RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C TAT2P38967 592 aa2.42□□□□□ -2.02
MSH6YDR097C YJR107WP47145 328 aa2.42□□□□□ -2.02
MSH6YDR097C ISM1P48526 1002 aa2.42□□□□□ -2.02
MSH6YDR097C MTO1P53070 669 aa2.42□□□□□ -2.02
MSH6YDR097C YNL035CP53962 389 aaKnown RBP2.42□□□□□ -2.02
MSH6YDR097C MPC54Q08550 464 aa2.42□□□□□ -2.02
MSH6YDR097C PDR10P51533 1564 aa2.42□□□□□ -2.02
MSH6YDR097C GCN2P15442 1659 aa2.42□□□□□ -2.02
MSH6YDR097C KIP2P28743 706 aa2.41□□□□□ -2.02
MSH6YDR097C NMA111P53920 997 aa2.41□□□□□ -2.02
MSH6YDR097C MYO4P32492 1471 aa2.41□□□□□ -2.02
MSH6YDR097C ROM1P53046 1155 aa2.41□□□□□ -2.02
MSH6YDR097C FRA1Q07825 749 aa2.41□□□□□ -2.02
MSH6YDR097C STB3Q12427 513 aa2.41□□□□□ -2.02
MSH6YDR097C TIM54P47045 478 aa2.41□□□□□ -2.02
MSH6YDR097C CWH41P53008 833 aa2.41□□□□□ -2.02
MSH6YDR097C DPL1Q05567 589 aa2.41□□□□□ -2.02
MSH6YDR097C MNL2Q12205 849 aa2.41□□□□□ -2.02
MSH6YDR097C MOD5P07884 428 aa2.4□□□□□ -2.02
MSH6YDR097C NTH2P35172 780 aa2.4□□□□□ -2.02
MSH6YDR097C JIP4Q03361 876 aa2.4□□□□□ -2.02
MSH6YDR097C FIG4P42837 879 aa2.4□□□□□ -2.03
MSH6YDR097C PUF6Q04373 656 aaKnown RBP2.4□□□□□ -2.03
MSH6YDR097C POM152P39685 1337 aa2.4□□□□□ -2.03
MSH6YDR097C ENP1P38333 483 aaKnown RBP2.4□□□□□ -2.03
MSH6YDR097C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
MSH6YDR097C MAG2Q06436 670 aaKnown RBP2.4□□□□□ -2.03
MSH6YDR097C GRX7P38068 203 aa2.39□□□□□ -2.03
MSH6YDR097C ALR1Q08269 859 aa2.39□□□□□ -2.03
MSH6YDR097C MET6P05694 767 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C HAP4P14064 554 aa2.39□□□□□ -2.03
MSH6YDR097C SEC2P17065 759 aa2.39□□□□□ -2.03
MSH6YDR097C BAS1P22035 811 aa2.39□□□□□ -2.03
MSH6YDR097C PHO87P25360 923 aa2.39□□□□□ -2.03
MSH6YDR097C UTP7P40055 554 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C GDE1Q02979 1223 aa2.39□□□□□ -2.03
MSH6YDR097C PUS5Q06244 254 aa2.39□□□□□ -2.03
MSH6YDR097C YGR161W-CQ3E744 92 aa2.39□□□□□ -2.03
MSH6YDR097C TRS33Q99394 268 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-DR4O74302 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-HP0C2I4 478 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C TY1A-AP0CX57 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-PR1P0CX58 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-ORP0CX59 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-PR2P0CX60 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-DR5P0CX65 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-ER2P0CX66 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-GR3P0CX67 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-LR1P0CX68 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-MR2P0CX69 440 aa2.39□□□□□ -2.03
MSH6YDR097C PAC1P39946 494 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C NUG1P40010 520 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C AIM9P40053 627 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C TY1A-JR2P47099 440 aa2.39□□□□□ -2.03
MSH6YDR097C STR2P47164 639 aa2.39□□□□□ -2.03
MSH6YDR097C KXD1P53158 218 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-DR1Q03856 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-ML1Q04706 440 aaKnown RBP2.39□□□□□ -2.03
MSH6YDR097C YDL129WQ07555 291 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-BRQ12217 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-NL2Q12470 440 aa2.39□□□□□ -2.03
MSH6YDR097C TY1A-GR2Q12485 440 aa2.39□□□□□ -2.03
MSH6YDR097C PRE9P23638 258 aaKnown RBP2.38□□□□□ -2.03
MSH6YDR097C MNN1P39106 762 aa2.38□□□□□ -2.03
MSH6YDR097C ATG3P40344 310 aa2.38□□□□□ -2.03
MSH6YDR097C RRD1P40454 393 aaKnown RBP2.38□□□□□ -2.03
MSH6YDR097C YAF9P53930 226 aa2.38□□□□□ -2.03
MSH6YDR097C HDA3Q06623 655 aa2.38□□□□□ -2.03
MSH6YDR097C LSO1Q3E827 93 aa2.38□□□□□ -2.03
MSH6YDR097C ACF4P47129 309 aa2.38□□□□□ -2.03
MSH6YDR097C ATG1P53104 897 aa2.38□□□□□ -2.03
MSH6YDR097C HUL5P53119 910 aa2.38□□□□□ -2.03
MSH6YDR097C YPR015CQ12531 247 aa2.38□□□□□ -2.03
MSH6YDR097C CIT2P08679 460 aa2.38□□□□□ -2.03
MSH6YDR097C SRS2P12954 1174 aa2.38□□□□□ -2.03
MSH6YDR097C SUV3P32580 737 aa2.38□□□□□ -2.03
MSH6YDR097C YEN1P40028 759 aa2.38□□□□□ -2.03
MSH6YDR097C MON1P53129 644 aa2.38□□□□□ -2.03
MSH6YDR097C TSC13Q99190 310 aa2.38□□□□□ -2.03
MSH6YDR097C MET4P32389 672 aa2.37□□□□□ -2.03
MSH6YDR097C PET112P33893 541 aa2.37□□□□□ -2.03
MSH6YDR097C ECM2P38241 364 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C TDA5Q06417 326 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C BUD21Q08492 214 aaPredicted RBP2.37□□□□□ -2.03
MSH6YDR097C CYT1P07143 309 aa2.37□□□□□ -2.03
MSH6YDR097C THI4P32318 326 aa2.37□□□□□ -2.03
MSH6YDR097C BOI1P38041 980 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C HAL5P38970 855 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C ALG12P53730 551 aa2.37□□□□□ -2.03
MSH6YDR097C YPR097WQ06839 1073 aa2.37□□□□□ -2.03
MSH6YDR097C ISU2Q12056 156 aa2.37□□□□□ -2.03
MSH6YDR097C FAL1Q12099 399 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C TOM20P35180 183 aa2.37□□□□□ -2.03
MSH6YDR097C TBS1P38114 1094 aa2.37□□□□□ -2.03
MSH6YDR097C ALA1P40825 983 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C ECM16Q04217 1267 aaKnown RBP2.37□□□□□ -2.03
MSH6YDR097C ATG20Q07528 640 aa2.37□□□□□ -2.03
MSH6YDR097C DED1P06634 604 aaKnown RBP2.36□□□□□ -2.03
MSH6YDR097C SEC61P32915 480 aa2.36□□□□□ -2.03
MSH6YDR097C IXR1P33417 597 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms