RNA–Protein interactions for RNA: ENST00000561816.1

LINC01616-201, Transcript of long intergenic non-protein coding RNA 1616, humanhuman

BASIC

Gene LINC01616, Length 2,280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01616-201ENST00000561816 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
LINC01616-201ENST00000561816 CHMP4AQ9BY43 222 aa9.69□□□□□ -0.86
LINC01616-201ENST00000561816 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
LINC01616-201ENST00000561816 GUCA2AQ02747 115 aa9.68□□□□□ -0.86
LINC01616-201ENST00000561816 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
LINC01616-201ENST00000561816 TMEM164Q5U3C3 297 aa9.67□□□□□ -0.86
LINC01616-201ENST00000561816 GNEQ9Y223 722 aaKnown RBP9.67□□□□□ -0.86
LINC01616-201ENST00000561816 ARAP1Q96P48 1450 aa9.67□□□□□ -0.86
LINC01616-201ENST00000561816 ATG7O95352 703 aa9.67□□□□□ -0.86
LINC01616-201ENST00000561816 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
LINC01616-201ENST00000561816 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
LINC01616-201ENST00000561816 TTC13Q8NBP0 860 aa9.66□□□□□ -0.86
LINC01616-201ENST00000561816 NUTM2BA6NNL0 878 aaPredicted RBP9.66□□□□□ -0.86
LINC01616-201ENST00000561816 NUTM2EB1AL46 878 aaPredicted RBP9.66□□□□□ -0.86
LINC01616-201ENST00000561816 ZNF16P17020 682 aaPredicted RBP9.66□□□□□ -0.86
LINC01616-201ENST00000561816 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
LINC01616-201ENST00000561816 NUTM2AQ8IVF1 878 aaPredicted RBP9.66□□□□□ -0.86
LINC01616-201ENST00000561816 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
LINC01616-201ENST00000561816 SOCS7O14512 581 aa9.65□□□□□ -0.86
LINC01616-201ENST00000561816 TAGLNQ01995 201 aaKnown RBP9.65□□□□□ -0.86
LINC01616-201ENST00000561816 IGF1RP08069 1367 aa9.65□□□□□ -0.86
LINC01616-201ENST00000561816 FGD5Q6ZNL6 1462 aa9.65□□□□□ -0.87
LINC01616-201ENST00000561816 PCDHGC3Q9UN70 934 aa9.65□□□□□ -0.87
LINC01616-201ENST00000561816 CUX2O14529 1486 aa9.64□□□□□ -0.87
LINC01616-201ENST00000561816 FANCD2Q9BXW9 1451 aa9.64□□□□□ -0.87
LINC01616-201ENST00000561816 RCCD1A6NED2 376 aa9.64□□□□□ -0.87
LINC01616-201ENST00000561816 PIK3CDO00329 1044 aa9.64□□□□□ -0.87
LINC01616-201ENST00000561816 SERPINB4P48594 390 aa9.63□□□□□ -0.87
LINC01616-201ENST00000561816 EPAS1Q99814 870 aa9.63□□□□□ -0.87
LINC01616-201ENST00000561816 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
LINC01616-201ENST00000561816 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
LINC01616-201ENST00000561816 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
LINC01616-201ENST00000561816 TUSC1Q2TAM9 212 aa9.62□□□□□ -0.87
LINC01616-201ENST00000561816 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
LINC01616-201ENST00000561816 TTBK1Q5TCY1 1321 aaPredicted RBP9.61□□□□□ -0.87
LINC01616-201ENST00000561816 ARHGAP35Q9NRY4 1499 aa9.61□□□□□ -0.87
LINC01616-201ENST00000561816 KANK4Q5T7N3 995 aaPredicted RBP9.61□□□□□ -0.87
LINC01616-201ENST00000561816 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
LINC01616-201ENST00000561816 TSC1Q92574 1164 aa9.61□□□□□ -0.87
LINC01616-201ENST00000561816 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
LINC01616-201ENST00000561816 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
LINC01616-201ENST00000561816 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
LINC01616-201ENST00000561816 GIPC2Q8TF65 315 aa9.59□□□□□ -0.87
LINC01616-201ENST00000561816 CARMIL1Q5VZK9 1371 aa9.59□□□□□ -0.87
LINC01616-201ENST00000561816 WASHC4Q2M389 1173 aa9.59□□□□□ -0.87
LINC01616-201ENST00000561816 LAMC3Q9Y6N6 1575 aa9.59□□□□□ -0.87
LINC01616-201ENST00000561816 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
LINC01616-201ENST00000561816 MAP3K1Q13233 1512 aa9.58□□□□□ -0.88
LINC01616-201ENST00000561816 TOPBP1Q92547 1522 aa9.58□□□□□ -0.88
LINC01616-201ENST00000561816 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
LINC01616-201ENST00000561816 EIF5BO60841 1220 aaKnown RBP9.57□□□□□ -0.88
LINC01616-201ENST00000561816 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
LINC01616-201ENST00000561816 CFAP99D6REC4 459 aa9.57□□□□□ -0.88
LINC01616-201ENST00000561816 EYA1Q99502 592 aa9.57□□□□□ -0.88
LINC01616-201ENST00000561816 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
LINC01616-201ENST00000561816 POLA1P09884 1462 aaPredicted RBP9.56□□□□□ -0.88
LINC01616-201ENST00000561816 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
LINC01616-201ENST00000561816 TCF3P15923 654 aa9.56□□□□□ -0.88
LINC01616-201ENST00000561816 BCL2L13Q9BXK5 485 aa9.56□□□□□ -0.88
LINC01616-201ENST00000561816 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
LINC01616-201ENST00000561816 CHRDL2Q6WN34 429 aa9.56□□□□□ -0.88
LINC01616-201ENST00000561816 DEPDC4Q8N2C3 294 aa9.56□□□□□ -0.88
LINC01616-201ENST00000561816 L3MBTL3Q96JM7 780 aaPredicted RBP9.56□□□□□ -0.88
LINC01616-201ENST00000561816 COLQQ9Y215 455 aaPredicted RBP9.56□□□□□ -0.88
LINC01616-201ENST00000561816 G3V3G9 751 aa9.55□□□□□ -0.88
LINC01616-201ENST00000561816 CRTC2Q53ET0 693 aaPredicted RBP9.54□□□□□ -0.88
LINC01616-201ENST00000561816 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
LINC01616-201ENST00000561816 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
LINC01616-201ENST00000561816 PRSS12P56730 875 aa9.54□□□□□ -0.88
LINC01616-201ENST00000561816 NR6A1Q15406 480 aa9.54□□□□□ -0.88
LINC01616-201ENST00000561816 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
LINC01616-201ENST00000561816 PER1O15534 1290 aaPredicted RBP9.53□□□□□ -0.88
LINC01616-201ENST00000561816 FOSBP53539 338 aa9.53□□□□□ -0.88
LINC01616-201ENST00000561816 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
LINC01616-201ENST00000561816 NESP48681 1621 aa9.53□□□□□ -0.88
LINC01616-201ENST00000561816 HOXA2O43364 376 aa9.53□□□□□ -0.88
LINC01616-201ENST00000561816 ATP9BO43861 1147 aa9.53□□□□□ -0.88
LINC01616-201ENST00000561816 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
LINC01616-201ENST00000561816 ZBTB3Q9H5J0 574 aa9.53□□□□□ -0.88
LINC01616-201ENST00000561816 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.88
LINC01616-201ENST00000561816 COL9A1P20849 921 aa9.52□□□□□ -0.89
LINC01616-201ENST00000561816 SSFA2P28290 1259 aa9.52□□□□□ -0.89
LINC01616-201ENST00000561816 FAM69CQ0P6D2 419 aa9.52□□□□□ -0.89
LINC01616-201ENST00000561816 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
LINC01616-201ENST00000561816 CUL7Q14999 1698 aa9.52□□□□□ -0.89
LINC01616-201ENST00000561816 SMAPO00193 183 aa9.52□□□□□ -0.89
LINC01616-201ENST00000561816 NPAS4Q8IUM7 802 aa9.52□□□□□ -0.89
LINC01616-201ENST00000561816 KDM4AO75164 1064 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 FHAD1B1AJZ9 1412 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 PDS5BQ9NTI5 1447 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 URB2Q14146 1524 aaKnown RBP9.51□□□□□ -0.89
LINC01616-201ENST00000561816 SOWAHDA6NJG2 315 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 SLC34A2O95436 690 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 FDX1P10109 184 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
LINC01616-201ENST00000561816 NUDT18Q6ZVK8 323 aa9.51□□□□□ -0.89
LINC01616-201ENST00000561816 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
LINC01616-201ENST00000561816 KHSRPQ92945 711 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC01616-201ENST00000561816 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms