RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W NGR1P32831 672 aaKnown RBP3.4□□□□□ -1.87
PRP42YDR235W YFL034WP43564 1073 aa3.39□□□□□ -1.87
PRP42YDR235W NTH2P35172 780 aa3.38□□□□□ -1.87
PRP42YDR235W SKP1P52286 194 aa3.38□□□□□ -1.87
PRP42YDR235W MAG2Q06436 670 aaKnown RBP3.38□□□□□ -1.87
PRP42YDR235W CYC7P00045 113 aa3.37□□□□□ -1.87
PRP42YDR235W KIN1P13185 1064 aa3.37□□□□□ -1.87
PRP42YDR235W RNQ1P25367 405 aa3.37□□□□□ -1.87
PRP42YDR235W CUS1Q02554 436 aaPredicted RBP3.37□□□□□ -1.87
PRP42YDR235W SLP1Q12232 587 aa3.37□□□□□ -1.87
PRP42YDR235W TY4B-PA0A0B7P3V8 1104 aa3.36□□□□□ -1.87
PRP42YDR235W APM2P38700 605 aa3.36□□□□□ -1.87
PRP42YDR235W AKR1P39010 764 aa3.36□□□□□ -1.87
PRP42YDR235W YNR040WP53736 256 aa3.36□□□□□ -1.87
PRP42YDR235W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
PRP42YDR235W TY4A-HQ6Q5P6 413 aa3.36□□□□□ -1.87
PRP42YDR235W NAM7P30771 971 aaKnown RBP3.35□□□□□ -1.87
PRP42YDR235W GUA1P38625 525 aaKnown RBP3.35□□□□□ -1.87
PRP42YDR235W SPO74P45819 413 aa3.35□□□□□ -1.87
PRP42YDR235W TY1A-NL1Q12391 440 aaKnown RBP3.35□□□□□ -1.87
PRP42YDR235W MRP10O75012 95 aa3.34□□□□□ -1.87
PRP42YDR235W ENO2P00925 437 aaKnown RBP3.34□□□□□ -1.87
PRP42YDR235W YCR015CP25616 317 aa3.34□□□□□ -1.87
PRP42YDR235W YKL222CP35995 705 aa3.34□□□□□ -1.87
PRP42YDR235W SUP45P12385 437 aaKnown RBP3.33□□□□□ -1.88
PRP42YDR235W KAP122P32767 1081 aa3.33□□□□□ -1.88
PRP42YDR235W PDI1P17967 522 aaKnown RBP3.33□□□□□ -1.88
PRP42YDR235W TED1P40533 473 aa3.33□□□□□ -1.88
PRP42YDR235W UTP4Q06679 776 aaKnown RBP3.33□□□□□ -1.88
PRP42YDR235W CYT1P07143 309 aa3.32□□□□□ -1.88
PRP42YDR235W SEG2P34250 1132 aa3.32□□□□□ -1.88
PRP42YDR235W DSE4P53753 1117 aa3.32□□□□□ -1.88
PRP42YDR235W YNL108CP53929 270 aa3.32□□□□□ -1.88
PRP42YDR235W IDI1P15496 288 aa3.31□□□□□ -1.88
PRP42YDR235W RDS2P19541 446 aaKnown RBP3.31□□□□□ -1.88
PRP42YDR235W BIO2P32451 375 aa3.31□□□□□ -1.88
PRP42YDR235W BRL1P38770 471 aa3.31□□□□□ -1.88
PRP42YDR235W GIS1Q03833 894 aa3.31□□□□□ -1.88
PRP42YDR235W REC8Q12188 680 aa3.31□□□□□ -1.88
PRP42YDR235W GIP2P40036 548 aa3.3□□□□□ -1.88
PRP42YDR235W NIT1P40447 199 aa3.3□□□□□ -1.88
PRP42YDR235W RIM21P48565 533 aa3.3□□□□□ -1.88
PRP42YDR235W TSC13Q99190 310 aa3.3□□□□□ -1.88
PRP42YDR235W RPC31P17890 251 aa3.3□□□□□ -1.88
PRP42YDR235W MSB1P21339 1137 aaKnown RBP3.29□□□□□ -1.88
PRP42YDR235W SCD5P34758 872 aa3.29□□□□□ -1.88
PRP42YDR235W LRG1P35688 1017 aa3.29□□□□□ -1.88
PRP42YDR235W SOK2P53438 785 aaPredicted RBP3.29□□□□□ -1.88
PRP42YDR235W PKC1P24583 1151 aa3.27□□□□□ -1.89
PRP42YDR235W SEA4P38164 1038 aa3.27□□□□□ -1.89
PRP42YDR235W YER156CP40093 338 aaKnown RBP3.27□□□□□ -1.89
PRP42YDR235W SDH1Q00711 640 aa3.27□□□□□ -1.89
PRP42YDR235W ESC8Q08119 714 aa3.27□□□□□ -1.89
PRP42YDR235W POL12P38121 705 aaPredicted RBP3.26□□□□□ -1.89
PRP42YDR235W ECL1P48235 211 aa3.26□□□□□ -1.89
PRP42YDR235W ITC1P53125 1264 aa3.26□□□□□ -1.89
PRP42YDR235W HXT5P38695 592 aa3.26□□□□□ -1.89
PRP42YDR235W QDR2P40474 542 aa3.26□□□□□ -1.89
PRP42YDR235W PRP43P53131 767 aaKnown RBP3.25□□□□□ -1.89
PRP42YDR235W DFG16Q99234 619 aa3.25□□□□□ -1.89
PRP42YDR235W TAF1P46677 1066 aa3.24□□□□□ -1.89
PRP42YDR235W GAS1P22146 559 aaKnown RBP3.23□□□□□ -1.89
PRP42YDR235W GIP4P39732 760 aa3.22□□□□□ -1.89
PRP42YDR235W RSC2Q06488 889 aa3.22□□□□□ -1.89
PRP42YDR235W YJL181WP46987 611 aa3.22□□□□□ -1.89
PRP42YDR235W MRX10Q05648 414 aa3.22□□□□□ -1.89
PRP42YDR235W GCD1P09032 578 aaPredicted RBP3.21□□□□□ -1.9
PRP42YDR235W UBP1P25037 809 aa3.21□□□□□ -1.9
PRP42YDR235W PAN5P38787 379 aa3.21□□□□□ -1.9
PRP42YDR235W NCE103P53615 221 aa3.21□□□□□ -1.9
PRP42YDR235W YOR296WQ08748 1289 aa3.21□□□□□ -1.9
PRP42YDR235W ACS2P52910 683 aaKnown RBP3.2□□□□□ -1.9
PRP42YDR235W ENO1P00924 437 aaKnown RBP3.19□□□□□ -1.9
PRP42YDR235W MAE1P36013 669 aaKnown RBP3.19□□□□□ -1.9
PRP42YDR235W YHL008CP38750 627 aa3.19□□□□□ -1.9
PRP42YDR235W GIC2Q06648 383 aa3.19□□□□□ -1.9
PRP42YDR235W PPT1P53043 513 aa3.19□□□□□ -1.9
PRP42YDR235W GUP1P53154 560 aa3.19□□□□□ -1.9
PRP42YDR235W PHO87P25360 923 aa3.18□□□□□ -1.9
PRP42YDR235W GIP1P38229 639 aa3.18□□□□□ -1.9
PRP42YDR235W BSD2P38356 321 aa3.18□□□□□ -1.9
PRP42YDR235W CDA2Q06703 312 aa3.18□□□□□ -1.9
PRP42YDR235W GAS4Q08271 471 aa3.18□□□□□ -1.9
PRP42YDR235W HAP4P14064 554 aa3.17□□□□□ -1.9
PRP42YDR235W PEP12P32854 288 aa3.17□□□□□ -1.9
PRP42YDR235W DYS1P38791 387 aa3.17□□□□□ -1.9
PRP42YDR235W POL5P39985 1022 aaKnown RBP3.17□□□□□ -1.9
PRP42YDR235W LEM3P42838 414 aa3.17□□□□□ -1.9
PRP42YDR235W YJL007CP47080 104 aa3.17□□□□□ -1.9
PRP42YDR235W VMA3P25515 160 aa3.16□□□□□ -1.9
PRP42YDR235W INP51P40559 946 aaKnown RBP3.16□□□□□ -1.9
PRP42YDR235W NSI1Q12457 570 aa3.16□□□□□ -1.9
PRP42YDR235W THI80P35202 319 aa3.15□□□□□ -1.9
PRP42YDR235W YIL165CP40446 119 aa3.15□□□□□ -1.9
PRP42YDR235W KTR7P40504 517 aa3.15□□□□□ -1.9
PRP42YDR235W YNR065CP53751 1116 aa3.15□□□□□ -1.9
PRP42YDR235W HDA2Q06629 674 aa3.15□□□□□ -1.9
PRP42YDR235W ELG1Q12050 791 aa3.15□□□□□ -1.9
PRP42YDR235W HSP78P33416 811 aa3.15□□□□□ -1.91
PRP42YDR235W TSA1P34760 196 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms