RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 R3HDM1Q15032 1099 aaKnown RBP11.35□□□□□ -0.59
SMG6-211ENST00000572369 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
SMG6-211ENST00000572369 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
SMG6-211ENST00000572369 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
SMG6-211ENST00000572369 LRRC59Q96AG4 307 aaKnown RBP11.34□□□□□ -0.59
SMG6-211ENST00000572369 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.34□□□□□ -0.59
SMG6-211ENST00000572369 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
SMG6-211ENST00000572369 ASXL1Q8IXJ9 1541 aa11.34□□□□□ -0.59
SMG6-211ENST00000572369 ADAMTS13Q76LX8 1427 aa11.34□□□□□ -0.59
SMG6-211ENST00000572369 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
SMG6-211ENST00000572369 ANKRD30BQ9BXX2 1392 aa11.33□□□□□ -0.6
SMG6-211ENST00000572369 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
SMG6-211ENST00000572369 SPATA31E1Q6ZUB1 1445 aa11.33□□□□□ -0.6
SMG6-211ENST00000572369 UTRNP46939 3433 aa11.32□□□□□ -0.6
SMG6-211ENST00000572369 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
SMG6-211ENST00000572369 CAMTA1Q9Y6Y1 1673 aa11.31□□□□□ -0.6
SMG6-211ENST00000572369 ATF3P18847 181 aa11.31□□□□□ -0.6
SMG6-211ENST00000572369 BAG6P46379 1132 aa11.31□□□□□ -0.6
SMG6-211ENST00000572369 AMOTL2Q9Y2J4 779 aa11.31□□□□□ -0.6
SMG6-211ENST00000572369 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
SMG6-211ENST00000572369 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
SMG6-211ENST00000572369 ADGRF5Q8IZF2 1346 aa11.3□□□□□ -0.6
SMG6-211ENST00000572369 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
SMG6-211ENST00000572369 METP08581 1390 aa11.28□□□□□ -0.6
SMG6-211ENST00000572369 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
SMG6-211ENST00000572369 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
SMG6-211ENST00000572369 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
SMG6-211ENST00000572369 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
SMG6-211ENST00000572369 PTPRUQ92729 1446 aa11.27□□□□□ -0.6
SMG6-211ENST00000572369 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
SMG6-211ENST00000572369 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
SMG6-211ENST00000572369 RALGAPBQ86X10 1494 aa11.26□□□□□ -0.61
SMG6-211ENST00000572369 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
SMG6-211ENST00000572369 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
SMG6-211ENST00000572369 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
SMG6-211ENST00000572369 LAMC1P11047 1609 aa11.26□□□□□ -0.61
SMG6-211ENST00000572369 MYOM2P54296 1465 aa11.25□□□□□ -0.61
SMG6-211ENST00000572369 GLI3P10071 1580 aa11.25□□□□□ -0.61
SMG6-211ENST00000572369 STK26Q9P289 416 aa11.25□□□□□ -0.61
SMG6-211ENST00000572369 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
SMG6-211ENST00000572369 PIK3C2GO75747 1445 aa11.25□□□□□ -0.61
SMG6-211ENST00000572369 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
SMG6-211ENST00000572369 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
SMG6-211ENST00000572369 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
SMG6-211ENST00000572369 SIN3AQ96ST3 1273 aa11.23□□□□□ -0.61
SMG6-211ENST00000572369 CAPN15O75808 1086 aa11.22□□□□□ -0.61
SMG6-211ENST00000572369 DCCP43146 1447 aa11.22□□□□□ -0.61
SMG6-211ENST00000572369 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
SMG6-211ENST00000572369 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
SMG6-211ENST00000572369 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
SMG6-211ENST00000572369 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
SMG6-211ENST00000572369 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.21□□□□□ -0.61
SMG6-211ENST00000572369 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.61
SMG6-211ENST00000572369 DDX17Q92841 729 aaKnown RBP11.21□□□□□ -0.61
SMG6-211ENST00000572369 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.62
SMG6-211ENST00000572369 MST1RQ04912 1400 aa11.2□□□□□ -0.62
SMG6-211ENST00000572369 YTHDC2Q9H6S0 1430 aaKnown RBP11.19□□□□□ -0.62
SMG6-211ENST00000572369 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
SMG6-211ENST00000572369 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
SMG6-211ENST00000572369 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
SMG6-211ENST00000572369 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
SMG6-211ENST00000572369 COL22A1Q8NFW1 1626 aaPredicted RBP11.18□□□□□ -0.62
SMG6-211ENST00000572369 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
SMG6-211ENST00000572369 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
SMG6-211ENST00000572369 CHD4Q14839 1912 aa11.17□□□□□ -0.62
SMG6-211ENST00000572369 KRT27Q7Z3Y8 459 aa11.17□□□□□ -0.62
SMG6-211ENST00000572369 WAPLQ7Z5K2 1190 aa11.17□□□□□ -0.62
SMG6-211ENST00000572369 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
SMG6-211ENST00000572369 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
SMG6-211ENST00000572369 POGKQ9P215 609 aa11.17□□□□□ -0.62
SMG6-211ENST00000572369 MARF1Q9Y4F3 1742 aaKnown RBP11.17□□□□□ -0.62
SMG6-211ENST00000572369 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
SMG6-211ENST00000572369 ABCC11Q96J66 1382 aa11.16□□□□□ -0.62
SMG6-211ENST00000572369 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
SMG6-211ENST00000572369 TRAK1Q9UPV9 953 aa11.16□□□□□ -0.62
SMG6-211ENST00000572369 TECPR2O15040 1411 aa11.16□□□□□ -0.62
SMG6-211ENST00000572369 PRELPP51888 382 aa11.15□□□□□ -0.62
SMG6-211ENST00000572369 SAFB2Q14151 953 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMG6-211ENST00000572369 PRAG1Q86YV5 1406 aa11.15□□□□□ -0.62
SMG6-211ENST00000572369 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
SMG6-211ENST00000572369 ADGRB1O14514 1584 aa11.14□□□□□ -0.63
SMG6-211ENST00000572369 TNS1Q9HBL0 1735 aaKnown RBP11.13□□□□□ -0.63
SMG6-211ENST00000572369 KCNQ2O43526 872 aa11.13□□□□□ -0.63
SMG6-211ENST00000572369 EZH2Q15910 746 aaKnown RBP11.13□□□□□ -0.63
SMG6-211ENST00000572369 UNC5CLQ8IV45 518 aa11.13□□□□□ -0.63
SMG6-211ENST00000572369 PLEKHH1Q9ULM0 1364 aa11.13□□□□□ -0.63
SMG6-211ENST00000572369 CDC42BPGQ6DT37 1551 aa11.12□□□□□ -0.63
SMG6-211ENST00000572369 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
SMG6-211ENST00000572369 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
SMG6-211ENST00000572369 SIRT1Q96EB6 747 aa11.12□□□□□ -0.63
SMG6-211ENST00000572369 DLC1Q96QB1 1528 aa11.12□□□□□ -0.63
SMG6-211ENST00000572369 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
SMG6-211ENST00000572369 SOS2Q07890 1332 aaPredicted RBP11.11□□□□□ -0.63
SMG6-211ENST00000572369 SLIT2O94813 1529 aa11.11□□□□□ -0.63
SMG6-211ENST00000572369 TRPM1Q7Z4N2 1603 aa11.11□□□□□ -0.63
SMG6-211ENST00000572369 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
SMG6-211ENST00000572369 FMN2Q9NZ56 1722 aa11.1□□□□□ -0.63
SMG6-211ENST00000572369 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
SMG6-211ENST00000572369 ESCO1Q5FWF5 840 aa11.1□□□□□ -0.63
SMG6-211ENST00000572369 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms