RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP15	YMR304W	ECM16	Q04217	1267 aa	Known RBP	3.08	□□□□□ -1.92
UBP15	YMR304W	NHA1	Q99271	985 aa		3.08	□□□□□ -1.92
UBP15	YMR304W	FAS2	P19097	1887 aa	Known RBP	3.08	□□□□□ -1.92
UBP15	YMR304W	GSC2	P40989	1895 aa		3.08	□□□□□ -1.92
UBP15	YMR304W	LEO1	P38439	464 aa		3.07	□□□□□ -1.92
UBP15	YMR304W	ISM1	P48526	1002 aa		3.07	□□□□□ -1.92
UBP15	YMR304W	ATG20	Q07528	640 aa		3.07	□□□□□ -1.92
UBP15	YMR304W	GRX1	P25373	110 aa	Known RBP	3.07	□□□□□ -1.92
UBP15	YMR304W	MVP1	P40959	511 aa	Known RBP	3.07	□□□□□ -1.92
UBP15	YMR304W	HIF1	Q12373	385 aa		3.07	□□□□□ -1.92
UBP15	YMR304W	PRT1	P06103	763 aa	Known RBP	3.07	□□□□□ -1.92
UBP15	YMR304W	MOT2	P34909	587 aa	Known RBP	3.07	□□□□□ -1.92
UBP15	YMR304W	MTR4	P47047	1073 aa	Known RBP	3.07	□□□□□ -1.92
UBP15	YMR304W	YJR008W	P47085	338 aa		3.07	□□□□□ -1.92
UBP15	YMR304W	SAS4	Q04003	481 aa		3.07	□□□□□ -1.92
UBP15	YMR304W	RPS9A	O13516	197 aa	Known RBP	3.06	□□□□□ -1.92
UBP15	YMR304W	STR2	P47164	639 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	RAS1	P01119	309 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	BUD20	Q08004	166 aa	Predicted RBP	3.06	□□□□□ -1.92
UBP15	YMR304W	YEL077C	Q3E7X8	1277 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	RGR1	P19263	1082 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	PRP45	P28004	379 aa	Predicted RBP	3.06	□□□□□ -1.92
UBP15	YMR304W	POL31	P46957	487 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	YNL011C	P53980	444 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	ECM30	Q06673	1274 aa		3.06	□□□□□ -1.92
UBP15	YMR304W	GAP1	P19145	602 aa	Predicted RBP	3.05	□□□□□ -1.92
UBP15	YMR304W	MRF1	P30775	413 aa	Predicted RBP	3.05	□□□□□ -1.92
UBP15	YMR304W	RME1	P32338	300 aa	Known RBP	3.05	□□□□□ -1.92
UBP15	YMR304W	AUS1	Q08409	1394 aa		3.05	□□□□□ -1.92
UBP15	YMR304W	TAF5	P38129	798 aa		3.05	□□□□□ -1.92
UBP15	YMR304W	TIM50	Q02776	476 aa		3.05	□□□□□ -1.92
UBP15	YMR304W	IKI3	Q06706	1349 aa	Known RBP	3.05	□□□□□ -1.92
UBP15	YMR304W	ERG12	P07277	443 aa		3.05	□□□□□ -1.92
UBP15	YMR304W	MSM1	P22438	575 aa		3.05	□□□□□ -1.92
UBP15	YMR304W	ALD4	P46367	519 aa	Known RBP	3.05	□□□□□ -1.92
UBP15	YMR304W	DMA2	P53924	522 aa		3.05	□□□□□ -1.92
UBP15	YMR304W	FBP1	P09201	348 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	ERO1	Q03103	563 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	YRF1-4	O13559	1382 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	PET111	P08468	800 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	AMS1	P22855	1083 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	SQS1	P53866	767 aa	Known RBP	3.04	□□□□□ -1.92
UBP15	YMR304W	SLM3	Q12093	417 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	PPH3	P32345	308 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	MNN4	P36044	1178 aa		3.04	□□□□□ -1.92
UBP15	YMR304W	MPP10	P47083	593 aa	Known RBP	3.04	□□□□□ -1.92
UBP15	YMR304W	YKL133C	P36066	463 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	CWC15	Q03772	175 aa	Known RBP	3.03	□□□□□ -1.92
UBP15	YMR304W	RRP15	Q06511	250 aa	Predicted RBP	3.03	□□□□□ -1.92
UBP15	YMR304W	YOL087C	Q99247	1116 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	LYS2	P07702	1392 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	KEX2	P13134	814 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	PAT1	P25644	796 aa	Known RBP	3.03	□□□□□ -1.92
UBP15	YMR304W	BRN1	P38170	754 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	DSF2	P38213	736 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	RRN7	P40992	514 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	EAF6	P47128	113 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	YRM1	Q12340	786 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	RAD50	P12753	1312 aa		3.03	□□□□□ -1.92
UBP15	YMR304W	PSE1	P32337	1089 aa	Known RBP	3.03	□□□□□ -1.93
UBP15	YMR304W	APL5	Q08951	932 aa	Known RBP	3.03	□□□□□ -1.93
UBP15	YMR304W	YMR084W	A2P2R3	262 aa		3.02	□□□□□ -1.93
UBP15	YMR304W	RTS3	P53289	263 aa		3.02	□□□□□ -1.93
UBP15	YMR304W	MLP1	Q02455	1875 aa	Known RBP	3.02	□□□□□ -1.93
UBP15	YMR304W	CPS1	P27614	576 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	CLB5	P30283	435 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	KIN4	Q01919	800 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	HSP82	P02829	709 aa	Known RBP	3.01	□□□□□ -1.93
UBP15	YMR304W	CLC1	P17891	233 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	TBS1	P38114	1094 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	TEA1	P47988	759 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	VID30	P53076	958 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	HEL2	Q05580	639 aa	Known RBP	3.01	□□□□□ -1.93
UBP15	YMR304W	RTC1	Q08281	1341 aa		3.01	□□□□□ -1.93
UBP15	YMR304W	APE3	P37302	537 aa	Known RBP	3.01	□□□□□ -1.93
UBP15	YMR304W	BMS1	Q08965	1183 aa	Known RBP	3.01	□□□□□ -1.93
UBP15	YMR304W	TUS1	Q06412	1307 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-DR4	O74302	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-H	P0C2I4	478 aa	Known RBP	3	□□□□□ -1.93
UBP15	YMR304W	TY1A-A	P0CX57	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-PR1	P0CX58	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-OR	P0CX59	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-PR2	P0CX60	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-DR5	P0CX65	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-ER2	P0CX66	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-GR3	P0CX67	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-LR1	P0CX68	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-MR2	P0CX69	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-JR2	P47099	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-DR1	Q03856	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-ML1	Q04706	440 aa	Known RBP	3	□□□□□ -1.93
UBP15	YMR304W	ARR2	Q06597	130 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-BR	Q12217	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-NL2	Q12470	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	TY1A-GR2	Q12485	440 aa		3	□□□□□ -1.93
UBP15	YMR304W	SEC2	P17065	759 aa		3	□□□□□ -1.93
UBP15	YMR304W	DIT2	P21595	489 aa		3	□□□□□ -1.93
UBP15	YMR304W	FPR3	P38911	411 aa	Known RBP	3	□□□□□ -1.93
UBP15	YMR304W	SNF7	P39929	240 aa	Known RBP	3	□□□□□ -1.93
UBP15	YMR304W	UBX2	Q04228	584 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms