RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SYNJ2O15056 1496 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.72□□□□□ -1.17
PTPN9-204ENST00000564970 PRDM2Q13029 1718 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 ZNF853P0CG23 659 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 UBTFP17480 764 aaKnown RBP7.72□□□□□ -1.17
PTPN9-204ENST00000564970 CBX1P83916 185 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
PTPN9-204ENST00000564970 MUM1L1Q5H9M0 696 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 CCDC91Q7Z6B0 441 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 PAIP2Q9BPZ3 127 aaKnown RBP7.72□□□□□ -1.17
PTPN9-204ENST00000564970 RASSF4Q9H2L5 321 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 RCAN3Q9UKA8 241 aa7.72□□□□□ -1.17
PTPN9-204ENST00000564970 POLR1AO95602 1720 aaPredicted RBP7.72□□□□□ -1.17
PTPN9-204ENST00000564970 NPC1L1Q9UHC9 1359 aa7.71□□□□□ -1.17
PTPN9-204ENST00000564970 E9PSI1 815 aa7.71□□□□□ -1.18
PTPN9-204ENST00000564970 ZNF445P59923 1031 aa7.71□□□□□ -1.18
PTPN9-204ENST00000564970 OS9Q13438 667 aaPredicted RBP7.71□□□□□ -1.18
PTPN9-204ENST00000564970 FAM43BQ6ZT52 329 aaPredicted RBP7.71□□□□□ -1.18
PTPN9-204ENST00000564970 ANKRD7Q92527 254 aa7.71□□□□□ -1.18
PTPN9-204ENST00000564970 MKL1Q969V6 931 aa7.71□□□□□ -1.18
PTPN9-204ENST00000564970 SIN3AQ96ST3 1273 aa7.71□□□□□ -1.18
PTPN9-204ENST00000564970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTPN9-204ENST00000564970 CWC15Q9P013 229 aaKnown RBP7.71□□□□□ -1.18
PTPN9-204ENST00000564970 FEZ2Q9UHY8 353 aaPredicted RBP7.71□□□□□ -1.18
PTPN9-204ENST00000564970 URB2Q14146 1524 aaKnown RBP7.71□□□□□ -1.18
PTPN9-204ENST00000564970 NCOA1Q15788 1441 aa7.7□□□□□ -1.18
PTPN9-204ENST00000564970 PPP1R12AO14974 1030 aaPredicted RBP7.7□□□□□ -1.18
PTPN9-204ENST00000564970 REC8O95072 547 aa7.7□□□□□ -1.18
PTPN9-204ENST00000564970 TPM3P06753 285 aa7.7□□□□□ -1.18
PTPN9-204ENST00000564970 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
PTPN9-204ENST00000564970 CLEC17AQ6ZS10 378 aa7.7□□□□□ -1.18
PTPN9-204ENST00000564970 CHD1O14646 1710 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 CCDC196A0A1B0GTZ2 297 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 SLFN14P0C7P3 912 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 NOP2P46087 812 aaKnown RBP7.69□□□□□ -1.18
PTPN9-204ENST00000564970 RABEP1Q15276 862 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 TERF2Q15554 542 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 AEBP1Q8IUX7 1158 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 KRT222Q8N1A0 295 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 ITFG2Q969R8 447 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 SH3BP1Q9Y3L3 701 aa7.69□□□□□ -1.18
PTPN9-204ENST00000564970 MORC2Q9Y6X9 1032 aaPredicted RBP7.69□□□□□ -1.18
PTPN9-204ENST00000564970 CLASP1Q7Z460 1538 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 CTTNBP2Q8WZ74 1663 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 SLC4A3P48751 1232 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 TDO2P48775 406 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 TMED8Q6PL24 325 aaPredicted RBP7.68□□□□□ -1.18
PTPN9-204ENST00000564970 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.68□□□□□ -1.18
PTPN9-204ENST00000564970 EXOC6Q8TAG9 804 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 DEF6Q9H4E7 631 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 MRVI1Q9Y6F6 885 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
PTPN9-204ENST00000564970 KIF13AQ9H1H9 1805 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 CTIFO43310 598 aaKnown RBP7.67□□□□□ -1.18
PTPN9-204ENST00000564970 DHX16O60231 1041 aaKnown RBP7.67□□□□□ -1.18
PTPN9-204ENST00000564970 CAPN2P17655 700 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 KLHL40Q2TBA0 621 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 CAVIN1Q6NZI2 390 aaKnown RBP7.67□□□□□ -1.18
PTPN9-204ENST00000564970 FAM9BQ8IZU0 186 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 TXLNBQ8N3L3 684 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTPN9-204ENST00000564970 DDX41Q9UJV9 622 aaKnown RBP7.67□□□□□ -1.18
PTPN9-204ENST00000564970 PAXBP1Q9Y5B6 917 aa7.67□□□□□ -1.18
PTPN9-204ENST00000564970 LRPPRCP42704 1394 aaKnown RBP7.67□□□□□ -1.18
PTPN9-204ENST00000564970 LOC102724159A0A0B4J2E5 919 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 KLHL33A6NCF5 533 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 CTAGE5O15320 804 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 CASQ1P31415 396 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 EIF4G2P78344 907 aaKnown RBP eCLIP7.66□□□□□ -1.18
PTPN9-204ENST00000564970 HDAC1Q13547 482 aaPredicted RBP7.66□□□□□ -1.18
PTPN9-204ENST00000564970 PWP2Q15269 919 aaKnown RBP7.66□□□□□ -1.18
PTPN9-204ENST00000564970 ATP2B3Q16720 1220 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 RNF20Q5VTR2 975 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 JMYQ8N9B5 988 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 KANK1Q14678 1352 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 MIA2Q96PC5 1412 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 NCOA3Q9Y6Q9 1424 aa7.66□□□□□ -1.18
PTPN9-204ENST00000564970 POLA1P09884 1462 aaPredicted RBP7.66□□□□□ -1.18
PTPN9-204ENST00000564970 BRD4O60885 1362 aaPredicted RBP7.65□□□□□ -1.18
PTPN9-204ENST00000564970 ADGRL1O94910 1474 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 ERCC3P19447 782 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 GSCP56915 257 aaPredicted RBP7.65□□□□□ -1.18
PTPN9-204ENST00000564970 GPS2Q13227 327 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 TEX35Q5T0J7 233 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 SUGP1Q8IWZ8 645 aaKnown RBP7.65□□□□□ -1.18
PTPN9-204ENST00000564970 ZNF710Q8N1W2 664 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 TBC1D22AQ8WUA7 517 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 PIBF1Q8WXW3 757 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 SIRT1Q96EB6 747 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 CCDC7Q96M83 1385 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 TBC1D32Q96NH3 1257 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 SPTLC3Q9NUV7 552 aa7.65□□□□□ -1.18
PTPN9-204ENST00000564970 V9GYY5 206 aaPredicted RBP7.65□□□□□ -1.18
PTPN9-204ENST00000564970 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 CCDC18Q5T9S5 1454 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 IFT140Q96RY7 1462 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 A0A1B0GUL7 405 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 IGSF3O75054 1194 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms