RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 EVX2Q03828 476 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 C3orf67Q6ZVT6 689 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 NUTM1Q86Y26 1132 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 PELP1Q8IZL8 1130 aaKnown RBP7.53□□□□□ -1.2
CDRT1-208ENST00000630868 CDCA7LQ96GN5 454 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 ADAM33Q9BZ11 813 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 NDUFB9Q9Y6M9 179 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 GRIN2BQ13224 1484 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 FGD5Q6ZNL6 1462 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 CSB-PGBD3P0DP91 1061 aa7.52□□□□□ -1.21
CDRT1-208ENST00000630868 CHMP7Q8WUX9 453 aaPredicted RBP7.52□□□□□ -1.21
CDRT1-208ENST00000630868 ZDHHC16Q969W1 377 aa7.52□□□□□ -1.21
CDRT1-208ENST00000630868 HMX1Q9NP08 348 aaPredicted RBP7.52□□□□□ -1.21
CDRT1-208ENST00000630868 GAPVD1Q14C86 1478 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 GJA5P36382 358 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 EYA1Q99502 592 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 PPP1R12CQ9BZL4 782 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 CUX1P39880 1505 aa7.51□□□□□ -1.21
CDRT1-208ENST00000630868 TRIM34Q9BYJ4 488 aa7.5□□□□□ -1.21
CDRT1-208ENST00000630868 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
CDRT1-208ENST00000630868 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
CDRT1-208ENST00000630868 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
CDRT1-208ENST00000630868 CLCN6P51797 869 aa7.49□□□□□ -1.21
CDRT1-208ENST00000630868 VAC14Q08AM6 782 aa7.49□□□□□ -1.21
CDRT1-208ENST00000630868 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
CDRT1-208ENST00000630868 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
CDRT1-208ENST00000630868 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
CDRT1-208ENST00000630868 UCN2Q96RP3 112 aa7.49□□□□□ -1.21
CDRT1-208ENST00000630868 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
CDRT1-208ENST00000630868 PRPF38BQ5VTL8 546 aaKnown RBP7.48□□□□□ -1.21
CDRT1-208ENST00000630868 TMEM88BA6NKF7 163 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 E9PSI1 815 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 COL9A1P20849 921 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 CCDC27Q2M243 656 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 WASHC4Q2M389 1173 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 SND1Q7KZF4 910 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDRT1-208ENST00000630868 TSKSQ9UJT2 592 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 ABCA10Q8WWZ4 1543 aa7.47□□□□□ -1.21
CDRT1-208ENST00000630868 ALG2Q9H553 416 aa7.46□□□□□ -1.22
CDRT1-208ENST00000630868 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
CDRT1-208ENST00000630868 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.22
CDRT1-208ENST00000630868 ABCA5Q8WWZ7 1642 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 NUP160Q12769 1436 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 HOXA2O43364 376 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 DNAJB2P25686 324 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 LMOD1P29536 600 aaPredicted RBP7.45□□□□□ -1.22
CDRT1-208ENST00000630868 CTDSPL2Q05D32 466 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 PCDHGC3Q9UN70 934 aa7.45□□□□□ -1.22
CDRT1-208ENST00000630868 KDM4AO75164 1064 aa7.44□□□□□ -1.22
CDRT1-208ENST00000630868 NUDT18Q6ZVK8 323 aa7.44□□□□□ -1.22
CDRT1-208ENST00000630868 LRRN4Q8WUT4 740 aa7.44□□□□□ -1.22
CDRT1-208ENST00000630868 KHSRPQ92945 711 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDRT1-208ENST00000630868 HLA-CQ95604 372 aa7.44□□□□□ -1.22
CDRT1-208ENST00000630868 ERCC6L2Q5T890 1561 aa7.44□□□□□ -1.22
CDRT1-208ENST00000630868 GRIN2AQ12879 1464 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 ATG7O95352 703 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 NUDT7P0C024 238 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 GUCA2AQ02747 115 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 CDCA8Q53HL2 280 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 RDH13Q8NBN7 331 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 EPS8L1Q8TE68 723 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 VRTNQ9H8Y1 702 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 TFIP11Q9UBB9 837 aaKnown RBP7.43□□□□□ -1.22
CDRT1-208ENST00000630868 AMOTL2Q9Y2J4 779 aa7.43□□□□□ -1.22
CDRT1-208ENST00000630868 CEP170Q5SW79 1584 aa7.42□□□□□ -1.22
CDRT1-208ENST00000630868 SHROOM2Q13796 1616 aa7.42□□□□□ -1.22
CDRT1-208ENST00000630868 HAX1O00165 279 aa7.42□□□□□ -1.22
CDRT1-208ENST00000630868 FDX1P10109 184 aa7.42□□□□□ -1.22
CDRT1-208ENST00000630868 SLC39A7Q92504 469 aa7.42□□□□□ -1.22
CDRT1-208ENST00000630868 MAFBQ9Y5Q3 323 aaPredicted RBP7.42□□□□□ -1.22
CDRT1-208ENST00000630868 NBPF26B4DH59 902 aa7.41□□□□□ -1.22
CDRT1-208ENST00000630868 ADAMTS12P58397 1594 aa7.41□□□□□ -1.22
CDRT1-208ENST00000630868 POTEHQ6S545 545 aa7.4□□□□□ -1.22
CDRT1-208ENST00000630868 TATDN2Q93075 761 aa7.4□□□□□ -1.22
CDRT1-208ENST00000630868 PNMA3Q9UL41 463 aa7.4□□□□□ -1.22
CDRT1-208ENST00000630868 KIF13AQ9H1H9 1805 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 GCGRP47871 477 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 USP46P62068 366 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 TBC1D9Q6ZT07 1266 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 TSC1Q92574 1164 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 METRNQ9UJH8 293 aa7.39□□□□□ -1.23
CDRT1-208ENST00000630868 GNEQ9Y223 722 aaKnown RBP7.39□□□□□ -1.23
CDRT1-208ENST00000630868 FHAD1B1AJZ9 1412 aa7.38□□□□□ -1.23
CDRT1-208ENST00000630868 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
CDRT1-208ENST00000630868 PPP1R3GB7ZBB8 358 aa7.38□□□□□ -1.23
CDRT1-208ENST00000630868 SMAPO00193 183 aa7.38□□□□□ -1.23
CDRT1-208ENST00000630868 ARSIQ5FYB1 569 aa7.38□□□□□ -1.23
CDRT1-208ENST00000630868 HELBQ8NG08 1087 aaPredicted RBP7.38□□□□□ -1.23
CDRT1-208ENST00000630868 TRIM6-TRIM34B2RNG4 842 aa7.37□□□□□ -1.23
CDRT1-208ENST00000630868 C7P10643 843 aa7.37□□□□□ -1.23
CDRT1-208ENST00000630868 MTMR2Q13614 643 aa7.37□□□□□ -1.23
CDRT1-208ENST00000630868 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.37□□□□□ -1.23
CDRT1-208ENST00000630868 ZMIZ1Q9ULJ6 1067 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms