RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 IRF6O14896 467 aa11.69□□□□□ -0.54
USB1-216ENST00000624720 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
USB1-216ENST00000624720 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
USB1-216ENST00000624720 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
USB1-216ENST00000624720 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
USB1-216ENST00000624720 PRR29P0C7W0 189 aa11.68□□□□□ -0.54
USB1-216ENST00000624720 YY1AP1Q9H869 796 aa11.68□□□□□ -0.54
USB1-216ENST00000624720 KIAA1107Q9UPP5 1409 aa11.67□□□□□ -0.54
USB1-216ENST00000624720 GCC2Q8IWJ2 1684 aa11.67□□□□□ -0.54
USB1-216ENST00000624720 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
USB1-216ENST00000624720 PREX2Q70Z35 1606 aa11.67□□□□□ -0.54
USB1-216ENST00000624720 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
USB1-216ENST00000624720 TCERG1O14776 1098 aaKnown RBP11.66□□□□□ -0.54
USB1-216ENST00000624720 CARD11Q9BXL7 1154 aa11.66□□□□□ -0.54
USB1-216ENST00000624720 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
USB1-216ENST00000624720 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.54
USB1-216ENST00000624720 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
USB1-216ENST00000624720 ABCA9Q8IUA7 1624 aa11.65□□□□□ -0.54
USB1-216ENST00000624720 NBPF11Q86T75 865 aa11.65□□□□□ -0.55
USB1-216ENST00000624720 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
USB1-216ENST00000624720 MYO5CQ9NQX4 1742 aa11.63□□□□□ -0.55
USB1-216ENST00000624720 TTC36A6NLP5 189 aa11.63□□□□□ -0.55
USB1-216ENST00000624720 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
USB1-216ENST00000624720 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
USB1-216ENST00000624720 FAM13BQ9NYF5 915 aa11.63□□□□□ -0.55
USB1-216ENST00000624720 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
USB1-216ENST00000624720 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
USB1-216ENST00000624720 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
USB1-216ENST00000624720 GOLGA6L3A6NEY3 463 aa11.62□□□□□ -0.55
USB1-216ENST00000624720 CCDC144AA2RUR9 1427 aa11.62□□□□□ -0.55
USB1-216ENST00000624720 EP400NLQ6ZTU2 488 aa11.61□□□□□ -0.55
USB1-216ENST00000624720 ANP32CO43423 234 aa11.61□□□□□ -0.55
USB1-216ENST00000624720 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
USB1-216ENST00000624720 ST20-MTHFSA0A0A6YYL1 179 aa11.61□□□□□ -0.55
USB1-216ENST00000624720 KIAA1211Q6ZU35 1233 aa11.6□□□□□ -0.55
USB1-216ENST00000624720 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
USB1-216ENST00000624720 SHANK2Q9UPX8 1470 aa11.6□□□□□ -0.55
USB1-216ENST00000624720 CFAP74Q9C0B2 1584 aa11.59□□□□□ -0.55
USB1-216ENST00000624720 ABCC1P33527 1531 aa11.59□□□□□ -0.55
USB1-216ENST00000624720 LMOD3Q0VAK6 560 aa11.59□□□□□ -0.55
USB1-216ENST00000624720 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
USB1-216ENST00000624720 ZNF500O60304 480 aaPredicted RBP11.58□□□□□ -0.56
USB1-216ENST00000624720 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
USB1-216ENST00000624720 RIPK4P57078 832 aa11.58□□□□□ -0.56
USB1-216ENST00000624720 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
USB1-216ENST00000624720 ADGBQ8N7X0 1667 aa11.58□□□□□ -0.56
USB1-216ENST00000624720 GOLIM4O00461 696 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 ARAP3Q8WWN8 1544 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 ARHGEF5Q12774 1597 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
USB1-216ENST00000624720 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 NEO1Q92859 1461 aa11.57□□□□□ -0.56
USB1-216ENST00000624720 MAP2K1Q02750 393 aaPredicted RBP11.56□□□□□ -0.56
USB1-216ENST00000624720 TMC1Q8TDI8 760 aa11.56□□□□□ -0.56
USB1-216ENST00000624720 USP47Q96K76 1375 aa11.56□□□□□ -0.56
USB1-216ENST00000624720 LOC102724159A0A0B4J2E5 919 aa11.56□□□□□ -0.56
USB1-216ENST00000624720 PWP2Q15269 919 aaKnown RBP11.56□□□□□ -0.56
USB1-216ENST00000624720 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
USB1-216ENST00000624720 ESPNB1AK53 854 aa11.55□□□□□ -0.56
USB1-216ENST00000624720 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
USB1-216ENST00000624720 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
USB1-216ENST00000624720 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
USB1-216ENST00000624720 TERF1P54274 439 aa11.54□□□□□ -0.56
USB1-216ENST00000624720 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
USB1-216ENST00000624720 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
USB1-216ENST00000624720 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
USB1-216ENST00000624720 KANK1Q14678 1352 aa11.54□□□□□ -0.56
USB1-216ENST00000624720 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
USB1-216ENST00000624720 SATB1Q01826 763 aa11.53□□□□□ -0.56
USB1-216ENST00000624720 CCDC94Q9BW85 323 aaPredicted RBP11.53□□□□□ -0.56
USB1-216ENST00000624720 STK26Q9P289 416 aa11.53□□□□□ -0.56
USB1-216ENST00000624720 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
USB1-216ENST00000624720 KDM4AO75164 1064 aa11.53□□□□□ -0.56
USB1-216ENST00000624720 FAM177A1Q8N128 213 aaPredicted RBP11.53□□□□□ -0.56
USB1-216ENST00000624720 RNF217Q8TC41 542 aa11.53□□□□□ -0.56
USB1-216ENST00000624720 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
USB1-216ENST00000624720 UGGT1Q9NYU2 1555 aa11.52□□□□□ -0.56
USB1-216ENST00000624720 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.56
USB1-216ENST00000624720 OTUD6BQ8N6M0 293 aa11.52□□□□□ -0.57
USB1-216ENST00000624720 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
USB1-216ENST00000624720 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
USB1-216ENST00000624720 ZFYVE16Q7Z3T8 1539 aa11.52□□□□□ -0.57
USB1-216ENST00000624720 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
USB1-216ENST00000624720 KCNJ4P48050 445 aa11.52□□□□□ -0.57
USB1-216ENST00000624720 CFAP70Q5T0N1 1121 aa11.52□□□□□ -0.57
USB1-216ENST00000624720 TMEM132EQ6IEE7 984 aa11.52□□□□□ -0.57
USB1-216ENST00000624720 CASC1Q6TDU7 716 aa11.51□□□□□ -0.57
USB1-216ENST00000624720 TERF2IPQ9NYB0 399 aa11.5□□□□□ -0.57
USB1-216ENST00000624720 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
USB1-216ENST00000624720 A2MP01023 1474 aa11.5□□□□□ -0.57
USB1-216ENST00000624720 ZNF518AQ6AHZ1 1483 aa11.5□□□□□ -0.57
USB1-216ENST00000624720 ERBINQ96RT1 1412 aa11.5□□□□□ -0.57
USB1-216ENST00000624720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
USB1-216ENST00000624720 CCDC7Q96M83 1385 aa11.49□□□□□ -0.57
USB1-216ENST00000624720 ADGRF5Q8IZF2 1346 aa11.49□□□□□ -0.57
USB1-216ENST00000624720 POGZQ7Z3K3 1410 aa11.49□□□□□ -0.57
USB1-216ENST00000624720 RAI14Q9P0K7 980 aa11.49□□□□□ -0.57
USB1-216ENST00000624720 CEP83Q9Y592 693 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms