RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
LINC00520-206ENST00000560336 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
LINC00520-206ENST00000560336 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
LINC00520-206ENST00000560336 IFT140Q96RY7 1462 aa12.35□□□□□ -0.43
LINC00520-206ENST00000560336 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
LINC00520-206ENST00000560336 SULF1Q8IWU6 871 aa12.35□□□□□ -0.43
LINC00520-206ENST00000560336 IGF1RP08069 1367 aa12.34□□□□□ -0.43
LINC00520-206ENST00000560336 EIF4G3O43432 1585 aaKnown RBP12.34□□□□□ -0.43
LINC00520-206ENST00000560336 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
LINC00520-206ENST00000560336 COPS2P61201 443 aa12.33□□□□□ -0.44
LINC00520-206ENST00000560336 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
LINC00520-206ENST00000560336 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
LINC00520-206ENST00000560336 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
LINC00520-206ENST00000560336 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
LINC00520-206ENST00000560336 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
LINC00520-206ENST00000560336 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
LINC00520-206ENST00000560336 CLCN1P35523 988 aa12.3□□□□□ -0.44
LINC00520-206ENST00000560336 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
LINC00520-206ENST00000560336 AK7Q96M32 723 aa12.3□□□□□ -0.44
LINC00520-206ENST00000560336 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
LINC00520-206ENST00000560336 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
LINC00520-206ENST00000560336 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
LINC00520-206ENST00000560336 ADAMTS12P58397 1594 aa12.29□□□□□ -0.44
LINC00520-206ENST00000560336 GCGRP47871 477 aa12.28□□□□□ -0.44
LINC00520-206ENST00000560336 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.44
LINC00520-206ENST00000560336 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.44
LINC00520-206ENST00000560336 TRIM66O15016 1216 aa12.27□□□□□ -0.45
LINC00520-206ENST00000560336 CD46P15529 392 aa12.27□□□□□ -0.45
LINC00520-206ENST00000560336 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
LINC00520-206ENST00000560336 AMHR2Q16671 573 aa12.27□□□□□ -0.45
LINC00520-206ENST00000560336 CLIP1P30622 1438 aa12.27□□□□□ -0.45
LINC00520-206ENST00000560336 A0A0G2JS52 829 aa12.26□□□□□ -0.45
LINC00520-206ENST00000560336 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
LINC00520-206ENST00000560336 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
LINC00520-206ENST00000560336 PUS10Q3MIT2 529 aaKnown RBP12.25□□□□□ -0.45
LINC00520-206ENST00000560336 ZPR1O75312 459 aa12.24□□□□□ -0.45
LINC00520-206ENST00000560336 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
LINC00520-206ENST00000560336 FUT2Q10981 343 aa12.24□□□□□ -0.45
LINC00520-206ENST00000560336 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
LINC00520-206ENST00000560336 SSTR3P32745 418 aaPredicted RBP12.21□□□□□ -0.45
LINC00520-206ENST00000560336 NR1I2O75469 434 aa12.2□□□□□ -0.46
LINC00520-206ENST00000560336 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
LINC00520-206ENST00000560336 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
LINC00520-206ENST00000560336 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
LINC00520-206ENST00000560336 CHD1O14646 1710 aa12.2□□□□□ -0.46
LINC00520-206ENST00000560336 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
LINC00520-206ENST00000560336 TLL1O43897 1013 aa12.19□□□□□ -0.46
LINC00520-206ENST00000560336 MORN1Q5T089 497 aa12.19□□□□□ -0.46
LINC00520-206ENST00000560336 SCUBE3Q8IX30 993 aa12.19□□□□□ -0.46
LINC00520-206ENST00000560336 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
LINC00520-206ENST00000560336 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
LINC00520-206ENST00000560336 KDM4AO75164 1064 aa12.17□□□□□ -0.46
LINC00520-206ENST00000560336 PDE4DQ08499 809 aa12.17□□□□□ -0.46
LINC00520-206ENST00000560336 ARAP1Q96P48 1450 aa12.16□□□□□ -0.46
LINC00520-206ENST00000560336 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
LINC00520-206ENST00000560336 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
LINC00520-206ENST00000560336 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
LINC00520-206ENST00000560336 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
LINC00520-206ENST00000560336 SLC27A5Q9Y2P5 690 aa12.15□□□□□ -0.46
LINC00520-206ENST00000560336 ARHGAP35Q9NRY4 1499 aa12.14□□□□□ -0.47
LINC00520-206ENST00000560336 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
LINC00520-206ENST00000560336 MS4A1P11836 297 aa12.12□□□□□ -0.47
LINC00520-206ENST00000560336 NUTM1Q86Y26 1132 aa12.12□□□□□ -0.47
LINC00520-206ENST00000560336 HLA-CQ95604 372 aa12.12□□□□□ -0.47
LINC00520-206ENST00000560336 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
LINC00520-206ENST00000560336 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
LINC00520-206ENST00000560336 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
LINC00520-206ENST00000560336 ADH1BP00325 375 aa12.11□□□□□ -0.47
LINC00520-206ENST00000560336 USP46P62068 366 aa12.11□□□□□ -0.47
LINC00520-206ENST00000560336 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
LINC00520-206ENST00000560336 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.11□□□□□ -0.47
LINC00520-206ENST00000560336 HOXA2O43364 376 aa12.1□□□□□ -0.47
LINC00520-206ENST00000560336 SPSB2Q99619 263 aa12.1□□□□□ -0.47
LINC00520-206ENST00000560336 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
LINC00520-206ENST00000560336 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
LINC00520-206ENST00000560336 RGS20O76081 388 aa12.08□□□□□ -0.48
LINC00520-206ENST00000560336 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
LINC00520-206ENST00000560336 S1PR4O95977 384 aa12.08□□□□□ -0.48
LINC00520-206ENST00000560336 GGCXP38435 758 aa12.08□□□□□ -0.48
LINC00520-206ENST00000560336 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
LINC00520-206ENST00000560336 CEP170Q5SW79 1584 aa12.08□□□□□ -0.48
LINC00520-206ENST00000560336 CFAP43Q8NDM7 1665 aa12.07□□□□□ -0.48
LINC00520-206ENST00000560336 PCF11O94913 1555 aaKnown RBP12.07□□□□□ -0.48
LINC00520-206ENST00000560336 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
LINC00520-206ENST00000560336 RNF19BQ6ZMZ0 732 aa12.07□□□□□ -0.48
LINC00520-206ENST00000560336 LRRIQ1Q96JM4 1722 aa12.06□□□□□ -0.48
LINC00520-206ENST00000560336 TRIM26Q12899 539 aaPredicted RBP12.06□□□□□ -0.48
LINC00520-206ENST00000560336 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
LINC00520-206ENST00000560336 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
LINC00520-206ENST00000560336 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
LINC00520-206ENST00000560336 SLC6A16Q9GZN6 736 aa12.06□□□□□ -0.48
LINC00520-206ENST00000560336 PCGF6Q9BYE7 350 aa12.05□□□□□ -0.48
LINC00520-206ENST00000560336 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
LINC00520-206ENST00000560336 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
LINC00520-206ENST00000560336 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
LINC00520-206ENST00000560336 PPEF1O14829 653 aaPredicted RBP12.04□□□□□ -0.48
LINC00520-206ENST00000560336 Q3C1V9 767 aa12.04□□□□□ -0.48
LINC00520-206ENST00000560336 KIAA0586Q9BVV6 1533 aa12.03□□□□□ -0.48
LINC00520-206ENST00000560336 FAM160A2Q8N612 972 aaPredicted RBP12.03□□□□□ -0.48
LINC00520-206ENST00000560336 UGGT2Q9NYU1 1516 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms