RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	SUB1	P54000	292 aa	Known RBP	4.86	□□□□□ -1.63
YAL004W	YAL004W	ASF1	P32447	279 aa		4.85	□□□□□ -1.63
YAL004W	YAL004W	SSF1	P38789	453 aa	Predicted RBP	4.85	□□□□□ -1.63
YAL004W	YAL004W	UTP7	P40055	554 aa	Known RBP	4.85	□□□□□ -1.63
YAL004W	YAL004W	ATG32	P40458	529 aa		4.85	□□□□□ -1.63
YAL004W	YAL004W	SUM1	P46676	1062 aa		4.85	□□□□□ -1.63
YAL004W	YAL004W	FAR11	P53917	953 aa		4.85	□□□□□ -1.63
YAL004W	YAL004W	DOS2	P54858	310 aa		4.85	□□□□□ -1.63
YAL004W	YAL004W	TRM732	Q03496	1420 aa		4.85	□□□□□ -1.63
YAL004W	YAL004W	IRE1	P32361	1115 aa		4.84	□□□□□ -1.63
YAL004W	YAL004W	RTS3	P53289	263 aa		4.84	□□□□□ -1.63
YAL004W	YAL004W	PSH1	Q12161	406 aa		4.84	□□□□□ -1.63
YAL004W	YAL004W	PAN1	P32521	1480 aa		4.83	□□□□□ -1.64
YAL004W	YAL004W	DAT1	P13483	248 aa	Known RBP	4.83	□□□□□ -1.64
YAL004W	YAL004W	CPS1	P27614	576 aa		4.83	□□□□□ -1.64
YAL004W	YAL004W	MET1	P36150	593 aa		4.83	□□□□□ -1.64
YAL004W	YAL004W	MRPL16	P38064	232 aa		4.83	□□□□□ -1.64
YAL004W	YAL004W	SEN54	Q02825	467 aa	Predicted RBP	4.83	□□□□□ -1.64
YAL004W	YAL004W	TY1A-DR2	Q03964	440 aa	Known RBP	4.83	□□□□□ -1.64
YAL004W	YAL004W	PDC6	P26263	563 aa	Known RBP	4.82	□□□□□ -1.64
YAL004W	YAL004W	VPS72	Q03388	795 aa		4.82	□□□□□ -1.64
YAL004W	YAL004W	GLT1	Q12680	2145 aa	Known RBP	4.82	□□□□□ -1.64
YAL004W	YAL004W	GEA1	P47102	1408 aa	Predicted RBP	4.81	□□□□□ -1.64
YAL004W	YAL004W	RPS31	P05759	152 aa	Known RBP	4.81	□□□□□ -1.64
YAL004W	YAL004W	TAT1	P38085	619 aa		4.81	□□□□□ -1.64
YAL004W	YAL004W	OCA5	P38738	679 aa		4.81	□□□□□ -1.64
YAL004W	YAL004W	SPR3	P41901	512 aa		4.81	□□□□□ -1.64
YAL004W	YAL004W	EMP47	P43555	445 aa		4.81	□□□□□ -1.64
YAL004W	YAL004W	PRY1	P47032	299 aa		4.81	□□□□□ -1.64
YAL004W	YAL004W	FPR4	Q06205	392 aa	Predicted RBP	4.81	□□□□□ -1.64
YAL004W	YAL004W	SWE1	P32944	819 aa		4.8	□□□□□ -1.64
YAL004W	YAL004W	MSC7	P38694	644 aa		4.8	□□□□□ -1.64
YAL004W	YAL004W	YJR008W	P47085	338 aa		4.8	□□□□□ -1.64
YAL004W	YAL004W	YPL034W	Q03083	165 aa		4.8	□□□□□ -1.64
YAL004W	YAL004W	MCM16	Q12262	181 aa		4.8	□□□□□ -1.64
YAL004W	YAL004W	NUP170	P38181	1502 aa		4.8	□□□□□ -1.64
YAL004W	YAL004W	TIF1	P10081	395 aa	Known RBP	4.79	□□□□□ -1.64
YAL004W	YAL004W	ISF1	P32488	338 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	MAC1	P35192	417 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	TBS1	P38114	1094 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	ATG36	P46983	293 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	INP52	P50942	1183 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	HAT1	Q12341	374 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	STB3	Q12427	513 aa		4.79	□□□□□ -1.64
YAL004W	YAL004W	TTI1	P36097	1038 aa		4.78	□□□□□ -1.64
YAL004W	YAL004W	YAF9	P53930	226 aa		4.78	□□□□□ -1.64
YAL004W	YAL004W	NOB1	Q08444	459 aa	Known RBP	4.78	□□□□□ -1.64
YAL004W	YAL004W	VTH1	P40438	1549 aa		4.77	□□□□□ -1.65
YAL004W	YAL004W	VTH2	P40890	1549 aa		4.77	□□□□□ -1.65
YAL004W	YAL004W	SSM4	P40318	1319 aa		4.77	□□□□□ -1.65
YAL004W	YAL004W	NMD2	P38798	1089 aa	Known RBP	4.77	□□□□□ -1.65
YAL004W	YAL004W	ALA1	P40825	983 aa	Known RBP	4.77	□□□□□ -1.65
YAL004W	YAL004W	ALO1	P54783	526 aa	Known RBP	4.77	□□□□□ -1.65
YAL004W	YAL004W	YPQ2	Q06328	317 aa		4.77	□□□□□ -1.65
YAL004W	YAL004W	CAT8	P39113	1433 aa		4.77	□□□□□ -1.65
YAL004W	YAL004W	CDC25	P04821	1589 aa		4.76	□□□□□ -1.65
YAL004W	YAL004W	LEU1	P07264	779 aa	Known RBP	4.76	□□□□□ -1.65
YAL004W	YAL004W	IRC24	P40580	263 aa		4.76	□□□□□ -1.65
YAL004W	YAL004W	ALD4	P46367	519 aa	Known RBP	4.76	□□□□□ -1.65
YAL004W	YAL004W	CSE4	P36012	229 aa		4.75	□□□□□ -1.65
YAL004W	YAL004W	NNF1	P47149	201 aa		4.75	□□□□□ -1.65
YAL004W	YAL004W	ALD2	P47771	506 aa		4.75	□□□□□ -1.65
YAL004W	YAL004W	HDA3	Q06623	655 aa		4.75	□□□□□ -1.65
YAL004W	YAL004W	RTG2	P32608	588 aa	Known RBP	4.74	□□□□□ -1.65
YAL004W	YAL004W	YBL036C	P38197	257 aa		4.74	□□□□□ -1.65
YAL004W	YAL004W	TPS3	P38426	1054 aa	Known RBP	4.74	□□□□□ -1.65
YAL004W	YAL004W	STM1	P39015	273 aa	Known RBP	4.74	□□□□□ -1.65
YAL004W	YAL004W	OSW7	P43611	510 aa		4.74	□□□□□ -1.65
YAL004W	YAL004W	GEA2	P39993	1459 aa	Known RBP	4.74	□□□□□ -1.65
YAL004W	YAL004W	PDR15	Q04182	1529 aa	Known RBP	4.73	□□□□□ -1.65
YAL004W	YAL004W	SPT5	P27692	1063 aa	Known RBP	4.73	□□□□□ -1.65
YAL004W	YAL004W	SEC20	P28791	383 aa		4.73	□□□□□ -1.65
YAL004W	YAL004W	IPL1	P38991	367 aa		4.73	□□□□□ -1.65
YAL004W	YAL004W	BUD9	P53226	547 aa		4.73	□□□□□ -1.65
YAL004W	YAL004W	UTP13	Q05946	817 aa	Known RBP	4.73	□□□□□ -1.65
YAL004W	YAL004W	MET5	P47169	1442 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	PGM1	P33401	570 aa	Known RBP	4.72	□□□□□ -1.65
YAL004W	YAL004W	GIN4	Q12263	1142 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	VPS15	P22219	1454 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-LR1	P0C2J3	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-F	P0CX63	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-GR2	P0CX64	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-C	P25384	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-DR2	Q03494	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY1B-DR1	Q03855	1755 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-OR1	Q12113	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-DR1	Q12472	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	TY2B-OR2	Q12501	1770 aa		4.72	□□□□□ -1.65
YAL004W	YAL004W	DNF1	P32660	1571 aa		4.71	□□□□□ -1.66
YAL004W	YAL004W	YDJ1	P25491	409 aa	Known RBP	4.71	□□□□□ -1.66
YAL004W	YAL004W	BIO2	P32451	375 aa		4.71	□□□□□ -1.66
YAL004W	YAL004W	OMA1	P36163	345 aa		4.71	□□□□□ -1.66
YAL004W	YAL004W	SOH1	P38633	127 aa		4.71	□□□□□ -1.66
YAL004W	YAL004W	YML083C	Q04526	418 aa		4.71	□□□□□ -1.66
YAL004W	YAL004W	SVF1	Q05515	481 aa		4.71	□□□□□ -1.66
YAL004W	YAL004W	NUP159	P40477	1460 aa		4.7	□□□□□ -1.66
YAL004W	YAL004W	RRP14	P36080	434 aa	Known RBP	4.7	□□□□□ -1.66
YAL004W	YAL004W	MDG1	P53885	366 aa		4.7	□□□□□ -1.66
YAL004W	YAL004W	YNL165W	P53891	406 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms