RNA–Protein interactions for RNA: YIL042C

PKP1, Transcript of Mitochondrial protein kinase, yeast

Gene PKP1, Length 1,185 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKP1	YIL042C	YNG2	P38806	282 aa	Known RBP	19.17	■□□□□ 0.66
PKP1	YIL042C	PEA2	P40091	420 aa		19.17	■□□□□ 0.66
PKP1	YIL042C	WRS1	Q12109	432 aa	Known RBP	19.17	■□□□□ 0.66
PKP1	YIL042C	GYP5	Q12344	894 aa		19.16	■□□□□ 0.66
PKP1	YIL042C	SEC18	P18759	758 aa	Known RBP	19.15	■□□□□ 0.66
PKP1	YIL042C	ILV3	P39522	585 aa	Known RBP	19.15	■□□□□ 0.66
PKP1	YIL042C	UTP7	P40055	554 aa	Known RBP	19.14	■□□□□ 0.65
PKP1	YIL042C	HGH1	P48362	394 aa	Known RBP	19.14	■□□□□ 0.65
PKP1	YIL042C	SLA1	P32790	1244 aa		19.13	■□□□□ 0.65
PKP1	YIL042C	GLO3	P38682	493 aa	Known RBP	19.13	■□□□□ 0.65
PKP1	YIL042C	ETP1	P38748	585 aa	Known RBP	19.13	■□□□□ 0.65
PKP1	YIL042C	SPO1	P53541	631 aa		19.13	■□□□□ 0.65
PKP1	YIL042C	PSF3	Q12146	194 aa		19.13	■□□□□ 0.65
PKP1	YIL042C	RPS7A	P26786	190 aa	Known RBP	19.12	■□□□□ 0.65
PKP1	YIL042C	SSF1	P38789	453 aa	Predicted RBP	19.11	■□□□□ 0.65
PKP1	YIL042C	JJJ2	P46997	583 aa		19.11	■□□□□ 0.65
PKP1	YIL042C	TYW1	Q08960	810 aa	Known RBP	19.11	■□□□□ 0.65
PKP1	YIL042C	AI2	P03876	854 aa		19.1	■□□□□ 0.65
PKP1	YIL042C	MTC3	P53077	123 aa		19.1	■□□□□ 0.65
PKP1	YIL042C	YJL171C	P46992	396 aa		19.09	■□□□□ 0.65
PKP1	YIL042C	CWC15	Q03772	175 aa	Known RBP	19.09	■□□□□ 0.65
PKP1	YIL042C	ACK1	Q07622	623 aa	Predicted RBP	19.09	■□□□□ 0.65
PKP1	YIL042C	HAL5	P38970	855 aa	Known RBP	19.08	■□□□□ 0.64
PKP1	YIL042C	YFH7	P43591	353 aa		19.08	■□□□□ 0.64
PKP1	YIL042C	RPT3	P33298	428 aa	Known RBP	19.07	■□□□□ 0.64
PKP1	YIL042C	FUN12	P39730	1002 aa	Known RBP	19.06	■□□□□ 0.64
PKP1	YIL042C	CBP1	P07252	654 aa		19.05	■□□□□ 0.64
PKP1	YIL042C	SEN54	Q02825	467 aa	Predicted RBP	19.05	■□□□□ 0.64
PKP1	YIL042C	POL32	P47110	350 aa		19.04	■□□□□ 0.64
PKP1	YIL042C	YNL193W	P53870	558 aa		19.04	■□□□□ 0.64
PKP1	YIL042C	RPN7	Q06103	429 aa	Known RBP	19.04	■□□□□ 0.64
PKP1	YIL042C	YIR042C	P40586	236 aa		19.01	■□□□□ 0.63
PKP1	YIL042C	DUS1	P53759	423 aa	Known RBP	19.01	■□□□□ 0.63
PKP1	YIL042C	PUF6	Q04373	656 aa	Known RBP	19.01	■□□□□ 0.63
PKP1	YIL042C	SNF3	P10870	884 aa		19	■□□□□ 0.63
PKP1	YIL042C	KTR3	P38130	404 aa	Predicted RBP	18.99	■□□□□ 0.63
PKP1	YIL042C	INM2	Q05533	292 aa		18.99	■□□□□ 0.63
PKP1	YIL042C	GSC2	P40989	1895 aa		18.99	■□□□□ 0.63
PKP1	YIL042C	PIF1	P07271	859 aa		18.98	■□□□□ 0.63
PKP1	YIL042C	PNT1	P38969	423 aa		18.98	■□□□□ 0.63
PKP1	YIL042C	PUS6	P53294	404 aa		18.98	■□□□□ 0.63
PKP1	YIL042C	RRI2	Q12348	645 aa		18.97	■□□□□ 0.63
PKP1	YIL042C	PTK1	P36002	662 aa	Predicted RBP	18.96	■□□□□ 0.63
PKP1	YIL042C	CSR2	Q12734	1121 aa		18.95	■□□□□ 0.62
PKP1	YIL042C	HVG1	P0CE11	249 aa		18.94	■□□□□ 0.62
PKP1	YIL042C	NCB2	Q92317	146 aa		18.94	■□□□□ 0.62
PKP1	YIL042C	NIT1	P40447	199 aa		18.93	■□□□□ 0.62
PKP1	YIL042C	APL6	P46682	809 aa		18.93	■□□□□ 0.62
PKP1	YIL042C	YGL242C	P53066	181 aa		18.93	■□□□□ 0.62
PKP1	YIL042C	FLO1	P32768	1537 aa		18.92	■□□□□ 0.62
PKP1	YIL042C	RRT6	P53117	311 aa	Predicted RBP	18.92	■□□□□ 0.62
PKP1	YIL042C	NSG2	P53898	299 aa		18.9	■□□□□ 0.62
PKP1	YIL042C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	18.89	■□□□□ 0.61	not detected
PKP1	YIL042C	BSD2	P38356	321 aa		18.88	■□□□□ 0.61
PKP1	YIL042C	CYB2	P00175	591 aa		18.87	■□□□□ 0.61
PKP1	YIL042C	TFA1	P36100	482 aa		18.87	■□□□□ 0.61
PKP1	YIL042C	ALO1	P54783	526 aa	Known RBP	18.87	■□□□□ 0.61
PKP1	YIL042C	AAD16	Q02895	342 aa		18.87	■□□□□ 0.61
PKP1	YIL042C	NOT3	P06102	836 aa	Known RBP	18.86	■□□□□ 0.61
PKP1	YIL042C	GRX7	P38068	203 aa		18.86	■□□□□ 0.61
PKP1	YIL042C	NMD2	P38798	1089 aa	Known RBP	18.86	■□□□□ 0.61
PKP1	YIL042C	KEL1	P38853	1164 aa	Known RBP	18.86	■□□□□ 0.61
PKP1	YIL042C	MDL2	P33311	773 aa		18.85	■□□□□ 0.61
PKP1	YIL042C	GAL2	P13181	574 aa		18.84	■□□□□ 0.61
PKP1	YIL042C	MLC1	P53141	149 aa		18.84	■□□□□ 0.61
PKP1	YIL042C	RAD53	P22216	821 aa		18.83	■□□□□ 0.6
PKP1	YIL042C	EPS1	P40557	701 aa		18.83	■□□□□ 0.6
PKP1	YIL042C	TIF6	Q12522	245 aa	Known RBP	18.83	■□□□□ 0.6
PKP1	YIL042C	BOI1	P38041	980 aa	Known RBP	18.82	■□□□□ 0.6
PKP1	YIL042C	ECM21	P38167	1117 aa	Known RBP	18.82	■□□□□ 0.6
PKP1	YIL042C	CST9	Q06032	482 aa		18.82	■□□□□ 0.6
PKP1	YIL042C	BDP1	P46678	594 aa		18.8	■□□□□ 0.6
PKP1	YIL042C	SRF1	Q12516	437 aa		18.8	■□□□□ 0.6
PKP1	YIL042C	PDR18	P53756	1333 aa		18.79	■□□□□ 0.6
PKP1	YIL042C	ADP1	P25371	1049 aa		18.78	■□□□□ 0.6
PKP1	YIL042C	MOT2	P34909	587 aa	Known RBP	18.78	■□□□□ 0.6
PKP1	YIL042C	NOP2	P40991	618 aa	Known RBP	18.78	■□□□□ 0.6
PKP1	YIL042C	PPM2	Q08282	695 aa		18.78	■□□□□ 0.6
PKP1	YIL042C	PCL8	Q08966	492 aa		18.78	■□□□□ 0.6
PKP1	YIL042C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	18.77	■□□□□ 0.6	not detected
PKP1	YIL042C	NPL4	P33755	580 aa		18.77	■□□□□ 0.6
PKP1	YIL042C	PMA1	P05030	918 aa	Known RBP	18.75	■□□□□ 0.59
PKP1	YIL042C	CDC16	P09798	840 aa		18.75	■□□□□ 0.59
PKP1	YIL042C	GEF1	P37020	779 aa		18.75	■□□□□ 0.59
PKP1	YIL042C	PIP2	P52960	996 aa		18.75	■□□□□ 0.59
PKP1	YIL042C	PIB2	P53191	635 aa		18.75	■□□□□ 0.59
PKP1	YIL042C	APE3	P37302	537 aa	Known RBP	18.74	■□□□□ 0.59
PKP1	YIL042C	TPS3	P38426	1054 aa	Known RBP	18.74	■□□□□ 0.59
PKP1	YIL042C	KAR5	Q04746	504 aa		18.73	■□□□□ 0.59
PKP1	YIL042C	MSH4	P40965	878 aa	Predicted RBP	18.72	■□□□□ 0.59
PKP1	YIL042C	RBA50	Q04418	439 aa		18.72	■□□□□ 0.59
PKP1	YIL042C	GIN4	Q12263	1142 aa		18.72	■□□□□ 0.59
PKP1	YIL042C	KIN1	P13185	1064 aa		18.71	■□□□□ 0.59
PKP1	YIL042C	YMR147W	P40218	223 aa	Known RBP	18.71	■□□□□ 0.59
PKP1	YIL042C	MRPS35	P53292	345 aa		18.71	■□□□□ 0.59
PKP1	YIL042C	YBL028C	P38202	106 aa		18.69	■□□□□ 0.58
PKP1	YIL042C	IOC3	P43596	787 aa		18.69	■□□□□ 0.58
PKP1	YIL042C	PEX29	Q03370	554 aa		18.69	■□□□□ 0.58
PKP1	YIL042C	RSC30	P38781	883 aa		18.68	■□□□□ 0.58
PKP1	YIL042C	TUB2	P02557	457 aa	Known RBP	18.67	■□□□□ 0.58

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms