RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 STAC3Q96MF2 364 aa15.89■□□□□ 0.13
PCAT1-202ENST00000561978 MYOM2P54296 1465 aa15.89■□□□□ 0.13
PCAT1-202ENST00000561978 ALKQ9UM73 1620 aa15.89■□□□□ 0.13
PCAT1-202ENST00000561978 RBM33Q96EV2 1170 aaKnown RBP15.89■□□□□ 0.13
PCAT1-202ENST00000561978 DIP2AQ14689 1571 aa15.88■□□□□ 0.13
PCAT1-202ENST00000561978 CHD2O14647 1828 aaKnown RBP15.88■□□□□ 0.13
PCAT1-202ENST00000561978 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
PCAT1-202ENST00000561978 KCNA6P17658 529 aa15.87■□□□□ 0.13
PCAT1-202ENST00000561978 CFAP70Q5T0N1 1121 aa15.87■□□□□ 0.13
PCAT1-202ENST00000561978 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
PCAT1-202ENST00000561978 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
PCAT1-202ENST00000561978 PTPRUQ92729 1446 aa15.87■□□□□ 0.13
PCAT1-202ENST00000561978 TRPM1Q7Z4N2 1603 aa15.86■□□□□ 0.13
PCAT1-202ENST00000561978 ST20-MTHFSA0A0A6YYL1 179 aa15.86■□□□□ 0.13
PCAT1-202ENST00000561978 AMOTL2Q9Y2J4 779 aa15.86■□□□□ 0.13
PCAT1-202ENST00000561978 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
PCAT1-202ENST00000561978 GPRASP1Q5JY77 1395 aa15.86■□□□□ 0.13
PCAT1-202ENST00000561978 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
PCAT1-202ENST00000561978 LAMC1P11047 1609 aa15.84■□□□□ 0.13
PCAT1-202ENST00000561978 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
PCAT1-202ENST00000561978 CPS1P31327 1500 aa15.84■□□□□ 0.13
PCAT1-202ENST00000561978 PIK3R4Q99570 1358 aa15.83■□□□□ 0.13
PCAT1-202ENST00000561978 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.12
PCAT1-202ENST00000561978 NWD1Q149M9 1564 aa15.83■□□□□ 0.12
PCAT1-202ENST00000561978 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
PCAT1-202ENST00000561978 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.12
PCAT1-202ENST00000561978 STK26Q9P289 416 aa15.83■□□□□ 0.12
PCAT1-202ENST00000561978 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
PCAT1-202ENST00000561978 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
PCAT1-202ENST00000561978 ASXL1Q8IXJ9 1541 aa15.82■□□□□ 0.12
PCAT1-202ENST00000561978 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
PCAT1-202ENST00000561978 TMEM94Q12767 1356 aa15.81■□□□□ 0.12
PCAT1-202ENST00000561978 XIRP1Q702N8 1843 aaKnown RBP15.8■□□□□ 0.12
PCAT1-202ENST00000561978 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
PCAT1-202ENST00000561978 NKTRP30414 1462 aaKnown RBP15.8■□□□□ 0.12
PCAT1-202ENST00000561978 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
PCAT1-202ENST00000561978 NEFLP07196 543 aa15.8■□□□□ 0.12
PCAT1-202ENST00000561978 NBPF1Q3BBV0 1214 aa15.78■□□□□ 0.12
PCAT1-202ENST00000561978 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.12
PCAT1-202ENST00000561978 ROBO2Q9HCK4 1378 aa15.77■□□□□ 0.12
PCAT1-202ENST00000561978 ADGRB1O14514 1584 aa15.77■□□□□ 0.11
PCAT1-202ENST00000561978 POLA2Q14181 598 aa15.76■□□□□ 0.11
PCAT1-202ENST00000561978 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
PCAT1-202ENST00000561978 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
PCAT1-202ENST00000561978 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
PCAT1-202ENST00000561978 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
PCAT1-202ENST00000561978 TRAK1Q9UPV9 953 aa15.75■□□□□ 0.11
PCAT1-202ENST00000561978 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
PCAT1-202ENST00000561978 RALBP1Q15311 655 aa15.75■□□□□ 0.11
PCAT1-202ENST00000561978 PTCH1Q13635 1447 aa15.73■□□□□ 0.11
PCAT1-202ENST00000561978 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
PCAT1-202ENST00000561978 KIAA1210Q9ULL0 1709 aa15.73■□□□□ 0.11
PCAT1-202ENST00000561978 TMF1P82094 1093 aa15.73■□□□□ 0.11
PCAT1-202ENST00000561978 SAFB2Q14151 953 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCAT1-202ENST00000561978 FKBP8Q14318 412 aa15.73■□□□□ 0.11
PCAT1-202ENST00000561978 PLEKHH1Q9ULM0 1364 aa15.73■□□□□ 0.11
PCAT1-202ENST00000561978 IQSEC2Q5JU85 1478 aa15.72■□□□□ 0.11
PCAT1-202ENST00000561978 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
PCAT1-202ENST00000561978 TECPR2O15040 1411 aa15.72■□□□□ 0.11
PCAT1-202ENST00000561978 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
PCAT1-202ENST00000561978 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.11
PCAT1-202ENST00000561978 MSH6P52701 1360 aa15.71■□□□□ 0.11
PCAT1-202ENST00000561978 PRAM1Q96QH2 718 aa15.71■□□□□ 0.1
PCAT1-202ENST00000561978 TESK2Q96S53 571 aa15.71■□□□□ 0.1
PCAT1-202ENST00000561978 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
PCAT1-202ENST00000561978 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
PCAT1-202ENST00000561978 PIP4K2BP78356 416 aa15.69■□□□□ 0.1
PCAT1-202ENST00000561978 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
PCAT1-202ENST00000561978 TOM1O60784 492 aa15.68■□□□□ 0.1
PCAT1-202ENST00000561978 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
PCAT1-202ENST00000561978 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
PCAT1-202ENST00000561978 POGKQ9P215 609 aa15.68■□□□□ 0.1
PCAT1-202ENST00000561978 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
PCAT1-202ENST00000561978 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
PCAT1-202ENST00000561978 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
PCAT1-202ENST00000561978 ARHGEF28Q8N1W1 1705 aaKnown RBP15.67■□□□□ 0.1
PCAT1-202ENST00000561978 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
PCAT1-202ENST00000561978 FBXO41Q8TF61 875 aa15.66■□□□□ 0.1
PCAT1-202ENST00000561978 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
PCAT1-202ENST00000561978 ATF3P18847 181 aa15.66■□□□□ 0.1
PCAT1-202ENST00000561978 EIF3AQ14152 1382 aaKnown RBP15.65■□□□□ 0.1
PCAT1-202ENST00000561978 DLC1Q96QB1 1528 aa15.65■□□□□ 0.1
PCAT1-202ENST00000561978 PER1O15534 1290 aaPredicted RBP15.64■□□□□ 0.09
PCAT1-202ENST00000561978 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
PCAT1-202ENST00000561978 SIRT1Q96EB6 747 aa15.64■□□□□ 0.09
PCAT1-202ENST00000561978 DISP3Q9P2K9 1392 aa15.64■□□□□ 0.09
PCAT1-202ENST00000561978 NUTM2FA1L443 756 aa15.64■□□□□ 0.09
PCAT1-202ENST00000561978 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
PCAT1-202ENST00000561978 SLAIN2Q9P270 581 aa15.64■□□□□ 0.09
PCAT1-202ENST00000561978 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
PCAT1-202ENST00000561978 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
PCAT1-202ENST00000561978 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
PCAT1-202ENST00000561978 ILDR1Q86SU0 546 aaPredicted RBP15.62■□□□□ 0.09
PCAT1-202ENST00000561978 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
PCAT1-202ENST00000561978 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
PCAT1-202ENST00000561978 DCCP43146 1447 aa15.61■□□□□ 0.09
PCAT1-202ENST00000561978 PANK3Q9H999 370 aa15.6■□□□□ 0.09
PCAT1-202ENST00000561978 CENPJQ9HC77 1338 aaPredicted RBP15.59■□□□□ 0.09
PCAT1-202ENST00000561978 MST1RQ04912 1400 aa15.58■□□□□ 0.09
PCAT1-202ENST00000561978 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms