RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W KTR7P40504 517 aa5.62□□□□□ -1.51
TFB3YDR460W UTP13Q05946 817 aaKnown RBP5.62□□□□□ -1.51
TFB3YDR460W NOB1Q08444 459 aaKnown RBP5.62□□□□□ -1.51
TFB3YDR460W PRS1P32895 427 aaKnown RBP5.6□□□□□ -1.51
TFB3YDR460W GEF1P37020 779 aa5.6□□□□□ -1.51
TFB3YDR460W RGA1P39083 1007 aa5.6□□□□□ -1.51
TFB3YDR460W TY1B-NL2Q99337 1749 aaKnown RBP5.6□□□□□ -1.51
TFB3YDR460W TRK1P12685 1235 aa5.59□□□□□ -1.51
TFB3YDR460W PAF1P38351 445 aa5.59□□□□□ -1.51
TFB3YDR460W NMD2P38798 1089 aaKnown RBP5.59□□□□□ -1.51
TFB3YDR460W EMW1P42842 904 aaKnown RBP5.59□□□□□ -1.51
TFB3YDR460W APP1P53933 587 aa5.59□□□□□ -1.51
TFB3YDR460W HED1Q03937 162 aa5.59□□□□□ -1.51
TFB3YDR460W YML083CQ04526 418 aa5.59□□□□□ -1.51
TFB3YDR460W SNF7P39929 240 aaKnown RBP5.58□□□□□ -1.52
TFB3YDR460W KRI1P42846 591 aaKnown RBP5.58□□□□□ -1.52
TFB3YDR460W ISR1Q06098 443 aaKnown RBP5.58□□□□□ -1.52
TFB3YDR460W FPR4Q06205 392 aaPredicted RBP5.58□□□□□ -1.52
TFB3YDR460W ATG20Q07528 640 aa5.58□□□□□ -1.52
TFB3YDR460W SPT2P06843 333 aaPredicted RBP5.57□□□□□ -1.52
TFB3YDR460W GAL2P13181 574 aa5.57□□□□□ -1.52
TFB3YDR460W HAL5P38970 855 aaKnown RBP5.57□□□□□ -1.52
TFB3YDR460W ECM23Q02710 187 aa5.57□□□□□ -1.52
TFB3YDR460W NOP58Q12499 511 aaKnown RBP5.57□□□□□ -1.52
TFB3YDR460W MRT4P33201 236 aaKnown RBP5.56□□□□□ -1.52
TFB3YDR460W RPL34AP87262 121 aaPredicted RBP5.56□□□□□ -1.52
TFB3YDR460W SPT7P35177 1332 aa5.55□□□□□ -1.52
TFB3YDR460W PHO87P25360 923 aa5.55□□□□□ -1.52
TFB3YDR460W CLA4P48562 842 aa5.55□□□□□ -1.52
TFB3YDR460W NUP188P52593 1655 aaKnown RBP5.55□□□□□ -1.52
TFB3YDR460W HAP1P0CE41 1502 aa5.54□□□□□ -1.52
TFB3YDR460W HAP4P14064 554 aa5.54□□□□□ -1.52
TFB3YDR460W MKS1P34072 584 aa5.54□□□□□ -1.52
TFB3YDR460W CHZ1P40019 153 aaPredicted RBP5.54□□□□□ -1.52
TFB3YDR460W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
TFB3YDR460W IML1P47170 1584 aa5.54□□□□□ -1.52
TFB3YDR460W YBT1P32386 1661 aa5.53□□□□□ -1.52
TFB3YDR460W MIP1P15801 1254 aa5.53□□□□□ -1.52
TFB3YDR460W SPC110P32380 944 aa5.53□□□□□ -1.52
TFB3YDR460W FBP26P32604 452 aa5.53□□□□□ -1.52
TFB3YDR460W YBL086CP38177 466 aa5.53□□□□□ -1.52
TFB3YDR460W UBX7P38349 436 aa5.53□□□□□ -1.52
TFB3YDR460W SMC3P47037 1230 aa5.53□□□□□ -1.52
TFB3YDR460W ACS2P52910 683 aaKnown RBP5.53□□□□□ -1.52
TFB3YDR460W ISU1Q03020 165 aa5.53□□□□□ -1.52
TFB3YDR460W HDA3Q06623 655 aa5.53□□□□□ -1.52
TFB3YDR460W TSC13Q99190 310 aa5.53□□□□□ -1.52
TFB3YDR460W CAT8P39113 1433 aa5.52□□□□□ -1.53
TFB3YDR460W PDI1P17967 522 aaKnown RBP5.52□□□□□ -1.53
TFB3YDR460W YIR014WP40570 242 aa5.52□□□□□ -1.53
TFB3YDR460W YFL034WP43564 1073 aa5.52□□□□□ -1.53
TFB3YDR460W MET32Q12041 191 aa5.52□□□□□ -1.53
TFB3YDR460W CDC4P07834 779 aa5.51□□□□□ -1.53
TFB3YDR460W AIM9P40053 627 aaKnown RBP5.51□□□□□ -1.53
TFB3YDR460W PIL1P53252 339 aaKnown RBP5.51□□□□□ -1.53
TFB3YDR460W CWC22P53333 577 aaKnown RBP5.51□□□□□ -1.53
TFB3YDR460W GAS4Q08271 471 aa5.51□□□□□ -1.53
TFB3YDR460W STE6P12866 1290 aa5.5□□□□□ -1.53
TFB3YDR460W RPC31P17890 251 aa5.5□□□□□ -1.53
TFB3YDR460W NAP1P25293 417 aaKnown RBP5.5□□□□□ -1.53
TFB3YDR460W UTR2P32623 467 aa5.5□□□□□ -1.53
TFB3YDR460W IPL1P38991 367 aa5.5□□□□□ -1.53
TFB3YDR460W AIR1P40507 360 aaKnown RBP5.5□□□□□ -1.53
TFB3YDR460W ROM1P53046 1155 aa5.5□□□□□ -1.53
TFB3YDR460W DFG5Q05031 458 aa5.5□□□□□ -1.53
TFB3YDR460W CDC3P32457 520 aaKnown RBP5.49□□□□□ -1.53
TFB3YDR460W CBF5P33322 483 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
TFB3YDR460W NTH2P35172 780 aa5.49□□□□□ -1.53
TFB3YDR460W OPY1P38271 328 aa5.49□□□□□ -1.53
TFB3YDR460W MSH4P40965 878 aaPredicted RBP5.49□□□□□ -1.53
TFB3YDR460W SRB8P25648 1427 aa5.48□□□□□ -1.53
TFB3YDR460W VMR1P38735 1592 aa5.48□□□□□ -1.53
TFB3YDR460W RPP2BP02400 110 aaKnown RBP5.48□□□□□ -1.53
TFB3YDR460W DAT1P13483 248 aaKnown RBP5.48□□□□□ -1.53
TFB3YDR460W SLX8P40072 274 aa5.48□□□□□ -1.53
TFB3YDR460W TAN1P53072 289 aaPredicted RBP5.48□□□□□ -1.53
TFB3YDR460W ENV11P53246 860 aa5.48□□□□□ -1.53
TFB3YDR460W PUF6Q04373 656 aaKnown RBP5.48□□□□□ -1.53
TFB3YDR460W YMR074CQ04773 145 aa5.48□□□□□ -1.53
TFB3YDR460W BDS1Q08347 646 aa5.48□□□□□ -1.53
TFB3YDR460W PET111P08468 800 aa5.47□□□□□ -1.53
TFB3YDR460W AFT1P22149 690 aa5.47□□□□□ -1.53
TFB3YDR460W ROX1P25042 368 aa5.47□□□□□ -1.53
TFB3YDR460W TBS1P38114 1094 aa5.47□□□□□ -1.53
TFB3YDR460W HST3P53687 447 aa5.47□□□□□ -1.53
TFB3YDR460W WTM2Q12206 467 aa5.47□□□□□ -1.53
TFB3YDR460W YLR419WQ06698 1435 aaKnown RBP5.47□□□□□ -1.53
TFB3YDR460W NOT3P06102 836 aaKnown RBP5.46□□□□□ -1.54
TFB3YDR460W SWI5P08153 709 aa5.46□□□□□ -1.54
TFB3YDR460W RPS6AP0CX37 236 aaKnown RBP5.46□□□□□ -1.54
TFB3YDR460W RPS6BP0CX38 236 aaPredicted RBP5.46□□□□□ -1.54
TFB3YDR460W VAN1P23642 535 aa5.46□□□□□ -1.54
TFB3YDR460W UGA3P26370 528 aa5.46□□□□□ -1.54
TFB3YDR460W SCT1P32784 759 aa5.46□□□□□ -1.54
TFB3YDR460W RPS0AP32905 252 aaKnown RBP5.46□□□□□ -1.54
TFB3YDR460W ASH1P34233 588 aa5.46□□□□□ -1.54
TFB3YDR460W CWC15Q03772 175 aaKnown RBP5.46□□□□□ -1.54
TFB3YDR460W TYS1P36421 394 aaKnown RBP5.45□□□□□ -1.54
TFB3YDR460W TCD1P38756 429 aa5.45□□□□□ -1.54
TFB3YDR460W MSB3P48566 633 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms