RNA–Protein interactions for RNA: ENST00000640791.1

SCN2A-218, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,169 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-218ENST00000640791 SLC4A1APQ9BWU0 796 aaKnown RBP2.47□□□□□ -2.01
SCN2A-218ENST00000640791 GLI3P10071 1580 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 TROQ12816 1431 aaPredicted RBP2.47□□□□□ -2.01
SCN2A-218ENST00000640791 PZPP20742 1482 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 CCDC18Q5T9S5 1454 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 ADGBQ8N7X0 1667 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 PHF14O94880 888 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 NAP1L2Q9ULW6 460 aaPredicted RBP2.47□□□□□ -2.01
SCN2A-218ENST00000640791 LOC105371045A0A1W2PR82 267 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 PTMAP06454 111 aaKnown RBP2.47□□□□□ -2.01
SCN2A-218ENST00000640791 KNSTRNQ9Y448 316 aa2.47□□□□□ -2.01
SCN2A-218ENST00000640791 MARF1Q9Y4F3 1742 aaKnown RBP2.47□□□□□ -2.01
SCN2A-218ENST00000640791 RP1L1Q8IWN7 2480 aaPredicted RBP2.46□□□□□ -2.01
SCN2A-218ENST00000640791 NALCNQ8IZF0 1738 aa2.46□□□□□ -2.01
SCN2A-218ENST00000640791 MED1Q15648 1581 aaPredicted RBP2.46□□□□□ -2.01
SCN2A-218ENST00000640791 CHMP7Q8WUX9 453 aaPredicted RBP2.46□□□□□ -2.01
SCN2A-218ENST00000640791 MYH9P35579 1960 aaKnown RBP2.46□□□□□ -2.02
SCN2A-218ENST00000640791 WASHC2AQ641Q2 1341 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 FANCIQ9NVI1 1328 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 WASHC2CQ9Y4E1 1318 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 RIMS1Q86UR5 1692 aaKnown RBP2.46□□□□□ -2.02
SCN2A-218ENST00000640791 HECW1Q76N89 1606 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 CCP110O43303 1012 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 CDR1P51861 262 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 SETQ01105 290 aaPredicted RBP2.46□□□□□ -2.02
SCN2A-218ENST00000640791 KIAA2012Q0VF49 1180 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 GPS2Q13227 327 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 CAMSAP1Q5T5Y3 1602 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 KIF16BQ96L93 1317 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 HMMRO75330 724 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 ACBD3Q9H3P7 528 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 MYO5BQ9ULV0 1848 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 YEATS2Q9ULM3 1422 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 LMO7Q8WWI1 1683 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 ATP6V1DQ9Y5K8 247 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 ROCK1Q13464 1354 aa2.46□□□□□ -2.02
SCN2A-218ENST00000640791 ZNF326Q5BKZ1 582 aaKnown RBP2.46□□□□□ -2.02
SCN2A-218ENST00000640791 COL1A1P02452 1464 aaPredicted RBP2.46□□□□□ -2.02
SCN2A-218ENST00000640791 LETM1O95202 739 aaPredicted RBP2.45□□□□□ -2.02
SCN2A-218ENST00000640791 MSNP26038 577 aaKnown RBP2.45□□□□□ -2.02
SCN2A-218ENST00000640791 C1orf167Q5SNV9 1468 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 CCDC144AA2RUR9 1427 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 PREX2Q70Z35 1606 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 KLHL34Q8N239 644 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 STAG3Q9UJ98 1225 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 KIF7Q2M1P5 1343 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 HMGB3O15347 200 aaKnown RBP2.45□□□□□ -2.02
SCN2A-218ENST00000640791 MYH10P35580 1976 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 HERC1Q15751 4861 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 RNF20Q5VTR2 975 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 CCDC7Q96M83 1385 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 NPM2Q86SE8 214 aaKnown RBP2.45□□□□□ -2.02
SCN2A-218ENST00000640791 TSPYL1Q9H0U9 437 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 KIF15Q9NS87 1388 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 USP54Q70EL1 1684 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 TXLNBQ8N3L3 684 aa2.45□□□□□ -2.02
SCN2A-218ENST00000640791 CGNL1Q0VF96 1302 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 MYOM2P54296 1465 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 CARMIL1Q5VZK9 1371 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 CT47B1P0C2W7 299 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 LRRFIP1Q32MZ4 808 aaKnown RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 HDGFL2Q7Z4V5 671 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 ERCC4Q92889 916 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 USH2AO75445 5202 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 ADGRB2O60241 1585 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 CENPJQ9HC77 1338 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 RICTORQ6R327 1708 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 TMEM94Q12767 1356 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 PIP4K2AP48426 406 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 BCANQ96GW7 911 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 SETBP1Q9Y6X0 1596 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 TPM2P07951 284 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 CCDC70Q6NSX1 233 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 PPARGC1BQ86YN6 1023 aaKnown RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 GPATCH3Q96I76 525 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 CARD11Q9BXL7 1154 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 CFDP1Q9UEE9 299 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 DMRT2Q9Y5R5 561 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 ZCCHC11Q5TAX3 1644 aaKnown RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 DAPK1P53355 1430 aa2.44□□□□□ -2.02
SCN2A-218ENST00000640791 RRBP1Q9P2E9 1410 aaKnown RBP2.44□□□□□ -2.02
SCN2A-218ENST00000640791 GOLGA6L4A6NEF3 574 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 HSP90AB1P08238 724 aaKnown RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 HSP90AB4PQ58FF6 505 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 SPAG17Q6Q759 2223 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 TULP4Q9NRJ4 1543 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 DHX29Q7Z478 1369 aaKnown RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 FANCAO15360 1455 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 TAF3Q5VWG9 929 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 CCDC47Q96A33 483 aaKnown RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 TUBB4AP04350 444 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 NOM1Q5C9Z4 860 aaKnown RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 CENPQQ7L2Z9 268 aaPredicted RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 GON4LQ3T8J9 2241 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 IRX6P78412 446 aaPredicted RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 FTSJ3Q8IY81 847 aaKnown RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 MYBBP1AQ9BQG0 1328 aaKnown RBP2.43□□□□□ -2.02
SCN2A-218ENST00000640791 MYH6P13533 1939 aa2.43□□□□□ -2.02
SCN2A-218ENST00000640791 MYH8P13535 1937 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms