RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 GOLGA6L3A6NEY3 463 aa11.57□□□□□ -0.56
SRGAP2B-204ENST00000612199 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
SRGAP2B-204ENST00000612199 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
SRGAP2B-204ENST00000612199 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
SRGAP2B-204ENST00000612199 TPM3P06753 285 aa11.56□□□□□ -0.56
SRGAP2B-204ENST00000612199 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
SRGAP2B-204ENST00000612199 CC2D2AQ9P2K1 1620 aa11.56□□□□□ -0.56
SRGAP2B-204ENST00000612199 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 FYB1O15117 783 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 ST18O60284 1047 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 AMOTL1Q8IY63 956 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 MTHFSP49914 203 aa11.55□□□□□ -0.56
SRGAP2B-204ENST00000612199 FOXD4L6Q3SYB3 417 aaPredicted RBP11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 FOXD4L3Q6VB84 417 aaPredicted RBP11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 CNTLNQ9NXG0 1405 aa11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 UQCRHP07919 91 aa11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
SRGAP2B-204ENST00000612199 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 ANKRD62A6NC57 917 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 NEBLO76041 1014 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 PANK1Q8TE04 598 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 FANCIQ9NVI1 1328 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
SRGAP2B-204ENST00000612199 RAPGEF3O95398 923 aa11.52□□□□□ -0.56
SRGAP2B-204ENST00000612199 DDX19BQ9UMR2 479 aa11.52□□□□□ -0.57
SRGAP2B-204ENST00000612199 TOP2BQ02880 1626 aa11.52□□□□□ -0.57
SRGAP2B-204ENST00000612199 SLC12A5Q9H2X9 1139 aa11.52□□□□□ -0.57
SRGAP2B-204ENST00000612199 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
SRGAP2B-204ENST00000612199 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.57
SRGAP2B-204ENST00000612199 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
SRGAP2B-204ENST00000612199 C9orf78Q9NZ63 289 aaPredicted RBP11.51□□□□□ -0.57
SRGAP2B-204ENST00000612199 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
SRGAP2B-204ENST00000612199 AAMPQ13685 434 aa11.51□□□□□ -0.57
SRGAP2B-204ENST00000612199 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
SRGAP2B-204ENST00000612199 MRC2Q9UBG0 1479 aa11.51□□□□□ -0.57
SRGAP2B-204ENST00000612199 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 GSE1Q14687 1217 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 TTC5Q8N0Z6 440 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 C9orf84Q5VXU9 1444 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 NLRP6P59044 892 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 PRAM1Q96QH2 718 aa11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
SRGAP2B-204ENST00000612199 NAP1L1P55209 391 aaKnown RBP11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 TXNDC2Q86VQ3 553 aa11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 TCP11L2Q8N4U5 519 aa11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 TPM2P07951 284 aa11.49□□□□□ -0.57
SRGAP2B-204ENST00000612199 TTLL12Q14166 644 aaPredicted RBP11.48□□□□□ -0.57
SRGAP2B-204ENST00000612199 STK11IPQ8N1F8 1099 aa11.48□□□□□ -0.57
SRGAP2B-204ENST00000612199 PPP2R1AP30153 589 aa11.48□□□□□ -0.57
SRGAP2B-204ENST00000612199 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
SRGAP2B-204ENST00000612199 BRD4O60885 1362 aaPredicted RBP11.48□□□□□ -0.57
SRGAP2B-204ENST00000612199 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 CDK13Q14004 1512 aaKnown RBP11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 KIF16BQ96L93 1317 aa11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 PHF14O94880 888 aa11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 AIMP1Q12904 312 aaKnown RBP11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 NLRP2Q9NX02 1062 aa11.47□□□□□ -0.57
SRGAP2B-204ENST00000612199 TROQ12816 1431 aaPredicted RBP11.46□□□□□ -0.57
SRGAP2B-204ENST00000612199 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
SRGAP2B-204ENST00000612199 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
SRGAP2B-204ENST00000612199 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
SRGAP2B-204ENST00000612199 ATP6V1DQ9Y5K8 247 aa11.46□□□□□ -0.57
SRGAP2B-204ENST00000612199 REC8O95072 547 aa11.46□□□□□ -0.58
SRGAP2B-204ENST00000612199 MATR3P43243 847 aaKnown RBP eCLIP11.46□□□□□ -0.58
SRGAP2B-204ENST00000612199 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 NEFHP12036 1026 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 PUS7Q96PZ0 661 aaKnown RBP11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 GNAI1P63096 354 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 EP400NLQ6ZTU2 488 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 KDM4AO75164 1064 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 PRKAR2BP31323 418 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 ABTB2Q8N961 1025 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
SRGAP2B-204ENST00000612199 ATF3P18847 181 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 DIAPH3Q9NSV4 1193 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 CABP1Q9NZU7 370 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 HFM1A2PYH4 1435 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 EFCAB5A4FU69 1503 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 SF3A1Q15459 793 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms