RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C TOS4Q06266 489 aa12.38□□□□□ -0.43
YSR3YKR053C JJJ2P46997 583 aa12.37□□□□□ -0.43
YSR3YKR053C WRS1Q12109 432 aaKnown RBP12.37□□□□□ -0.43
YSR3YKR053C ETP1P38748 585 aaKnown RBP12.36□□□□□ -0.43
YSR3YKR053C SEN54Q02825 467 aaPredicted RBP12.36□□□□□ -0.43
YSR3YKR053C ACK1Q07622 623 aaPredicted RBP12.36□□□□□ -0.43
YSR3YKR053C TYW1Q08960 810 aaKnown RBP12.36□□□□□ -0.43
YSR3YKR053C GYP5Q12344 894 aa12.36□□□□□ -0.43
YSR3YKR053C HKR1P41809 1802 aa12.35□□□□□ -0.43
YSR3YKR053C SPO1P53541 631 aa12.35□□□□□ -0.43
YSR3YKR053C CWC15Q03772 175 aaKnown RBP12.35□□□□□ -0.43
YSR3YKR053C SEC18P18759 758 aaKnown RBP12.34□□□□□ -0.43
YSR3YKR053C RPS7AP26786 190 aaKnown RBP12.34□□□□□ -0.43
YSR3YKR053C FAS2P19097 1887 aaKnown RBP12.34□□□□□ -0.43
YSR3YKR053C GLO3P38682 493 aaKnown RBP12.32□□□□□ -0.44
YSR3YKR053C UTP7P40055 554 aaKnown RBP12.32□□□□□ -0.44
YSR3YKR053C YFH7P43591 353 aa12.32□□□□□ -0.44
YSR3YKR053C PIF1P07271 859 aa12.3□□□□□ -0.44
YSR3YKR053C SLA1P32790 1244 aa12.3□□□□□ -0.44
YSR3YKR053C MTC3P53077 123 aa12.3□□□□□ -0.44
YSR3YKR053C CBP1P07252 654 aa12.29□□□□□ -0.44
YSR3YKR053C RPT3P33298 428 aaKnown RBP12.29□□□□□ -0.44
YSR3YKR053C ILV3P39522 585 aaKnown RBP12.29□□□□□ -0.44
YSR3YKR053C YJL171CP46992 396 aa12.29□□□□□ -0.44
YSR3YKR053C NCB2Q92317 146 aa12.29□□□□□ -0.44
YSR3YKR053C AI2P03876 854 aa12.28□□□□□ -0.44
YSR3YKR053C HAL5P38970 855 aaKnown RBP12.28□□□□□ -0.44
YSR3YKR053C YNL193WP53870 558 aa12.28□□□□□ -0.44
YSR3YKR053C RRI2Q12348 645 aa12.28□□□□□ -0.44
YSR3YKR053C RRT6P53117 311 aaPredicted RBP12.27□□□□□ -0.45
YSR3YKR053C DUS1P53759 423 aaKnown RBP12.27□□□□□ -0.45
YSR3YKR053C PUF6Q04373 656 aaKnown RBP12.27□□□□□ -0.45
YSR3YKR053C TFA1P36100 482 aa12.26□□□□□ -0.45
YSR3YKR053C POL32P47110 350 aa12.26□□□□□ -0.45
YSR3YKR053C PUS6P53294 404 aa12.26□□□□□ -0.45
YSR3YKR053C RPN7Q06103 429 aaKnown RBP12.26□□□□□ -0.45
YSR3YKR053C SNF3P10870 884 aa12.25□□□□□ -0.45
YSR3YKR053C YIR042CP40586 236 aa12.25□□□□□ -0.45
YSR3YKR053C INM2Q05533 292 aa12.25□□□□□ -0.45
YSR3YKR053C PTK1P36002 662 aaPredicted RBP12.24□□□□□ -0.45
YSR3YKR053C BSD2P38356 321 aa12.24□□□□□ -0.45
YSR3YKR053C NIT1P40447 199 aa12.24□□□□□ -0.45
YSR3YKR053C APL6P46682 809 aa12.24□□□□□ -0.45
YSR3YKR053C AAD16Q02895 342 aa12.24□□□□□ -0.45
YSR3YKR053C HVG1P0CE11 249 aa12.23□□□□□ -0.45
YSR3YKR053C FUN12P39730 1002 aaKnown RBP12.23□□□□□ -0.45
YSR3YKR053C CSR2Q12734 1121 aa12.23□□□□□ -0.45
YSR3YKR053C YGL242CP53066 181 aa12.22□□□□□ -0.45
YSR3YKR053C CYB2P00175 591 aa12.21□□□□□ -0.45
YSR3YKR053C GAL2P13181 574 aa12.21□□□□□ -0.45
YSR3YKR053C PCS60P38137 543 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
YSR3YKR053C NMD2P38798 1089 aaKnown RBP12.21□□□□□ -0.45
YSR3YKR053C TIF6Q12522 245 aaKnown RBP12.21□□□□□ -0.45
YSR3YKR053C MDL2P33311 773 aa12.2□□□□□ -0.46
YSR3YKR053C PNT1P38969 423 aa12.2□□□□□ -0.46
YSR3YKR053C KTR3P38130 404 aaPredicted RBP12.19□□□□□ -0.46
YSR3YKR053C SRF1Q12516 437 aa12.19□□□□□ -0.46
YSR3YKR053C MLC1P53141 149 aa12.18□□□□□ -0.46
YSR3YKR053C CST9Q06032 482 aa12.18□□□□□ -0.46
YSR3YKR053C NOT3P06102 836 aaKnown RBP12.17□□□□□ -0.46
YSR3YKR053C NPL4P33755 580 aa12.17□□□□□ -0.46
YSR3YKR053C GEF1P37020 779 aa12.17□□□□□ -0.46
YSR3YKR053C BOI1P38041 980 aaKnown RBP12.17□□□□□ -0.46
YSR3YKR053C BDP1P46678 594 aa12.16□□□□□ -0.46
YSR3YKR053C PDR18P53756 1333 aa12.15□□□□□ -0.46
YSR3YKR053C RAD53P22216 821 aa12.15□□□□□ -0.46
YSR3YKR053C ECM21P38167 1117 aaKnown RBP12.15□□□□□ -0.46
YSR3YKR053C NOP2P40991 618 aaKnown RBP12.15□□□□□ -0.46
YSR3YKR053C ALO1P54783 526 aaKnown RBP12.15□□□□□ -0.46
YSR3YKR053C ADP1P25371 1049 aa12.14□□□□□ -0.47
YSR3YKR053C GRX7P38068 203 aa12.14□□□□□ -0.47
YSR3YKR053C KEL1P38853 1164 aaKnown RBP12.14□□□□□ -0.47
YSR3YKR053C EPS1P40557 701 aa12.14□□□□□ -0.47
YSR3YKR053C MSH4P40965 878 aaPredicted RBP12.14□□□□□ -0.47
YSR3YKR053C PIP2P52960 996 aa12.14□□□□□ -0.47
YSR3YKR053C NSG2P53898 299 aa12.14□□□□□ -0.47
YSR3YKR053C DUR1,2P32528 1835 aaKnown RBP12.14□□□□□ -0.47
YSR3YKR053C PMA1P05030 918 aaKnown RBP12.13□□□□□ -0.47
YSR3YKR053C APE3P37302 537 aaKnown RBP12.13□□□□□ -0.47
YSR3YKR053C TPS3P38426 1054 aaKnown RBP12.13□□□□□ -0.47
YSR3YKR053C RSC30P38781 883 aa12.13□□□□□ -0.47
YSR3YKR053C PCL8Q08966 492 aa12.13□□□□□ -0.47
YSR3YKR053C PFK2P16862 959 aaKnown RBP RIP-Chip data12.12□□□□□ -0.47not detected
YSR3YKR053C MOT2P34909 587 aaKnown RBP12.12□□□□□ -0.47
YSR3YKR053C RBA50Q04418 439 aa12.12□□□□□ -0.47
YSR3YKR053C GIN4Q12263 1142 aa12.12□□□□□ -0.47
YSR3YKR053C PPM2Q08282 695 aa12.11□□□□□ -0.47
YSR3YKR053C FLO1P32768 1537 aa12.11□□□□□ -0.47
YSR3YKR053C IOC3P43596 787 aa12.1□□□□□ -0.47
YSR3YKR053C CDC16P09798 840 aa12.09□□□□□ -0.47
YSR3YKR053C OSH3P38713 996 aaKnown RBP12.09□□□□□ -0.47
YSR3YKR053C KIN1P13185 1064 aa12.08□□□□□ -0.48
YSR3YKR053C SNU71P53207 620 aaKnown RBP12.08□□□□□ -0.48
YSR3YKR053C BRE1Q07457 700 aaKnown RBP12.08□□□□□ -0.48
YSR3YKR053C YBL028CP38202 106 aa12.07□□□□□ -0.48
YSR3YKR053C PBY1P38254 753 aa12.07□□□□□ -0.48
YSR3YKR053C YMR147WP40218 223 aaKnown RBP12.07□□□□□ -0.48
YSR3YKR053C IRC8P47046 822 aa12.07□□□□□ -0.48
YSR3YKR053C ENP2P48234 707 aaKnown RBP12.07□□□□□ -0.48
YSR3YKR053C RFC1P38630 861 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms