RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 ERBINQ96RT1 1412 aa18.5■□□□□ 0.55
MBD1-212ENST00000585672 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
MBD1-212ENST00000585672 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
MBD1-212ENST00000585672 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 TRPM1Q7Z4N2 1603 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 RARSP54136 660 aaKnown RBP18.48■□□□□ 0.55
MBD1-212ENST00000585672 KIF2CQ99661 725 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 PLXNC1O60486 1568 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 ARHGAP31Q2M1Z3 1444 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 MAGI2Q86UL8 1455 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 ZBTB22O15209 634 aa18.48■□□□□ 0.55
MBD1-212ENST00000585672 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
MBD1-212ENST00000585672 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
MBD1-212ENST00000585672 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
MBD1-212ENST00000585672 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
MBD1-212ENST00000585672 ABCC2Q92887 1545 aa18.47■□□□□ 0.55
MBD1-212ENST00000585672 TMF1P82094 1093 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 PLCD3Q8N3E9 789 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 NUP155O75694 1391 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 SPDYE4A6NLX3 237 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 IGSF3O75054 1194 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 GTF2F1P35269 517 aaKnown RBP eCLIP18.46■□□□□ 0.551e-8■■■□□ 15.2
MBD1-212ENST00000585672 TAF3Q5VWG9 929 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
MBD1-212ENST00000585672 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
MBD1-212ENST00000585672 K7ELQ4 463 aaPredicted RBP18.45■□□□□ 0.54
MBD1-212ENST00000585672 MCTP1Q6DN14 999 aa18.45■□□□□ 0.54
MBD1-212ENST00000585672 FAM177BA6PVY3 158 aa18.45■□□□□ 0.54
MBD1-212ENST00000585672 LMBRD1Q9NUN5 540 aa18.45■□□□□ 0.54
MBD1-212ENST00000585672 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
MBD1-212ENST00000585672 CGNQ9P2M7 1197 aaKnown RBP18.44■□□□□ 0.54
MBD1-212ENST00000585672 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
MBD1-212ENST00000585672 PRIMPOLQ96LW4 560 aa18.44■□□□□ 0.54
MBD1-212ENST00000585672 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
MBD1-212ENST00000585672 DNTTIP2Q5QJE6 756 aaKnown RBP18.43■□□□□ 0.54
MBD1-212ENST00000585672 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
MBD1-212ENST00000585672 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
MBD1-212ENST00000585672 HMGN5P82970 282 aaKnown RBP18.42■□□□□ 0.54
MBD1-212ENST00000585672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
MBD1-212ENST00000585672 ANKRD50Q9ULJ7 1429 aa18.42■□□□□ 0.54
MBD1-212ENST00000585672 WDR7Q9Y4E6 1490 aa18.42■□□□□ 0.54
MBD1-212ENST00000585672 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
MBD1-212ENST00000585672 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
MBD1-212ENST00000585672 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
MBD1-212ENST00000585672 ADGRL2O95490 1459 aa18.41■□□□□ 0.54
MBD1-212ENST00000585672 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
MBD1-212ENST00000585672 ADGBQ8N7X0 1667 aa18.4■□□□□ 0.54
MBD1-212ENST00000585672 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
MBD1-212ENST00000585672 MVPQ14764 893 aaKnown RBP18.39■□□□□ 0.53
MBD1-212ENST00000585672 GPT2Q8TD30 523 aa18.39■□□□□ 0.53
MBD1-212ENST00000585672 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
MBD1-212ENST00000585672 KIF3AQ9Y496 699 aa18.39■□□□□ 0.53
MBD1-212ENST00000585672 LRSAM1Q6UWE0 723 aa18.38■□□□□ 0.53
MBD1-212ENST00000585672 BCL2L12Q9HB09 334 aa18.38■□□□□ 0.53
MBD1-212ENST00000585672 PAXIP1Q6ZW49 1069 aaPredicted RBP18.38■□□□□ 0.53
MBD1-212ENST00000585672 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
MBD1-212ENST00000585672 PDCL2Q8N4E4 241 aa18.37■□□□□ 0.53
MBD1-212ENST00000585672 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
MBD1-212ENST00000585672 PTMAP06454 111 aaKnown RBP18.37■□□□□ 0.53
MBD1-212ENST00000585672 RGL3Q3MIN7 710 aa18.37■□□□□ 0.53
MBD1-212ENST00000585672 WDR62O43379 1518 aa18.36■□□□□ 0.53
MBD1-212ENST00000585672 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
MBD1-212ENST00000585672 SYCE3A1L190 88 aa18.35■□□□□ 0.53
MBD1-212ENST00000585672 U2AF2P26368 475 aaKnown RBP eCLIP18.35■□□□□ 0.533e-7■■□□□ 12.2
MBD1-212ENST00000585672 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
MBD1-212ENST00000585672 ZNF771Q7L3S4 317 aaPredicted RBP18.35■□□□□ 0.53
MBD1-212ENST00000585672 RNF214Q8ND24 703 aa18.35■□□□□ 0.53
MBD1-212ENST00000585672 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
MBD1-212ENST00000585672 PIBF1Q8WXW3 757 aa18.34■□□□□ 0.53
MBD1-212ENST00000585672 TMEM63CQ9P1W3 806 aa18.34■□□□□ 0.53
MBD1-212ENST00000585672 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
MBD1-212ENST00000585672 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
MBD1-212ENST00000585672 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
MBD1-212ENST00000585672 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
MBD1-212ENST00000585672 LAMC1P11047 1609 aa18.34■□□□□ 0.53
MBD1-212ENST00000585672 PKP1Q13835 747 aa18.33■□□□□ 0.53
MBD1-212ENST00000585672 KIF16BQ96L93 1317 aa18.33■□□□□ 0.52
MBD1-212ENST00000585672 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
MBD1-212ENST00000585672 CFDP1Q9UEE9 299 aaPredicted RBP18.32■□□□□ 0.52
MBD1-212ENST00000585672 ASXL1Q8IXJ9 1541 aa18.32■□□□□ 0.52
MBD1-212ENST00000585672 C17orf53Q8N3J3 647 aaPredicted RBP18.32■□□□□ 0.52
MBD1-212ENST00000585672 MPNDQ8N594 471 aa18.32■□□□□ 0.52
MBD1-212ENST00000585672 NUCB2P80303 420 aa18.31■□□□□ 0.52
MBD1-212ENST00000585672 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
MBD1-212ENST00000585672 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
MBD1-212ENST00000585672 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
MBD1-212ENST00000585672 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
MBD1-212ENST00000585672 NEUROD2Q15784 382 aa18.31■□□□□ 0.52
MBD1-212ENST00000585672 DNMBPQ6XZF7 1577 aa18.31■□□□□ 0.52
MBD1-212ENST00000585672 ZNF777Q9ULD5 760 aaPredicted RBP18.3■□□□□ 0.52
MBD1-212ENST00000585672 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
MBD1-212ENST00000585672 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
MBD1-212ENST00000585672 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
MBD1-212ENST00000585672 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
MBD1-212ENST00000585672 A2MP01023 1474 aa18.28■□□□□ 0.52
MBD1-212ENST00000585672 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
MBD1-212ENST00000585672 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
MBD1-212ENST00000585672 KCNJ4P48050 445 aa18.28■□□□□ 0.52
MBD1-212ENST00000585672 FKBP5Q13451 457 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms