RNA–Protein interactions for RNA: YJR097W

JJJ3, Transcript of Protein of unknown function, yeast

Gene JJJ3, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
JJJ3	YJR097W	YTA7	P40340	1379 aa		8.1	□□□□□ -1.11
JJJ3	YJR097W	BRN1	P38170	754 aa		8.1	□□□□□ -1.11
JJJ3	YJR097W	ALD4	P46367	519 aa	Known RBP	8.1	□□□□□ -1.11
JJJ3	YJR097W	PUF6	Q04373	656 aa	Known RBP	8.1	□□□□□ -1.11
JJJ3	YJR097W	CAB1	Q04430	367 aa		8.1	□□□□□ -1.11
JJJ3	YJR097W	UTP4	Q06679	776 aa	Known RBP	8.09	□□□□□ -1.11
JJJ3	YJR097W	KAP122	P32767	1081 aa		8.08	□□□□□ -1.12
JJJ3	YJR097W	QDR2	P40474	542 aa		8.08	□□□□□ -1.12
JJJ3	YJR097W	TOP1	P04786	769 aa		8.06	□□□□□ -1.12
JJJ3	YJR097W	MDJ1	P35191	511 aa		8.06	□□□□□ -1.12
JJJ3	YJR097W	YBR197C	P38306	217 aa		8.06	□□□□□ -1.12
JJJ3	YJR097W	ISC10	P32645	267 aa		8.05	□□□□□ -1.12
JJJ3	YJR097W	CUS1	Q02554	436 aa	Predicted RBP	8.05	□□□□□ -1.12
JJJ3	YJR097W	THI72	Q08579	599 aa		8.05	□□□□□ -1.12
JJJ3	YJR097W	AI1	P03875	834 aa		8.04	□□□□□ -1.12
JJJ3	YJR097W	SRS2	P12954	1174 aa		8.04	□□□□□ -1.12
JJJ3	YJR097W	MRPL33	P20084	86 aa		8.04	□□□□□ -1.12
JJJ3	YJR097W	CWC15	Q03772	175 aa	Known RBP	8.04	□□□□□ -1.12
JJJ3	YJR097W	RPP1A	P05318	106 aa	Predicted RBP	8.03	□□□□□ -1.12
JJJ3	YJR097W	VMA3	P25515	160 aa		8.03	□□□□□ -1.12
JJJ3	YJR097W	NSG2	P53898	299 aa		8.03	□□□□□ -1.12
JJJ3	YJR097W	TY1A-DR2	Q03964	440 aa	Known RBP	8.03	□□□□□ -1.12
JJJ3	YJR097W	TPS3	P38426	1054 aa	Known RBP	8.02	□□□□□ -1.13
JJJ3	YJR097W	PNP1	Q05788	311 aa		8.02	□□□□□ -1.13
JJJ3	YJR097W	GPM1	P00950	247 aa	Known RBP	8.01	□□□□□ -1.13
JJJ3	YJR097W	MSC7	P38694	644 aa		8.01	□□□□□ -1.13
JJJ3	YJR097W	SPC42	P36094	363 aa		8	□□□□□ -1.13
JJJ3	YJR097W	NCL1	P38205	684 aa	Known RBP	8	□□□□□ -1.13
JJJ3	YJR097W	OCA5	P38738	679 aa		8	□□□□□ -1.13
JJJ3	YJR097W	IPL1	P38991	367 aa		8	□□□□□ -1.13
JJJ3	YJR097W	SBE2	P42223	864 aa	Known RBP	8	□□□□□ -1.13
JJJ3	YJR097W	RPC31	P17890	251 aa		7.99	□□□□□ -1.13
JJJ3	YJR097W	SKP1	P52286	194 aa		7.99	□□□□□ -1.13
JJJ3	YJR097W	YNR040W	P53736	256 aa		7.99	□□□□□ -1.13
JJJ3	YJR097W	LDH1	P38139	375 aa		7.98	□□□□□ -1.13
JJJ3	YJR097W	APM2	P38700	605 aa		7.98	□□□□□ -1.13
JJJ3	YJR097W	DYS1	P38791	387 aa		7.98	□□□□□ -1.13
JJJ3	YJR097W	ICP55	P40051	511 aa		7.98	□□□□□ -1.13
JJJ3	YJR097W	YNR014W	P53719	212 aa		7.98	□□□□□ -1.13
JJJ3	YJR097W	PDC5	P16467	563 aa	Known RBP	7.97	□□□□□ -1.13
JJJ3	YJR097W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.97	□□□□□ -1.13	not detected
JJJ3	YJR097W	ASF1	P32447	279 aa		7.96	□□□□□ -1.14
JJJ3	YJR097W	YFL066C	P43538	392 aa		7.96	□□□□□ -1.14
JJJ3	YJR097W	HEH2	Q03281	663 aa		7.96	□□□□□ -1.14
JJJ3	YJR097W	KNS1	P32350	737 aa	Predicted RBP	7.95	□□□□□ -1.14
JJJ3	YJR097W	BSD2	P38356	321 aa		7.95	□□□□□ -1.14
JJJ3	YJR097W	STM1	P39015	273 aa	Known RBP	7.95	□□□□□ -1.14
JJJ3	YJR097W	PUS1	Q12211	544 aa	Known RBP	7.95	□□□□□ -1.14
JJJ3	YJR097W	PHM7	Q12252	991 aa		7.95	□□□□□ -1.14
JJJ3	YJR097W	FAR11	P53917	953 aa		7.94	□□□□□ -1.14
JJJ3	YJR097W	DOS2	P54858	310 aa		7.94	□□□□□ -1.14
JJJ3	YJR097W	YOR296W	Q08748	1289 aa		7.94	□□□□□ -1.14
JJJ3	YJR097W	PRK1	P40494	810 aa		7.93	□□□□□ -1.14
JJJ3	YJR097W	TDA6	Q06466	467 aa		7.93	□□□□□ -1.14
JJJ3	YJR097W	FUR4	P05316	633 aa	Known RBP	7.92	□□□□□ -1.14
JJJ3	YJR097W	SEC20	P28791	383 aa		7.92	□□□□□ -1.14
JJJ3	YJR097W	GIP1	P38229	639 aa		7.92	□□□□□ -1.14
JJJ3	YJR097W	BOI2	P39969	1040 aa		7.92	□□□□□ -1.14
JJJ3	YJR097W	SUT1	P53032	299 aa	Known RBP	7.92	□□□□□ -1.14
JJJ3	YJR097W	ITC1	P53125	1264 aa		7.92	□□□□□ -1.14
JJJ3	YJR097W	URN1	Q06525	465 aa	Known RBP	7.92	□□□□□ -1.14
JJJ3	YJR097W	YBL113C	Q7M4S9	792 aa		7.92	□□□□□ -1.14
JJJ3	YJR097W	BOI1	P38041	980 aa	Known RBP	7.91	□□□□□ -1.14
JJJ3	YJR097W	BOL3	P39724	118 aa		7.9	□□□□□ -1.14
JJJ3	YJR097W	MTC5	Q03897	1148 aa		7.9	□□□□□ -1.14
JJJ3	YJR097W	MSN1	P22148	382 aa		7.89	□□□□□ -1.15
JJJ3	YJR097W	MET1	P36150	593 aa		7.89	□□□□□ -1.15
JJJ3	YJR097W	ISW1	P38144	1129 aa		7.89	□□□□□ -1.15
JJJ3	YJR097W	NNF1	P47149	201 aa		7.89	□□□□□ -1.15
JJJ3	YJR097W	FPR4	Q06205	392 aa	Predicted RBP	7.89	□□□□□ -1.15
JJJ3	YJR097W	RPB10	P22139	70 aa		7.88	□□□□□ -1.15
JJJ3	YJR097W	FIR1	P40020	876 aa		7.88	□□□□□ -1.15
JJJ3	YJR097W	HXT8	P40886	569 aa		7.88	□□□□□ -1.15
JJJ3	YJR097W	KAR5	Q04746	504 aa		7.88	□□□□□ -1.15
JJJ3	YJR097W	IDI1	P15496	288 aa		7.87	□□□□□ -1.15
JJJ3	YJR097W	ALG14	P38242	237 aa		7.87	□□□□□ -1.15
JJJ3	YJR097W	ERP5	P38819	212 aa		7.87	□□□□□ -1.15
JJJ3	YJR097W	YAF9	P53930	226 aa		7.87	□□□□□ -1.15
JJJ3	YJR097W	YPR053C	Q6Q5F3	151 aa		7.87	□□□□□ -1.15
JJJ3	YJR097W	ATG36	P46983	293 aa		7.86	□□□□□ -1.15
JJJ3	YJR097W	YMR187C	Q03236	431 aa		7.86	□□□□□ -1.15
JJJ3	YJR097W	MSC6	Q08818	692 aa	Known RBP	7.86	□□□□□ -1.15
JJJ3	YJR097W	LSO1	Q3E827	93 aa		7.86	□□□□□ -1.15
JJJ3	YJR097W	MRP10	O75012	95 aa		7.85	□□□□□ -1.15
JJJ3	YJR097W	PGM2	P37012	569 aa	Known RBP	7.85	□□□□□ -1.15
JJJ3	YJR097W	NUG1	P40010	520 aa	Known RBP	7.85	□□□□□ -1.15
JJJ3	YJR097W	POL32	P47110	350 aa		7.85	□□□□□ -1.15
JJJ3	YJR097W	RTS3	P53289	263 aa		7.85	□□□□□ -1.15
JJJ3	YJR097W	RRP15	Q06511	250 aa	Predicted RBP	7.85	□□□□□ -1.15
JJJ3	YJR097W	ATE1	P16639	503 aa		7.84	□□□□□ -1.15
JJJ3	YJR097W	KTR2	P33550	425 aa		7.84	□□□□□ -1.15
JJJ3	YJR097W	NMD2	P38798	1089 aa	Known RBP	7.84	□□□□□ -1.15
JJJ3	YJR097W	YJR008W	P47085	338 aa		7.84	□□□□□ -1.15
JJJ3	YJR097W	GLO3	P38682	493 aa	Known RBP	7.83	□□□□□ -1.16
JJJ3	YJR097W	LSB3	P43603	459 aa	Known RBP	7.83	□□□□□ -1.16
JJJ3	YJR097W	YJL181W	P46987	611 aa		7.83	□□□□□ -1.16
JJJ3	YJR097W	APC11	Q12157	165 aa		7.83	□□□□□ -1.16
JJJ3	YJR097W	NAR1	P23503	491 aa	Known RBP	7.82	□□□□□ -1.16
JJJ3	YJR097W	MCX1	P38323	520 aa	Predicted RBP	7.82	□□□□□ -1.16
JJJ3	YJR097W	YER156C	P40093	338 aa	Known RBP	7.82	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms