RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C HXT8P40886 569 aa6.4□□□□□ -1.38
VPS71YML041C SUT1P53032 299 aaKnown RBP6.4□□□□□ -1.38
VPS71YML041C RMD1Q03441 430 aa6.4□□□□□ -1.38
VPS71YML041C TOS4Q06266 489 aa6.4□□□□□ -1.38
VPS71YML041C GAR1P28007 205 aaKnown RBP6.39□□□□□ -1.39
VPS71YML041C SMC1P32908 1225 aa6.39□□□□□ -1.39
VPS71YML041C RPT1P33299 467 aaKnown RBP6.39□□□□□ -1.39
VPS71YML041C RGD2P43556 714 aa6.39□□□□□ -1.39
VPS71YML041C Q0182Q9ZZW1 134 aa6.39□□□□□ -1.39
VPS71YML041C YTA7P40340 1379 aa6.39□□□□□ -1.39
VPS71YML041C SHM1P37292 490 aaPredicted RBP6.38□□□□□ -1.39
VPS71YML041C DLD3P39976 496 aaKnown RBP6.38□□□□□ -1.39
VPS71YML041C NTA1P40354 457 aa6.38□□□□□ -1.39
VPS71YML041C PTK2P47116 818 aaKnown RBP6.38□□□□□ -1.39
VPS71YML041C MSN5P52918 1224 aa6.38□□□□□ -1.39
VPS71YML041C SPR28Q04921 423 aa6.38□□□□□ -1.39
VPS71YML041C GCD6P32501 712 aaKnown RBP6.37□□□□□ -1.39
VPS71YML041C SLA1P32790 1244 aa6.37□□□□□ -1.39
VPS71YML041C LDH1P38139 375 aa6.37□□□□□ -1.39
VPS71YML041C NNF1P47149 201 aa6.37□□□□□ -1.39
VPS71YML041C YDR444WQ04093 687 aa6.37□□□□□ -1.39
VPS71YML041C HXK1P04806 485 aaKnown RBP6.36□□□□□ -1.39
VPS71YML041C MSN1P22148 382 aa6.36□□□□□ -1.39
VPS71YML041C SAM37P50110 327 aa6.36□□□□□ -1.39
VPS71YML041C YGR122WP53272 402 aa6.36□□□□□ -1.39
VPS71YML041C JIP5Q06214 492 aaPredicted RBP6.36□□□□□ -1.39
VPS71YML041C CYC8P14922 966 aa6.35□□□□□ -1.39
VPS71YML041C RPC31P17890 251 aa6.35□□□□□ -1.39
VPS71YML041C NAP1P25293 417 aaKnown RBP6.35□□□□□ -1.39
VPS71YML041C MLF3P32047 452 aa6.35□□□□□ -1.39
VPS71YML041C NAB2P32505 525 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
VPS71YML041C DYS1P38791 387 aa6.35□□□□□ -1.39
VPS71YML041C QDR2P40474 542 aa6.35□□□□□ -1.39
VPS71YML041C AAD14P42884 376 aa6.35□□□□□ -1.39
VPS71YML041C VPS16Q03308 798 aa6.35□□□□□ -1.39
VPS71YML041C LCB5Q06147 687 aaKnown RBP6.35□□□□□ -1.39
VPS71YML041C PIN2Q12057 282 aa6.35□□□□□ -1.39
VPS71YML041C KAP122P32767 1081 aa6.34□□□□□ -1.39
VPS71YML041C RPS26AP39938 119 aaKnown RBP6.34□□□□□ -1.39
VPS71YML041C RPS26BP39939 119 aaKnown RBP6.34□□□□□ -1.39
VPS71YML041C JJJ2P46997 583 aa6.34□□□□□ -1.39
VPS71YML041C SRF1Q12516 437 aa6.34□□□□□ -1.39
VPS71YML041C DAL1P32375 460 aa6.33□□□□□ -1.4
VPS71YML041C IRS4P36115 615 aaKnown RBP6.33□□□□□ -1.4
VPS71YML041C RAD55P38953 406 aa6.33□□□□□ -1.4
VPS71YML041C ALD3P54114 506 aa6.33□□□□□ -1.4
VPS71YML041C YPL062WQ02781 134 aa6.33□□□□□ -1.4
VPS71YML041C NOC3Q07896 663 aaPredicted RBP6.33□□□□□ -1.4
VPS71YML041C TY1A-DR3Q12441 440 aa6.33□□□□□ -1.4
VPS71YML041C TIF6Q12522 245 aaKnown RBP6.33□□□□□ -1.4
VPS71YML041C ARG82P07250 355 aa6.32□□□□□ -1.4
VPS71YML041C LEU1P07264 779 aaKnown RBP6.32□□□□□ -1.4
VPS71YML041C PSY2P40164 858 aa6.32□□□□□ -1.4
VPS71YML041C VTC4P47075 721 aa6.32□□□□□ -1.4
VPS71YML041C BSC2Q05611 235 aa6.32□□□□□ -1.4
VPS71YML041C FLP1P03870 423 aa6.31□□□□□ -1.4
VPS71YML041C GBP2P25555 427 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
VPS71YML041C IRE1P32361 1115 aa6.31□□□□□ -1.4
VPS71YML041C CIC1P38779 376 aaKnown RBP6.31□□□□□ -1.4
VPS71YML041C NUP85P46673 744 aa6.31□□□□□ -1.4
VPS71YML041C CTR9P89105 1077 aa6.31□□□□□ -1.4
VPS71YML041C RAD2P07276 1031 aa6.3□□□□□ -1.4
VPS71YML041C MNR2P35724 969 aa6.3□□□□□ -1.4
VPS71YML041C FAA3P39002 694 aa6.3□□□□□ -1.4
VPS71YML041C ALA1P40825 983 aaKnown RBP6.3□□□□□ -1.4
VPS71YML041C SKP1P52286 194 aa6.3□□□□□ -1.4
VPS71YML041C ESF1Q06344 628 aaKnown RBP6.3□□□□□ -1.4
VPS71YML041C YOR296WQ08748 1289 aa6.3□□□□□ -1.4
VPS71YML041C PSH1Q12161 406 aa6.3□□□□□ -1.4
VPS71YML041C COBP00163 385 aa6.29□□□□□ -1.4
VPS71YML041C PDC6P26263 563 aaKnown RBP6.29□□□□□ -1.4
VPS71YML041C DUR3P33413 735 aa6.29□□□□□ -1.4
VPS71YML041C BSD2P38356 321 aa6.29□□□□□ -1.4
VPS71YML041C ALD6P54115 500 aaKnown RBP6.29□□□□□ -1.4
VPS71YML041C YCS4Q06156 1176 aa6.29□□□□□ -1.4
VPS71YML041C OPT2Q06593 877 aa6.29□□□□□ -1.4
VPS71YML041C OXR1Q08952 273 aa6.29□□□□□ -1.4
VPS71YML041C ISW1P38144 1129 aa6.28□□□□□ -1.4
VPS71YML041C GIP1P38229 639 aa6.28□□□□□ -1.4
VPS71YML041C VAC8P39968 578 aa6.28□□□□□ -1.4
VPS71YML041C FIR1P40020 876 aa6.28□□□□□ -1.4
VPS71YML041C INP54Q08227 384 aaKnown RBP6.28□□□□□ -1.4
VPS71YML041C YDL176WQ12027 708 aa6.28□□□□□ -1.4
VPS71YML041C YPL109CQ02981 657 aa6.27□□□□□ -1.41
VPS71YML041C FPR4Q06205 392 aaPredicted RBP6.27□□□□□ -1.41
VPS71YML041C EMG1Q06287 252 aaKnown RBP6.27□□□□□ -1.41
VPS71YML041C YOL098CQ12496 1037 aa6.27□□□□□ -1.41
VPS71YML041C DLD1P32891 587 aa6.26□□□□□ -1.41
VPS71YML041C PRP40P33203 583 aaKnown RBP6.26□□□□□ -1.41
VPS71YML041C YJR098CP47139 656 aa6.26□□□□□ -1.41
VPS71YML041C MSH6Q03834 1242 aa6.26□□□□□ -1.41
VPS71YML041C DAL4Q04895 635 aa6.26□□□□□ -1.41
VPS71YML041C CLN2P20438 545 aa6.25□□□□□ -1.41
VPS71YML041C PRE9P23638 258 aaKnown RBP6.25□□□□□ -1.41
VPS71YML041C PEP7P32609 515 aa6.25□□□□□ -1.41
VPS71YML041C DUT1P33317 147 aa6.25□□□□□ -1.41
VPS71YML041C YTA6P40328 754 aa6.25□□□□□ -1.41
VPS71YML041C YIL165CP40446 119 aa6.25□□□□□ -1.41
VPS71YML041C MAD1P40957 749 aa6.25□□□□□ -1.41
VPS71YML041C IOC3P43596 787 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms