RNA–Protein interactions for RNA: ENST00000634931.1

SMARCA2-231, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5 BASIC

Gene SMARCA2, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-231	ENST00000634931	TBC1D2B	Q9UPU7	963 aa		10.25	□□□□□ -0.77
SMARCA2-231	ENST00000634931	SLF2	Q8IX21	1173 aa		10.24	□□□□□ -0.77
SMARCA2-231	ENST00000634931	PBX2	P40425	430 aa		10.23	□□□□□ -0.77
SMARCA2-231	ENST00000634931	SAMD7	Q7Z3H4	446 aa		10.23	□□□□□ -0.77
SMARCA2-231	ENST00000634931	VPS9D1	Q9Y2B5	631 aa		10.23	□□□□□ -0.77
SMARCA2-231	ENST00000634931	RNF40	O75150	1001 aa		10.22	□□□□□ -0.77
SMARCA2-231	ENST00000634931	CFH	P08603	1231 aa		10.22	□□□□□ -0.77
SMARCA2-231	ENST00000634931	RB1CC1	Q8TDY2	1594 aa		10.22	□□□□□ -0.77
SMARCA2-231	ENST00000634931	FUT2	Q10981	343 aa		10.21	□□□□□ -0.77
SMARCA2-231	ENST00000634931	MTMR2	Q13614	643 aa		10.21	□□□□□ -0.77
SMARCA2-231	ENST00000634931	TSC1	Q92574	1164 aa		10.21	□□□□□ -0.77
SMARCA2-231	ENST00000634931	GRIPAP1	Q4V328	841 aa		10.2	□□□□□ -0.78
SMARCA2-231	ENST00000634931	NBPF3	Q9H094	633 aa		10.2	□□□□□ -0.78
SMARCA2-231	ENST00000634931	C6orf229	H3BNL8	230 aa		10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	CTDSPL2	Q05D32	466 aa		10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	LAPTM4B	Q86VI4	370 aa		10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	HELB	Q8NG08	1087 aa	Predicted RBP	10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	GJD4	Q96KN9	370 aa	Predicted RBP	10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	PODXL2	Q9NZ53	605 aa		10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	NDUFB9	Q9Y6M9	179 aa		10.19	□□□□□ -0.78
SMARCA2-231	ENST00000634931	RNF166	Q96A37	237 aa	Predicted RBP	10.18	□□□□□ -0.78
SMARCA2-231	ENST00000634931	HMX1	Q9NP08	348 aa	Predicted RBP	10.18	□□□□□ -0.78
SMARCA2-231	ENST00000634931	POM121C	A8CG34	1229 aa		10.17	□□□□□ -0.78
SMARCA2-231	ENST00000634931	CFAP99	D6REC4	459 aa		10.17	□□□□□ -0.78
SMARCA2-231	ENST00000634931	TRIM26	Q12899	539 aa	Predicted RBP	10.17	□□□□□ -0.78
SMARCA2-231	ENST00000634931	ZNF687	Q8N1G0	1237 aa		10.17	□□□□□ -0.78
SMARCA2-231	ENST00000634931	PDIA4	P13667	645 aa	Known RBP	10.16	□□□□□ -0.78
SMARCA2-231	ENST00000634931	CALR3	Q96L12	384 aa	Known RBP	10.16	□□□□□ -0.78
SMARCA2-231	ENST00000634931	ATP6V1A	P38606	617 aa		10.15	□□□□□ -0.78
SMARCA2-231	ENST00000634931	KMT5B	Q4FZB7	885 aa		10.15	□□□□□ -0.78
SMARCA2-231	ENST00000634931	LRRN4	Q8WUT4	740 aa		10.15	□□□□□ -0.78
SMARCA2-231	ENST00000634931	SYMPK	Q92797	1274 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-231	ENST00000634931	GLMN	Q92990	594 aa		10.15	□□□□□ -0.78
SMARCA2-231	ENST00000634931	ZFR	Q96KR1	1074 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-231	ENST00000634931	IRF5	Q13568	498 aa		10.14	□□□□□ -0.79
SMARCA2-231	ENST00000634931	TRIM34	Q9BYJ4	488 aa		10.14	□□□□□ -0.79
SMARCA2-231	ENST00000634931	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.13	□□□□□ -0.79
SMARCA2-231	ENST00000634931	MRPL50	Q8N5N7	158 aa	Known RBP	10.13	□□□□□ -0.79
SMARCA2-231	ENST00000634931	PRR7	Q8TB68	274 aa		10.12	□□□□□ -0.79
SMARCA2-231	ENST00000634931	LRCH3	Q96II8	777 aa		10.12	□□□□□ -0.79
SMARCA2-231	ENST00000634931	NACAD	O15069	1562 aa		10.12	□□□□□ -0.79
SMARCA2-231	ENST00000634931	TK2	O00142	265 aa		10.11	□□□□□ -0.79
SMARCA2-231	ENST00000634931	MYT1L	Q9UL68	1186 aa		10.11	□□□□□ -0.79
SMARCA2-231	ENST00000634931	GPR37L1	O60883	481 aa		10.1	□□□□□ -0.79
SMARCA2-231	ENST00000634931	PUS10	Q3MIT2	529 aa	Known RBP	10.1	□□□□□ -0.79
SMARCA2-231	ENST00000634931	NECTIN2	Q92692	538 aa		10.1	□□□□□ -0.79
SMARCA2-231	ENST00000634931	WASHC4	Q2M389	1173 aa		10.09	□□□□□ -0.79
SMARCA2-231	ENST00000634931	MORN1	Q5T089	497 aa		10.09	□□□□□ -0.79
SMARCA2-231	ENST00000634931	EPS8L1	Q8TE68	723 aa		10.09	□□□□□ -0.79
SMARCA2-231	ENST00000634931	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.09	□□□□□ -0.79
SMARCA2-231	ENST00000634931	ACTN4	O43707	911 aa	Known RBP	10.08	□□□□□ -0.8
SMARCA2-231	ENST00000634931	HDGFL1	Q5TGJ6	251 aa		10.08	□□□□□ -0.8
SMARCA2-231	ENST00000634931	LSM11	P83369	360 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
SMARCA2-231	ENST00000634931	VAC14	Q08AM6	782 aa		10.07	□□□□□ -0.8
SMARCA2-231	ENST00000634931		Q3C1V9	767 aa		10.07	□□□□□ -0.8
SMARCA2-231	ENST00000634931	ADGRD1	Q6QNK2	874 aa		10.07	□□□□□ -0.8
SMARCA2-231	ENST00000634931	RETREG3	Q86VR2	466 aa		10.07	□□□□□ -0.8
SMARCA2-231	ENST00000634931	SLC27A5	Q9Y2P5	690 aa		10.07	□□□□□ -0.8
SMARCA2-231	ENST00000634931	PER1	O15534	1290 aa	Predicted RBP	10.06	□□□□□ -0.8
SMARCA2-231	ENST00000634931	NR6A1	Q15406	480 aa		10.06	□□□□□ -0.8
SMARCA2-231	ENST00000634931	ADAMTS19	Q8TE59	1207 aa		10.06	□□□□□ -0.8
SMARCA2-231	ENST00000634931	PRR14	Q9BWN1	585 aa		10.05	□□□□□ -0.8
SMARCA2-231	ENST00000634931	GOLGA8CP	A6NN73	597 aa		10.04	□□□□□ -0.8
SMARCA2-231	ENST00000634931	ANKK1	Q8NFD2	765 aa		10.04	□□□□□ -0.8
SMARCA2-231	ENST00000634931	STAC3	Q96MF2	364 aa		10.04	□□□□□ -0.8
SMARCA2-231	ENST00000634931	ZBTB7C	A1YPR0	619 aa		10.03	□□□□□ -0.8
SMARCA2-231	ENST00000634931	RETREG2	Q8NC44	543 aa		10.03	□□□□□ -0.8
SMARCA2-231	ENST00000634931	UNC13A	Q9UPW8	1703 aa		10.02	□□□□□ -0.8
SMARCA2-231	ENST00000634931	HR	O43593	1189 aa		10.02	□□□□□ -0.81
SMARCA2-231	ENST00000634931	PPP1R15A	O75807	674 aa	Predicted RBP	10.02	□□□□□ -0.81
SMARCA2-231	ENST00000634931	RNF19B	Q6ZMZ0	732 aa		10.02	□□□□□ -0.81
SMARCA2-231	ENST00000634931	TRAIP	Q9BWF2	469 aa		10.02	□□□□□ -0.81
SMARCA2-231	ENST00000634931	HPS5	Q9UPZ3	1129 aa		10.02	□□□□□ -0.81
SMARCA2-231	ENST00000634931	PPP4C	P60510	307 aa		10.01	□□□□□ -0.81
SMARCA2-231	ENST00000634931	DESI1	Q6ICB0	168 aa		10.01	□□□□□ -0.81
SMARCA2-231	ENST00000634931	BLOC1S3	Q6QNY0	202 aa		10.01	□□□□□ -0.81
SMARCA2-231	ENST00000634931	BCAM	P50895	628 aa		10	□□□□□ -0.81
SMARCA2-231	ENST00000634931	APLP1	P51693	650 aa		10	□□□□□ -0.81
SMARCA2-231	ENST00000634931	SOWAHB	A6NEL2	793 aa		9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	LYPD8	Q6UX82	237 aa		9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	ANKRD13D	Q6ZTN6	518 aa		9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	PNMA1	Q8ND90	353 aa		9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	USB1	Q9BQ65	265 aa	Known RBP	9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	ALG2	Q9H553	416 aa		9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	ACIN1	Q9UKV3	1341 aa	Known RBP	9.99	□□□□□ -0.81
SMARCA2-231	ENST00000634931	RFX1	P22670	979 aa		9.98	□□□□□ -0.81
SMARCA2-231	ENST00000634931	BRICD5	Q6PL45	260 aa		9.97	□□□□□ -0.81
SMARCA2-231	ENST00000634931	PBXIP1	Q96AQ6	731 aa		9.97	□□□□□ -0.81
SMARCA2-231	ENST00000634931	PPP1R12C	Q9BZL4	782 aa		9.97	□□□□□ -0.81
SMARCA2-231	ENST00000634931	TSR3	Q9UJK0	312 aa	Known RBP	9.97	□□□□□ -0.81
SMARCA2-231	ENST00000634931	PCDHB3	Q9Y5E6	796 aa		9.97	□□□□□ -0.81
SMARCA2-231	ENST00000634931	NR1I2	O75469	434 aa		9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	FMNL1	O95466	1100 aa	Predicted RBP	9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	SOX11	P35716	441 aa		9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	CFAP70	Q5T0N1	1121 aa		9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	SCUBE3	Q8IX30	993 aa		9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	WNT2B	Q93097	391 aa		9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	SALL2	Q9Y467	1007 aa	Predicted RBP	9.96	□□□□□ -0.82
SMARCA2-231	ENST00000634931	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	9.95	□□□□□ -0.82
SMARCA2-231	ENST00000634931	SEMA3F	Q13275	785 aa		9.95	□□□□□ -0.82

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