□□□□ -1.67
YPR039W	YPR039W	PNP1	Q05788	311 aa		4.65	□□□□□ -1.67
YPR039W	YPR039W	TY4A-H	Q6Q5P6	413 aa		4.65	□□□□□ -1.67
YPR039W	YPR039W	KTR2	P33550	425 aa		4.64	□□□□□ -1.67
YPR039W	YPR039W	HXT8	P40886	569 aa		4.64	□□□□□ -1.67
YPR039W	YPR039W	RGD2	P43556	714 aa		4.63	□□□□□ -1.67
YPR039W	YPR039W	ARI1	P53111	347 aa	Known RBP	4.63	□□□□□ -1.67
YPR039W	YPR039W	RPB10	P22139	70 aa		4.62	□□□□□ -1.67
YPR039W	YPR039W	SFA1	P32771	386 aa		4.62	□□□□□ -1.67
YPR039W	YPR039W	OMA1	P36163	345 aa		4.62	□□□□□ -1.67
YPR039W	YPR039W	INP51	P40559	946 aa	Known RBP	4.62	□□□□□ -1.67
YPR039W	YPR039W	RSC2	Q06488	889 aa		4.62	□□□□□ -1.67
YPR039W	YPR039W	NAM7	P30771	971 aa	Known RBP	4.61	□□□□□ -1.67
YPR039W	YPR039W	RRN6	P32786	894 aa		4.61	□□□□□ -1.67
YPR039W	YPR039W	PGM1	P33401	570 aa	Known RBP	4.61	□□□□□ -1.67
YPR039W	YPR039W	TFA2	P36145	328 aa		4.61	□□□□□ -1.67
YPR039W	YPR039W	AIM46	P38885	310 aa		4.61	□□□□□ -1.67
YPR039W	YPR039W	FIR1	P40020	876 aa		4.61	□□□□□ -1.67
YPR039W	YPR039W	SLP1	Q12232	587 aa		4.61	□□□□□ -1.67
YPR039W	YPR039W	TY1A-NL1	Q12391	440 aa	Known RBP	4.61	□□□□□ -1.67
YPR039W	YPR039W	TRP3	P00937	484 aa		4.6	□□□□□ -1.67
YPR039W	YPR039W	BOL3	P39724	118 aa		4.59	□□□□□ -1.67
YPR039W	YPR039W	INP52	P50942	1183 aa		4.59	□□□□□ -1.67
YPR039W	YPR039W	BIO5	P53744	561 aa	Known RBP	4.59	□□□□□ -1.67
YPR039W	YPR039W	ALD3	P54114	506 aa		4.59	□□□□□ -1.67
YPR039W	YPR039W	SUB2	Q07478	446 aa	Known RBP	4.59	□□□□□ -1.67
YPR039W	YPR039W	APC11	Q12157	165 aa		4.59	□□□□□ -1.67
YPR039W	YPR039W	RLF2	Q12495	606 aa		4.59	□□□□□ -1.67
YPR039W	YPR039W	RSC6	P25632	483 aa		4.58	□□□□□ -1.68
YPR039W	YPR039W	COQ2	P32378	372 aa		4.58	□□□□□ -1.68
YPR039W	YPR039W	PAN5	P38787	379 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms