RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
CDK5RAP3-204ENST00000577664 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-204ENST00000577664 DEFB132Q7Z7B7 95 aa16.07■□□□□ 0.16
CDK5RAP3-204ENST00000577664 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
CDK5RAP3-204ENST00000577664 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
CDK5RAP3-204ENST00000577664 BCANQ96GW7 911 aa16.06■□□□□ 0.16
CDK5RAP3-204ENST00000577664 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-204ENST00000577664 ADAMTS13Q76LX8 1427 aa16.03■□□□□ 0.16
CDK5RAP3-204ENST00000577664 TONSLQ96HA7 1378 aa16.03■□□□□ 0.16
CDK5RAP3-204ENST00000577664 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-204ENST00000577664 LAMC1P11047 1609 aa16.03■□□□□ 0.16
CDK5RAP3-204ENST00000577664 RGL3Q3MIN7 710 aa16.02■□□□□ 0.16
CDK5RAP3-204ENST00000577664 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-204ENST00000577664 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDK5RAP3-204ENST00000577664 NRXN1Q9ULB1 1477 aa16■□□□□ 0.15
CDK5RAP3-204ENST00000577664 DCAF11Q8TEB1 546 aa16■□□□□ 0.15
CDK5RAP3-204ENST00000577664 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-204ENST00000577664 NEXMIFQ5QGS0 1516 aa15.99■□□□□ 0.15
CDK5RAP3-204ENST00000577664 MYOM2P54296 1465 aa15.99■□□□□ 0.15
CDK5RAP3-204ENST00000577664 PSDA5PKW4 1024 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-204ENST00000577664 CHGAP10645 457 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-204ENST00000577664 RIMS2Q9UQ26 1411 aa15.99■□□□□ 0.15
CDK5RAP3-204ENST00000577664 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
CDK5RAP3-204ENST00000577664 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
CDK5RAP3-204ENST00000577664 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-204ENST00000577664 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-204ENST00000577664 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-204ENST00000577664 PPLO60437 1756 aa15.98■□□□□ 0.15
CDK5RAP3-204ENST00000577664 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-204ENST00000577664 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-204ENST00000577664 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
CDK5RAP3-204ENST00000577664 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-204ENST00000577664 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
CDK5RAP3-204ENST00000577664 BRWD3Q6RI45 1802 aa15.94■□□□□ 0.14
CDK5RAP3-204ENST00000577664 GLI3P10071 1580 aa15.94■□□□□ 0.14
CDK5RAP3-204ENST00000577664 PRAG1Q86YV5 1406 aa15.94■□□□□ 0.14
CDK5RAP3-204ENST00000577664 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
CDK5RAP3-204ENST00000577664 XRN1Q8IZH2 1706 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-204ENST00000577664 MARF1Q9Y4F3 1742 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-204ENST00000577664 NBPF8Q3BBV2 869 aa15.92■□□□□ 0.14
CDK5RAP3-204ENST00000577664 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-204ENST00000577664 KDM2AQ9Y2K7 1162 aa15.92■□□□□ 0.14
CDK5RAP3-204ENST00000577664 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
CDK5RAP3-204ENST00000577664 RALGAPBQ86X10 1494 aa15.91■□□□□ 0.14
CDK5RAP3-204ENST00000577664 BAG6P46379 1132 aa15.9■□□□□ 0.14
CDK5RAP3-204ENST00000577664 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
CDK5RAP3-204ENST00000577664 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
CDK5RAP3-204ENST00000577664 C1orf167Q5SNV9 1468 aa15.88■□□□□ 0.13
CDK5RAP3-204ENST00000577664 GPRASP1Q5JY77 1395 aa15.87■□□□□ 0.13
CDK5RAP3-204ENST00000577664 SLIT2O94813 1529 aa15.87■□□□□ 0.13
CDK5RAP3-204ENST00000577664 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
CDK5RAP3-204ENST00000577664 ONECUT3O60422 494 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-204ENST00000577664 R3HDM1Q15032 1099 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-204ENST00000577664 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
CDK5RAP3-204ENST00000577664 NRXN3Q9Y4C0 1643 aa15.84■□□□□ 0.13
CDK5RAP3-204ENST00000577664 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
CDK5RAP3-204ENST00000577664 SEPT12Q8IYM1 358 aa15.84■□□□□ 0.13
CDK5RAP3-204ENST00000577664 NALCNQ8IZF0 1738 aa15.84■□□□□ 0.13
CDK5RAP3-204ENST00000577664 DISP2A7MBM2 1401 aa15.84■□□□□ 0.13
CDK5RAP3-204ENST00000577664 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.13
CDK5RAP3-204ENST00000577664 NBPF1Q3BBV0 1214 aa15.82■□□□□ 0.12
CDK5RAP3-204ENST00000577664 ADGRB1O14514 1584 aa15.81■□□□□ 0.12
CDK5RAP3-204ENST00000577664 KRT27Q7Z3Y8 459 aa15.81■□□□□ 0.12
CDK5RAP3-204ENST00000577664 ZNF784Q8NCA9 323 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-204ENST00000577664 C1QTNF8P60827 252 aa15.8■□□□□ 0.12
CDK5RAP3-204ENST00000577664 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
CDK5RAP3-204ENST00000577664 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-204ENST00000577664 ORAI2Q96SN7 254 aa15.79■□□□□ 0.12
CDK5RAP3-204ENST00000577664 RGPD1P0DJD0 1748 aa15.78■□□□□ 0.12
CDK5RAP3-204ENST00000577664 ROCK2O75116 1388 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-204ENST00000577664 METP08581 1390 aa15.77■□□□□ 0.12
CDK5RAP3-204ENST00000577664 ABCC11Q96J66 1382 aa15.77■□□□□ 0.12
CDK5RAP3-204ENST00000577664 NINLQ9Y2I6 1382 aa15.77■□□□□ 0.12
CDK5RAP3-204ENST00000577664 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
CDK5RAP3-204ENST00000577664 VPS72Q15906 364 aa15.76■□□□□ 0.11
CDK5RAP3-204ENST00000577664 CARD11Q9BXL7 1154 aa15.76■□□□□ 0.11
CDK5RAP3-204ENST00000577664 PXDNQ92626 1479 aa15.76■□□□□ 0.11
CDK5RAP3-204ENST00000577664 TECPR2O15040 1411 aa15.76■□□□□ 0.11
CDK5RAP3-204ENST00000577664 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-204ENST00000577664 UTRNP46939 3433 aa15.75■□□□□ 0.11
CDK5RAP3-204ENST00000577664 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
CDK5RAP3-204ENST00000577664 YTHDC2Q9H6S0 1430 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-204ENST00000577664 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
CDK5RAP3-204ENST00000577664 CEP350Q5VT06 3117 aa15.73■□□□□ 0.11
CDK5RAP3-204ENST00000577664 DLC1Q96QB1 1528 aa15.72■□□□□ 0.11
CDK5RAP3-204ENST00000577664 TNS1Q9HBL0 1735 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-204ENST00000577664 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
CDK5RAP3-204ENST00000577664 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
CDK5RAP3-204ENST00000577664 USP32Q8NFA0 1604 aa15.7■□□□□ 0.1
CDK5RAP3-204ENST00000577664 NWD2Q9ULI1 1742 aa15.7■□□□□ 0.1
CDK5RAP3-204ENST00000577664 CAMKK2Q96RR4 588 aa15.69■□□□□ 0.1
CDK5RAP3-204ENST00000577664 CAMTA1Q9Y6Y1 1673 aa15.69■□□□□ 0.1
CDK5RAP3-204ENST00000577664 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
CDK5RAP3-204ENST00000577664 PARD3Q8TEW0 1356 aa15.68■□□□□ 0.1
CDK5RAP3-204ENST00000577664 USP47Q96K76 1375 aa15.68■□□□□ 0.1
CDK5RAP3-204ENST00000577664 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
CDK5RAP3-204ENST00000577664 EZH2Q15910 746 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-204ENST00000577664 EIF3AQ14152 1382 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-204ENST00000577664 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
CDK5RAP3-204ENST00000577664 HSPA5P11021 654 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms