RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 WASHC2AQ641Q2 1341 aa19.43■□□□□ 0.7
PTPRS-205ENST00000588012 TPM1P09493 284 aa19.43■□□□□ 0.7
PTPRS-205ENST00000588012 BECN2A8MW95 431 aa19.42■□□□□ 0.7
PTPRS-205ENST00000588012 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
PTPRS-205ENST00000588012 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
PTPRS-205ENST00000588012 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
PTPRS-205ENST00000588012 SKOR2Q2VWA4 1001 aaPredicted RBP19.41■□□□□ 0.7
PTPRS-205ENST00000588012 PLEKHO1Q53GL0 409 aaPredicted RBP19.41■□□□□ 0.7
PTPRS-205ENST00000588012 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
PTPRS-205ENST00000588012 UBTFL1P0CB47 393 aaPredicted RBP19.41■□□□□ 0.7
PTPRS-205ENST00000588012 THEMISQ8N1K5 641 aaPredicted RBP19.41■□□□□ 0.7
PTPRS-205ENST00000588012 INTS3Q68E01 1043 aaKnown RBP19.4■□□□□ 0.7
PTPRS-205ENST00000588012 USP35Q9P2H5 1018 aa19.4■□□□□ 0.7
PTPRS-205ENST00000588012 CFAP70Q5T0N1 1121 aa19.39■□□□□ 0.69
PTPRS-205ENST00000588012 TSHZ2Q9NRE2 1034 aa19.39■□□□□ 0.69
PTPRS-205ENST00000588012 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
PTPRS-205ENST00000588012 CCDC27Q2M243 656 aa19.38■□□□□ 0.69
PTPRS-205ENST00000588012 CNTLNQ9NXG0 1405 aa19.38■□□□□ 0.69
PTPRS-205ENST00000588012 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
PTPRS-205ENST00000588012 WASHC4Q2M389 1173 aa19.38■□□□□ 0.69
PTPRS-205ENST00000588012 CCDC30Q5VVM6 783 aa19.37■□□□□ 0.69
PTPRS-205ENST00000588012 HOOK1Q9UJC3 728 aaKnown RBP19.37■□□□□ 0.69
PTPRS-205ENST00000588012 MTHFSP49914 203 aa19.36■□□□□ 0.69
PTPRS-205ENST00000588012 CCDC43Q96MW1 224 aaKnown RBP19.36■□□□□ 0.69
PTPRS-205ENST00000588012 STRN4Q9NRL3 753 aa19.36■□□□□ 0.69
PTPRS-205ENST00000588012 FYB1O15117 783 aa19.36■□□□□ 0.69
PTPRS-205ENST00000588012 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
PTPRS-205ENST00000588012 PCMTD1Q96MG8 357 aaPredicted RBP19.35■□□□□ 0.69
PTPRS-205ENST00000588012 RALYLQ86SE5 291 aaKnown RBP19.35■□□□□ 0.69
PTPRS-205ENST00000588012 NINLQ9Y2I6 1382 aa19.35■□□□□ 0.69
PTPRS-205ENST00000588012 ANKRD20A12PQ8NF67 263 aa19.35■□□□□ 0.69
PTPRS-205ENST00000588012 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
PTPRS-205ENST00000588012 TATP17735 454 aaPredicted RBP19.34■□□□□ 0.69
PTPRS-205ENST00000588012 AAMPQ13685 434 aa19.34■□□□□ 0.69
PTPRS-205ENST00000588012 ARID3AQ99856 593 aa19.34■□□□□ 0.69
PTPRS-205ENST00000588012 EHBP1L1Q8N3D4 1523 aa19.34■□□□□ 0.69
PTPRS-205ENST00000588012 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
PTPRS-205ENST00000588012 SAFBQ15424 915 aaKnown RBP eCLIP19.34■□□□□ 0.69
PTPRS-205ENST00000588012 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
PTPRS-205ENST00000588012 SAMD1Q6SPF0 538 aaPredicted RBP19.33■□□□□ 0.69
PTPRS-205ENST00000588012 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.69
PTPRS-205ENST00000588012 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
PTPRS-205ENST00000588012 EFCAB5A4FU69 1503 aa19.33■□□□□ 0.68
PTPRS-205ENST00000588012 SLC4A3P48751 1232 aa19.33■□□□□ 0.68
PTPRS-205ENST00000588012 SMC3Q9UQE7 1217 aa19.32■□□□□ 0.68
PTPRS-205ENST00000588012 SCAPERQ9BY12 1400 aa19.32■□□□□ 0.68
PTPRS-205ENST00000588012 CFTRP13569 1480 aa19.32■□□□□ 0.68
PTPRS-205ENST00000588012 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
PTPRS-205ENST00000588012 BICD2Q8TD16 824 aa19.32■□□□□ 0.68
PTPRS-205ENST00000588012 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
PTPRS-205ENST00000588012 NESP48681 1621 aa19.31■□□□□ 0.68
PTPRS-205ENST00000588012 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
PTPRS-205ENST00000588012 FAM177BA6PVY3 158 aa19.31■□□□□ 0.68
PTPRS-205ENST00000588012 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
PTPRS-205ENST00000588012 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
PTPRS-205ENST00000588012 GNAI3P08754 354 aa19.3■□□□□ 0.68
PTPRS-205ENST00000588012 CDK19Q9BWU1 502 aa19.3■□□□□ 0.68
PTPRS-205ENST00000588012 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
PTPRS-205ENST00000588012 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
PTPRS-205ENST00000588012 VPS37CA5D8V6 355 aaPredicted RBP19.3■□□□□ 0.68
PTPRS-205ENST00000588012 CNTROBQ8N137 903 aa19.3■□□□□ 0.68
PTPRS-205ENST00000588012 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
PTPRS-205ENST00000588012 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
PTPRS-205ENST00000588012 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
PTPRS-205ENST00000588012 BRMS1Q9HCU9 246 aa19.29■□□□□ 0.68
PTPRS-205ENST00000588012 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 ADAMTS8Q9UP79 889 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 FSD1Q9BTV5 496 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
PTPRS-205ENST00000588012 CCDC70Q6NSX1 233 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 FOSBP53539 338 aa19.28■□□□□ 0.68
PTPRS-205ENST00000588012 SF3B2Q13435 895 aaKnown RBP19.28■□□□□ 0.68
PTPRS-205ENST00000588012 CDC45O75419 566 aa19.27■□□□□ 0.68
PTPRS-205ENST00000588012 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
PTPRS-205ENST00000588012 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
PTPRS-205ENST00000588012 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
PTPRS-205ENST00000588012 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
PTPRS-205ENST00000588012 TOM1L2Q6ZVM7 507 aa19.27■□□□□ 0.68
PTPRS-205ENST00000588012 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
PTPRS-205ENST00000588012 CABP4P57796 275 aa19.27■□□□□ 0.67
PTPRS-205ENST00000588012 CLASRPQ8N2M8 674 aaKnown RBP19.26■□□□□ 0.67
PTPRS-205ENST00000588012 PSMA5P28066 241 aa19.26■□□□□ 0.67
PTPRS-205ENST00000588012 XBP1P17861 261 aa19.25■□□□□ 0.67
PTPRS-205ENST00000588012 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
PTPRS-205ENST00000588012 CCAR2Q8N163 923 aaKnown RBP19.25■□□□□ 0.67
PTPRS-205ENST00000588012 RTEL1-TNFRSF6BF6WH68 1400 aa19.25■□□□□ 0.67
PTPRS-205ENST00000588012 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
PTPRS-205ENST00000588012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.25■□□□□ 0.67
PTPRS-205ENST00000588012 TROQ12816 1431 aaPredicted RBP19.24■□□□□ 0.67
PTPRS-205ENST00000588012 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
PTPRS-205ENST00000588012 SURF6O75683 361 aaKnown RBP19.24■□□□□ 0.67
PTPRS-205ENST00000588012 DNAJC2Q99543 621 aaKnown RBP19.24■□□□□ 0.67
PTPRS-205ENST00000588012 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
PTPRS-205ENST00000588012 SART3Q15020 963 aaKnown RBP19.24■□□□□ 0.67
PTPRS-205ENST00000588012 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
PTPRS-205ENST00000588012 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
PTPRS-205ENST00000588012 TWISTNBQ3B726 338 aaPredicted RBP19.23■□□□□ 0.67
PTPRS-205ENST00000588012 ERC1Q8IUD2 1116 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms