RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
ZNF559-213ENST00000603380 ZSCAN23Q3MJ62 389 aa13.93□□□□□ -0.18
ZNF559-213ENST00000603380 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
ZNF559-213ENST00000603380 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
ZNF559-213ENST00000603380 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
ZNF559-213ENST00000603380 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
ZNF559-213ENST00000603380 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
ZNF559-213ENST00000603380 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
ZNF559-213ENST00000603380 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
ZNF559-213ENST00000603380 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
ZNF559-213ENST00000603380 TSC1Q92574 1164 aa13.91□□□□□ -0.18
ZNF559-213ENST00000603380 KIF2CQ99661 725 aa13.91□□□□□ -0.18
ZNF559-213ENST00000603380 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
ZNF559-213ENST00000603380 NUP155O75694 1391 aa13.91□□□□□ -0.18
ZNF559-213ENST00000603380 WDR62O43379 1518 aa13.9□□□□□ -0.18
ZNF559-213ENST00000603380 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
ZNF559-213ENST00000603380 WDR7Q9Y4E6 1490 aa13.9□□□□□ -0.18
ZNF559-213ENST00000603380 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.18
ZNF559-213ENST00000603380 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
ZNF559-213ENST00000603380 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
ZNF559-213ENST00000603380 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
ZNF559-213ENST00000603380 CCDC39Q9UFE4 941 aa13.9□□□□□ -0.18
ZNF559-213ENST00000603380 LAMC1P11047 1609 aa13.9□□□□□ -0.18
ZNF559-213ENST00000603380 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZNF559-213ENST00000603380 TMF1P82094 1093 aa13.89□□□□□ -0.19
ZNF559-213ENST00000603380 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
ZNF559-213ENST00000603380 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
ZNF559-213ENST00000603380 TAF7LQ5H9L4 462 aa13.89□□□□□ -0.19
ZNF559-213ENST00000603380 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
ZNF559-213ENST00000603380 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
ZNF559-213ENST00000603380 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
ZNF559-213ENST00000603380 VGLL3A8MV65 326 aa13.87□□□□□ -0.19
ZNF559-213ENST00000603380 K7ELQ4 463 aaPredicted RBP13.87□□□□□ -0.19
ZNF559-213ENST00000603380 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
ZNF559-213ENST00000603380 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
ZNF559-213ENST00000603380 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
ZNF559-213ENST00000603380 LMBRD1Q9NUN5 540 aa13.87□□□□□ -0.19
ZNF559-213ENST00000603380 PRIMPOLQ96LW4 560 aa13.87□□□□□ -0.19
ZNF559-213ENST00000603380 CROCC2H7BZ55 1655 aa13.86□□□□□ -0.19
ZNF559-213ENST00000603380 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
ZNF559-213ENST00000603380 HMGN5P82970 282 aaKnown RBP13.85□□□□□ -0.19
ZNF559-213ENST00000603380 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
ZNF559-213ENST00000603380 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
ZNF559-213ENST00000603380 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
ZNF559-213ENST00000603380 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
ZNF559-213ENST00000603380 ZBTB22O15209 634 aa13.84□□□□□ -0.19
ZNF559-213ENST00000603380 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
ZNF559-213ENST00000603380 BCL2L13Q9BXK5 485 aa13.83□□□□□ -0.2
ZNF559-213ENST00000603380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF559-213ENST00000603380 ASXL1Q8IXJ9 1541 aa13.83□□□□□ -0.2
ZNF559-213ENST00000603380 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
ZNF559-213ENST00000603380 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
ZNF559-213ENST00000603380 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
ZNF559-213ENST00000603380 PTPRGP23470 1445 aa13.83□□□□□ -0.2
ZNF559-213ENST00000603380 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
ZNF559-213ENST00000603380 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
ZNF559-213ENST00000603380 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
ZNF559-213ENST00000603380 FAM177BA6PVY3 158 aa13.82□□□□□ -0.2
ZNF559-213ENST00000603380 LRSAM1Q6UWE0 723 aa13.82□□□□□ -0.2
ZNF559-213ENST00000603380 GPT2Q8TD30 523 aa13.82□□□□□ -0.2
ZNF559-213ENST00000603380 CGNQ9P2M7 1197 aaKnown RBP13.82□□□□□ -0.2
ZNF559-213ENST00000603380 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
ZNF559-213ENST00000603380 IGSF3O75054 1194 aa13.82□□□□□ -0.2
ZNF559-213ENST00000603380 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
ZNF559-213ENST00000603380 KIF3AQ9Y496 699 aa13.81□□□□□ -0.2
ZNF559-213ENST00000603380 DNTTIP2Q5QJE6 756 aaKnown RBP13.81□□□□□ -0.2
ZNF559-213ENST00000603380 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
ZNF559-213ENST00000603380 A2MP01023 1474 aa13.81□□□□□ -0.2
ZNF559-213ENST00000603380 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
ZNF559-213ENST00000603380 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
ZNF559-213ENST00000603380 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
ZNF559-213ENST00000603380 ZBTB7CA1YPR0 619 aa13.8□□□□□ -0.2
ZNF559-213ENST00000603380 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
ZNF559-213ENST00000603380 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
ZNF559-213ENST00000603380 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
ZNF559-213ENST00000603380 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
ZNF559-213ENST00000603380 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
ZNF559-213ENST00000603380 SYNMO15061 1565 aa13.78□□□□□ -0.2
ZNF559-213ENST00000603380 SYCE3A1L190 88 aa13.78□□□□□ -0.2
ZNF559-213ENST00000603380 NOLC1Q14978 699 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZNF559-213ENST00000603380 ADCY10Q96PN6 1610 aa13.77□□□□□ -0.2
ZNF559-213ENST00000603380 NUCB2P80303 420 aa13.77□□□□□ -0.2
ZNF559-213ENST00000603380 PKP1Q13835 747 aa13.77□□□□□ -0.2
ZNF559-213ENST00000603380 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
ZNF559-213ENST00000603380 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
ZNF559-213ENST00000603380 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
ZNF559-213ENST00000603380 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
ZNF559-213ENST00000603380 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
ZNF559-213ENST00000603380 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
ZNF559-213ENST00000603380 RNF214Q8ND24 703 aa13.76□□□□□ -0.21
ZNF559-213ENST00000603380 ANKRD7Q92527 254 aa13.76□□□□□ -0.21
ZNF559-213ENST00000603380 IRX5P78411 483 aaPredicted RBP13.76□□□□□ -0.21
ZNF559-213ENST00000603380 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
ZNF559-213ENST00000603380 FKBP5Q13451 457 aaPredicted RBP13.75□□□□□ -0.21
ZNF559-213ENST00000603380 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
ZNF559-213ENST00000603380 NUCB1Q02818 461 aa13.75□□□□□ -0.21
ZNF559-213ENST00000603380 BMP2KLQ5H9B9 411 aa13.75□□□□□ -0.21
ZNF559-213ENST00000603380 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
ZNF559-213ENST00000603380 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
ZNF559-213ENST00000603380 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms