RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.04
FARP1-242ENST00000627049 HMGN5P82970 282 aaKnown RBP21.57■■□□□ 1.04
FARP1-242ENST00000627049 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
FARP1-242ENST00000627049 CWC22Q9HCG8 908 aaKnown RBP21.56■■□□□ 1.04
FARP1-242ENST00000627049 C8orf34Q49A92 452 aa21.56■■□□□ 1.04
FARP1-242ENST00000627049 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
FARP1-242ENST00000627049 HSP90B1P14625 803 aaKnown RBP21.55■■□□□ 1.04
FARP1-242ENST00000627049 GGNBP2Q9H3C7 697 aa21.55■■□□□ 1.04
FARP1-242ENST00000627049 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
FARP1-242ENST00000627049 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
FARP1-242ENST00000627049 ZNF592Q92610 1267 aa21.55■■□□□ 1.04
FARP1-242ENST00000627049 TSPY26PQ9H489 355 aa21.54■■□□□ 1.04
FARP1-242ENST00000627049 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
FARP1-242ENST00000627049 BECN2A8MW95 431 aa21.54■■□□□ 1.04
FARP1-242ENST00000627049 RARSP54136 660 aaKnown RBP21.53■■□□□ 1.04
FARP1-242ENST00000627049 IGHDP01880 384 aa21.53■■□□□ 1.04
FARP1-242ENST00000627049 GNL2Q13823 731 aaKnown RBP21.53■■□□□ 1.04
FARP1-242ENST00000627049 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
FARP1-242ENST00000627049 UQCRHLA0A096LP55 91 aa21.53■■□□□ 1.04
FARP1-242ENST00000627049 UQCRHP07919 91 aa21.53■■□□□ 1.04
FARP1-242ENST00000627049 TBC1D32Q96NH3 1257 aa21.53■■□□□ 1.04
FARP1-242ENST00000627049 NEK4P51957 841 aa21.52■■□□□ 1.04
FARP1-242ENST00000627049 RNF123Q5XPI4 1314 aa21.52■■□□□ 1.04
FARP1-242ENST00000627049 CLCN1P35523 988 aa21.52■■□□□ 1.04
FARP1-242ENST00000627049 SMC3Q9UQE7 1217 aa21.52■■□□□ 1.04
FARP1-242ENST00000627049 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
FARP1-242ENST00000627049 MCM2P49736 904 aa21.51■■□□□ 1.03
FARP1-242ENST00000627049 CHMP3Q9Y3E7 222 aa21.51■■□□□ 1.03
FARP1-242ENST00000627049 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
FARP1-242ENST00000627049 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
FARP1-242ENST00000627049 KIF3AQ9Y496 699 aa21.5■■□□□ 1.03
FARP1-242ENST00000627049 XRCC6P12956 609 aaKnown RBP eCLIP21.5■■□□□ 1.035e-8■■■■□ 22.3
FARP1-242ENST00000627049 COG3Q96JB2 828 aa21.5■■□□□ 1.03
FARP1-242ENST00000627049 TPM3P06753 285 aa21.49■■□□□ 1.03
FARP1-242ENST00000627049 RUFY2Q8WXA3 655 aa21.49■■□□□ 1.03
FARP1-242ENST00000627049 PDCL3Q9H2J4 239 aa21.49■■□□□ 1.03
FARP1-242ENST00000627049 H3BQV1 296 aa21.48■■□□□ 1.03
FARP1-242ENST00000627049 HMOX1P09601 288 aa21.48■■□□□ 1.03
FARP1-242ENST00000627049 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
FARP1-242ENST00000627049 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
FARP1-242ENST00000627049 IFT57Q9NWB7 429 aa21.48■■□□□ 1.03
FARP1-242ENST00000627049 VPS37CA5D8V6 355 aaPredicted RBP21.47■■□□□ 1.03
FARP1-242ENST00000627049 ZKSCAN1P17029 563 aaPredicted RBP21.47■■□□□ 1.03
FARP1-242ENST00000627049 TNPO1Q92973 898 aaKnown RBP21.47■■□□□ 1.03
FARP1-242ENST00000627049 LETM1O95202 739 aaPredicted RBP21.47■■□□□ 1.03
FARP1-242ENST00000627049 LMOD2Q6P5Q4 547 aa21.47■■□□□ 1.03
FARP1-242ENST00000627049 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
FARP1-242ENST00000627049 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
FARP1-242ENST00000627049 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
FARP1-242ENST00000627049 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
FARP1-242ENST00000627049 SF3A1Q15459 793 aaKnown RBP21.45■■□□□ 1.03
FARP1-242ENST00000627049 FAM184AQ8NB25 1140 aa21.45■■□□□ 1.02
FARP1-242ENST00000627049 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
FARP1-242ENST00000627049 DHX29Q7Z478 1369 aaKnown RBP21.44■■□□□ 1.02
FARP1-242ENST00000627049 TMEM57Q8N5G2 664 aa21.43■■□□□ 1.02
FARP1-242ENST00000627049 BICD2Q8TD16 824 aa21.43■■□□□ 1.02
FARP1-242ENST00000627049 ZMYND15Q9H091 742 aa21.43■■□□□ 1.02
FARP1-242ENST00000627049 MLECQ14165 292 aa21.43■■□□□ 1.02
FARP1-242ENST00000627049 PANK2Q9BZ23 570 aa21.42■■□□□ 1.02
FARP1-242ENST00000627049 SASS6Q6UVJ0 657 aa21.42■■□□□ 1.02
FARP1-242ENST00000627049 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
FARP1-242ENST00000627049 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.42■■□□□ 1.02
FARP1-242ENST00000627049 PARD3Q8TEW0 1356 aa21.41■■□□□ 1.02
FARP1-242ENST00000627049 PRKAR2BP31323 418 aa21.41■■□□□ 1.02
FARP1-242ENST00000627049 AMPHP49418 695 aa21.41■■□□□ 1.02
FARP1-242ENST00000627049 TWISTNBQ3B726 338 aaPredicted RBP21.41■■□□□ 1.02
FARP1-242ENST00000627049 ERC2O15083 957 aa21.4■■□□□ 1.02
FARP1-242ENST00000627049 FKBP5Q13451 457 aaPredicted RBP21.4■■□□□ 1.02
FARP1-242ENST00000627049 MPNDQ8N594 471 aa21.4■■□□□ 1.02
FARP1-242ENST00000627049 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
FARP1-242ENST00000627049 GOLGA6L1Q8N7Z2 621 aa21.39■■□□□ 1.01
FARP1-242ENST00000627049 SSFA2P28290 1259 aa21.38■■□□□ 1.01
FARP1-242ENST00000627049 CUL7Q14999 1698 aa21.38■■□□□ 1.01
FARP1-242ENST00000627049 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
FARP1-242ENST00000627049 DISP3Q9P2K9 1392 aa21.37■■□□□ 1.01
FARP1-242ENST00000627049 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
FARP1-242ENST00000627049 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
FARP1-242ENST00000627049 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
FARP1-242ENST00000627049 RALGAPBQ86X10 1494 aa21.37■■□□□ 1.01
FARP1-242ENST00000627049 SYCE3A1L190 88 aa21.36■■□□□ 1.01
FARP1-242ENST00000627049 TEX35Q5T0J7 233 aa21.36■■□□□ 1.01
FARP1-242ENST00000627049 CCDC27Q2M243 656 aa21.36■■□□□ 1.01
FARP1-242ENST00000627049 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
FARP1-242ENST00000627049 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
FARP1-242ENST00000627049 FIBPO43427 364 aa21.35■■□□□ 1.01
FARP1-242ENST00000627049 TMPOP42166 694 aaKnown RBP21.35■■□□□ 1.01
FARP1-242ENST00000627049 CCDC34Q96HJ3 373 aa21.35■■□□□ 1.01
FARP1-242ENST00000627049 TRIM5Q9C035 493 aa21.35■■□□□ 1.01
FARP1-242ENST00000627049 NESP48681 1621 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 RNF20Q5VTR2 975 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 HOMER1Q86YM7 354 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 AFAP1Q8N556 730 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 PCDHB15Q9Y5E8 787 aa21.34■■□□□ 1.01
FARP1-242ENST00000627049 TPD52L1Q16890 204 aaPredicted RBP21.33■■□□□ 1.01
FARP1-242ENST00000627049 SYNJ2O15056 1496 aa21.33■■□□□ 1
FARP1-242ENST00000627049 NECTIN2Q92692 538 aa21.33■■□□□ 1
FARP1-242ENST00000627049 IFIT2P09913 472 aaKnown RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms