RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	COG4	Q06096	861 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	ESC2	Q06340	456 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	OPI10	Q08202	246 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	FLC1	Q08967	793 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	TOA1	P32773	286 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	PET112	P33893	541 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	YFR016C	P43597	1233 aa	Known RBP	5.01	□□□□□ -1.61
SIP1	YDR422C	STR2	P47164	639 aa		5.01	□□□□□ -1.61
SIP1	YDR422C	GNP1	P48813	663 aa		5	□□□□□ -1.61
SIP1	YDR422C	NTG2	Q08214	380 aa		5	□□□□□ -1.61
SIP1	YDR422C	CIT1	P00890	479 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	MST1	P07236	462 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	MPH2	P0CD99	609 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	CLN2	P20438	545 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	SRM1	P21827	482 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	PIC2	P40035	300 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	TMA64	Q04600	565 aa	Known RBP	4.99	□□□□□ -1.61
SIP1	YDR422C	CCP1	P00431	361 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	DAL5	P15365	543 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	TEC1	P18412	486 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	SNF7	P39929	240 aa	Known RBP	4.99	□□□□□ -1.61
SIP1	YDR422C	MSH4	P40965	878 aa	Predicted RBP	4.99	□□□□□ -1.61
SIP1	YDR422C	RTA1	P53047	317 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	CDC55	Q00362	526 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	STE20	Q03497	939 aa	Known RBP	4.99	□□□□□ -1.61
SIP1	YDR422C	HDA3	Q06623	655 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	ATG13	Q06628	738 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	TMA17	Q12513	150 aa		4.99	□□□□□ -1.61
SIP1	YDR422C	CAN1	P04817	590 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	MKK2	P32491	506 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	ISC10	P32645	267 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	GRX7	P38068	203 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	HXT5	P38695	592 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	AIM9	P40053	627 aa	Known RBP	4.98	□□□□□ -1.61
SIP1	YDR422C	YGR021W	P53212	290 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	FOX2	Q02207	900 aa	Known RBP	4.98	□□□□□ -1.61
SIP1	YDR422C	COB	P00163	385 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	MRC1	P25588	1096 aa		4.98	□□□□□ -1.61
SIP1	YDR422C	VPS35	P34110	944 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	BET3	P36149	193 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	ADR1	P07248	1323 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	VAN1	P23642	535 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	PEP7	P32609	515 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	YEL023C	P39992	682 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	NOP2	P40991	618 aa	Known RBP	4.97	□□□□□ -1.61
SIP1	YDR422C	GPP1	P41277	250 aa	Known RBP	4.97	□□□□□ -1.61
SIP1	YDR422C	MID1	P41821	548 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	COG6	P53959	839 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	YNL034W	P53963	612 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	YNL018C	P53976	612 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	RSC4	Q02206	625 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	YPR097W	Q06839	1073 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	MPC54	Q08550	464 aa		4.97	□□□□□ -1.61
SIP1	YDR422C	DPS1	P04802	557 aa	Known RBP	4.96	□□□□□ -1.61
SIP1	YDR422C	HEM13	P11353	328 aa	Known RBP	4.96	□□□□□ -1.61
SIP1	YDR422C	DUR3	P33413	735 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	SEA4	P38164	1038 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	AMN1	P38285	549 aa	Predicted RBP	4.96	□□□□□ -1.61
SIP1	YDR422C	SPR3	P41901	512 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	TIM54	P47045	478 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	CTR9	P89105	1077 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	SND1	Q04007	877 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	SLX4	Q12098	748 aa		4.96	□□□□□ -1.61
SIP1	YDR422C	SNU66	Q12420	587 aa	Predicted RBP	4.96	□□□□□ -1.61
SIP1	YDR422C	PDC1	P06169	563 aa	Known RBP	4.96	□□□□□ -1.62
SIP1	YDR422C	PRE9	P23638	258 aa	Known RBP	4.96	□□□□□ -1.62
SIP1	YDR422C	NTH2	P35172	780 aa		4.96	□□□□□ -1.62
SIP1	YDR422C	PAC1	P39946	494 aa	Known RBP	4.96	□□□□□ -1.62
SIP1	YDR422C	VID27	P40157	782 aa		4.96	□□□□□ -1.62
SIP1	YDR422C	RPA14	P50106	137 aa		4.96	□□□□□ -1.62
SIP1	YDR422C	YNL011C	P53980	444 aa		4.96	□□□□□ -1.62
SIP1	YDR422C	NUD1	P32336	851 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	ISM1	P48526	1002 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	UTP14	Q04500	899 aa	Known RBP	4.95	□□□□□ -1.62
SIP1	YDR422C	ISR1	Q06098	443 aa	Known RBP	4.95	□□□□□ -1.62
SIP1	YDR422C	YLR125W	Q12138	136 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	SRF1	Q12516	437 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	GCR1	P07261	785 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	MEF1	P25039	761 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	MSH2	P25847	964 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	GUT2	P32191	649 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	THI4	P32318	326 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	YBR184W	P38299	523 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	CHZ1	P40019	153 aa	Predicted RBP	4.95	□□□□□ -1.62
SIP1	YDR422C	SET4	P42948	560 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	YLR001C	Q07895	862 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	YOR131C	Q12486	218 aa		4.95	□□□□□ -1.62
SIP1	YDR422C	NPR1	P22211	790 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	VAC17	P25591	423 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	RPL8B	P29453	256 aa	Known RBP	4.94	□□□□□ -1.62
SIP1	YDR422C	BNA1	P47096	177 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	TAF8	Q03750	510 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	TDA5	Q06417	326 aa	Known RBP	4.94	□□□□□ -1.62
SIP1	YDR422C	BDS1	Q08347	646 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	TRS33	Q99394	268 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	HTA1	P04911	132 aa	Known RBP	4.94	□□□□□ -1.62
SIP1	YDR422C	HTA2	P04912	132 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	APA1	P16550	321 aa	Known RBP	4.94	□□□□□ -1.62
SIP1	YDR422C	YKL222C	P35995	705 aa		4.94	□□□□□ -1.62
SIP1	YDR422C	RKM3	P38222	552 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms