RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 CLTCL1P53675 1640 aa9.04□□□□□ -0.96
CTDSPL2-204ENST00000558966 TRPM2O94759 1503 aa9.03□□□□□ -0.96
CTDSPL2-204ENST00000558966 PCDHB8Q9UN66 801 aa9.03□□□□□ -0.96
CTDSPL2-204ENST00000558966 PCDHB13Q9Y5F0 798 aa9.03□□□□□ -0.96
CTDSPL2-204ENST00000558966 RIMS2Q9UQ26 1411 aa9.03□□□□□ -0.96
CTDSPL2-204ENST00000558966 FXR2P51116 673 aaKnown RBP eCLIP9.02□□□□□ -0.96
CTDSPL2-204ENST00000558966 TRIM52Q96A61 297 aa9.02□□□□□ -0.96
CTDSPL2-204ENST00000558966 ZNF467Q7Z7K2 595 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-204ENST00000558966 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
CTDSPL2-204ENST00000558966 SETD5Q9C0A6 1442 aa9□□□□□ -0.97
CTDSPL2-204ENST00000558966 PLEKHG1Q9ULL1 1385 aa9□□□□□ -0.97
CTDSPL2-204ENST00000558966 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
CTDSPL2-204ENST00000558966 SLC26A8Q96RN1 970 aa9□□□□□ -0.97
CTDSPL2-204ENST00000558966 KIF1BO60333 1816 aa8.99□□□□□ -0.97
CTDSPL2-204ENST00000558966 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
CTDSPL2-204ENST00000558966 XIRP1Q702N8 1843 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-204ENST00000558966 RAB3GAP2Q9H2M9 1393 aa8.99□□□□□ -0.97
CTDSPL2-204ENST00000558966 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 NUTM2DQ5VT03 806 aaPredicted RBP8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 POTEHQ6S545 545 aa8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 ADAMTS13Q76LX8 1427 aa8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 NEXMIFQ5QGS0 1516 aa8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 PDAP1Q13442 181 aaKnown RBP8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.98□□□□□ -0.97
CTDSPL2-204ENST00000558966 NRXN3Q9Y4C0 1643 aa8.97□□□□□ -0.97
CTDSPL2-204ENST00000558966 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
CTDSPL2-204ENST00000558966 MPHOSPH9Q99550 1183 aa8.97□□□□□ -0.97
CTDSPL2-204ENST00000558966 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.97
CTDSPL2-204ENST00000558966 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.97
CTDSPL2-204ENST00000558966 CHRDL2Q6WN34 429 aa8.96□□□□□ -0.97
CTDSPL2-204ENST00000558966 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.97
CTDSPL2-204ENST00000558966 DIP2AQ14689 1571 aa8.96□□□□□ -0.97
CTDSPL2-204ENST00000558966 NKTRP30414 1462 aaKnown RBP8.96□□□□□ -0.98
CTDSPL2-204ENST00000558966 SETBP1Q9Y6X0 1596 aa8.96□□□□□ -0.98
CTDSPL2-204ENST00000558966 KCNA6P17658 529 aa8.96□□□□□ -0.98
CTDSPL2-204ENST00000558966 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.98
CTDSPL2-204ENST00000558966 ZNF326Q5BKZ1 582 aaKnown RBP8.95□□□□□ -0.98
CTDSPL2-204ENST00000558966 PSEN1P49768 467 aa8.94□□□□□ -0.98
CTDSPL2-204ENST00000558966 NBR1Q14596 966 aa8.94□□□□□ -0.98
CTDSPL2-204ENST00000558966 TBX22Q9Y458 520 aa8.94□□□□□ -0.98
CTDSPL2-204ENST00000558966 PPLO60437 1756 aa8.94□□□□□ -0.98
CTDSPL2-204ENST00000558966 ACIN1Q9UKV3 1341 aaKnown RBP8.94□□□□□ -0.98
CTDSPL2-204ENST00000558966 ZNF579Q8NAF0 562 aaKnown RBP8.94□□□□□ -0.98
CTDSPL2-204ENST00000558966 TMEM94Q12767 1356 aa8.93□□□□□ -0.98
CTDSPL2-204ENST00000558966 CCDC144AA2RUR9 1427 aa8.93□□□□□ -0.98
CTDSPL2-204ENST00000558966 PAK3O75914 559 aaPredicted RBP8.93□□□□□ -0.98
CTDSPL2-204ENST00000558966 SPATA31E1Q6ZUB1 1445 aa8.93□□□□□ -0.98
CTDSPL2-204ENST00000558966 PTPRUQ92729 1446 aa8.93□□□□□ -0.98
CTDSPL2-204ENST00000558966 PIK3R4Q99570 1358 aa8.92□□□□□ -0.98
CTDSPL2-204ENST00000558966 TOM1O60784 492 aa8.92□□□□□ -0.98
CTDSPL2-204ENST00000558966 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
CTDSPL2-204ENST00000558966 SETD1AO15047 1707 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-204ENST00000558966 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-204ENST00000558966 IFT172Q9UG01 1749 aa8.92□□□□□ -0.98
CTDSPL2-204ENST00000558966 MAP3K13O43283 966 aa8.91□□□□□ -0.98
CTDSPL2-204ENST00000558966 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
CTDSPL2-204ENST00000558966 METP08581 1390 aa8.91□□□□□ -0.98
CTDSPL2-204ENST00000558966 PIP4K2BP78356 416 aa8.91□□□□□ -0.98
CTDSPL2-204ENST00000558966 PROSER2Q86WR7 435 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-204ENST00000558966 RPGRIP1LQ68CZ1 1315 aa8.91□□□□□ -0.98
CTDSPL2-204ENST00000558966 HRCP23327 699 aa8.9□□□□□ -0.98
CTDSPL2-204ENST00000558966 KIF12Q96FN5 646 aa8.89□□□□□ -0.99
CTDSPL2-204ENST00000558966 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
CTDSPL2-204ENST00000558966 ANKRD30BQ9BXX2 1392 aa8.88□□□□□ -0.99
CTDSPL2-204ENST00000558966 RGL3Q3MIN7 710 aa8.88□□□□□ -0.99
CTDSPL2-204ENST00000558966 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
CTDSPL2-204ENST00000558966 MFRPQ9BY79 579 aa8.88□□□□□ -0.99
CTDSPL2-204ENST00000558966 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
CTDSPL2-204ENST00000558966 HSPA1LP34931 641 aa8.87□□□□□ -0.99
CTDSPL2-204ENST00000558966 ADGRF5Q8IZF2 1346 aa8.87□□□□□ -0.99
CTDSPL2-204ENST00000558966 MSH6P52701 1360 aa8.87□□□□□ -0.99
CTDSPL2-204ENST00000558966 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.87□□□□□ -0.99
CTDSPL2-204ENST00000558966 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
CTDSPL2-204ENST00000558966 ASXL1Q8IXJ9 1541 aa8.86□□□□□ -0.99
CTDSPL2-204ENST00000558966 ROBO1Q9Y6N7 1651 aa8.86□□□□□ -0.99
CTDSPL2-204ENST00000558966 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 PIK3C2GO75747 1445 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 FAM135BQ49AJ0 1406 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 PRAG1Q86YV5 1406 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 EFCAB3Q8N7B9 438 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 PTCH1Q13635 1447 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 MYOM2P54296 1465 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 NRXN1Q9ULB1 1477 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
CTDSPL2-204ENST00000558966 CD44P16070 742 aaKnown RBP8.84□□□□□ -0.99
CTDSPL2-204ENST00000558966 PHF12Q96QT6 1004 aa8.84□□□□□ -0.99
CTDSPL2-204ENST00000558966 DCCP43146 1447 aa8.83□□□□□ -1
CTDSPL2-204ENST00000558966 ROBO2Q9HCK4 1378 aa8.83□□□□□ -1
CTDSPL2-204ENST00000558966 C14orf37Q86TY3 774 aa8.83□□□□□ -1
CTDSPL2-204ENST00000558966 ADGRL3Q9HAR2 1447 aa8.83□□□□□ -1
CTDSPL2-204ENST00000558966 PPP1R37O75864 691 aa8.83□□□□□ -1
CTDSPL2-204ENST00000558966 C19orf44Q9H6X5 657 aa8.83□□□□□ -1
CTDSPL2-204ENST00000558966 SLAIN2Q9P270 581 aa8.82□□□□□ -1
CTDSPL2-204ENST00000558966 TECPR2O15040 1411 aa8.82□□□□□ -1
CTDSPL2-204ENST00000558966 KNDC1Q76NI1 1749 aa8.82□□□□□ -1
CTDSPL2-204ENST00000558966 LAMC1P11047 1609 aa8.81□□□□□ -1
CTDSPL2-204ENST00000558966 PHF8Q9UPP1 1060 aa8.81□□□□□ -1
CTDSPL2-204ENST00000558966 MST1RQ04912 1400 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms