RNA–Protein interactions for RNA: ENST00000554387.5

RGMA-205, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 2

Gene RGMA, Length 3,172 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-205ENST00000554387 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
RGMA-205ENST00000554387 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
RGMA-205ENST00000554387 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.36
RGMA-205ENST00000554387 IQGAP3Q86VI3 1631 aa17.27■□□□□ 0.36
RGMA-205ENST00000554387 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
RGMA-205ENST00000554387 MORC1Q86VD1 984 aa17.27■□□□□ 0.35
RGMA-205ENST00000554387 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.35
RGMA-205ENST00000554387 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
RGMA-205ENST00000554387 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
RGMA-205ENST00000554387 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
RGMA-205ENST00000554387 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
RGMA-205ENST00000554387 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
RGMA-205ENST00000554387 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
RGMA-205ENST00000554387 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
RGMA-205ENST00000554387 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
RGMA-205ENST00000554387 CFAP70Q5T0N1 1121 aa17.24■□□□□ 0.35
RGMA-205ENST00000554387 CDC42BPBQ9Y5S2 1711 aa17.24■□□□□ 0.35
RGMA-205ENST00000554387 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
RGMA-205ENST00000554387 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
RGMA-205ENST00000554387 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
RGMA-205ENST00000554387 GBP4Q96PP9 640 aa17.22■□□□□ 0.35
RGMA-205ENST00000554387 MYOM1P52179 1685 aa17.22■□□□□ 0.35
RGMA-205ENST00000554387 DDIT3P35638 169 aa17.22■□□□□ 0.35
RGMA-205ENST00000554387 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
RGMA-205ENST00000554387 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
RGMA-205ENST00000554387 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
RGMA-205ENST00000554387 DUOX2Q9NRD8 1548 aa17.2■□□□□ 0.34
RGMA-205ENST00000554387 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
RGMA-205ENST00000554387 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
RGMA-205ENST00000554387 MTHFSP49914 203 aa17.2■□□□□ 0.34
RGMA-205ENST00000554387 HDAC1Q13547 482 aaPredicted RBP17.2■□□□□ 0.34
RGMA-205ENST00000554387 ERVK-7P63135 1459 aa17.19■□□□□ 0.34
RGMA-205ENST00000554387 TPM2P07951 284 aa17.19■□□□□ 0.34
RGMA-205ENST00000554387 SKOR2Q2VWA4 1001 aaPredicted RBP17.19■□□□□ 0.34
RGMA-205ENST00000554387 SMC5Q8IY18 1101 aa17.19■□□□□ 0.34
RGMA-205ENST00000554387 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
RGMA-205ENST00000554387 SNX21Q969T3 373 aa17.19■□□□□ 0.34
RGMA-205ENST00000554387 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
RGMA-205ENST00000554387 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
RGMA-205ENST00000554387 TRIM27P14373 513 aa17.18■□□□□ 0.34
RGMA-205ENST00000554387 KDM5AP29375 1690 aaKnown RBP17.18■□□□□ 0.34
RGMA-205ENST00000554387 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
RGMA-205ENST00000554387 CIZ1Q9ULV3 898 aaPredicted RBP17.18■□□□□ 0.34
RGMA-205ENST00000554387 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
RGMA-205ENST00000554387 DDX19BQ9UMR2 479 aa17.17■□□□□ 0.34
RGMA-205ENST00000554387 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
RGMA-205ENST00000554387 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
RGMA-205ENST00000554387 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
RGMA-205ENST00000554387 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
RGMA-205ENST00000554387 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
RGMA-205ENST00000554387 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
RGMA-205ENST00000554387 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
RGMA-205ENST00000554387 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
RGMA-205ENST00000554387 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
RGMA-205ENST00000554387 PDCL3Q9H2J4 239 aa17.15■□□□□ 0.34
RGMA-205ENST00000554387 NASPP49321 788 aaPredicted RBP17.14■□□□□ 0.33
RGMA-205ENST00000554387 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.33
RGMA-205ENST00000554387 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
RGMA-205ENST00000554387 CCDC173Q0VFZ6 552 aa17.14■□□□□ 0.33
RGMA-205ENST00000554387 ANP32BQ92688 251 aaKnown RBP17.14■□□□□ 0.33
RGMA-205ENST00000554387 IQSEC2Q5JU85 1478 aa17.14■□□□□ 0.33
RGMA-205ENST00000554387 KANK1Q14678 1352 aa17.14■□□□□ 0.33
RGMA-205ENST00000554387 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
RGMA-205ENST00000554387 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
RGMA-205ENST00000554387 PTMSP20962 102 aa17.13■□□□□ 0.33
RGMA-205ENST00000554387 TMEM57Q8N5G2 664 aa17.12■□□□□ 0.33
RGMA-205ENST00000554387 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
RGMA-205ENST00000554387 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
RGMA-205ENST00000554387 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
RGMA-205ENST00000554387 CEP152O94986 1710 aa17.11■□□□□ 0.33
RGMA-205ENST00000554387 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
RGMA-205ENST00000554387 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
RGMA-205ENST00000554387 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
RGMA-205ENST00000554387 NUCB1Q02818 461 aa17.11■□□□□ 0.33
RGMA-205ENST00000554387 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
RGMA-205ENST00000554387 SSFA2P28290 1259 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.33
RGMA-205ENST00000554387 SPHKAPQ2M3C7 1700 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 TRPM2O94759 1503 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 KIF2CQ99661 725 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
RGMA-205ENST00000554387 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
RGMA-205ENST00000554387 PTPRTO14522 1441 aa17.09■□□□□ 0.33
RGMA-205ENST00000554387 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
RGMA-205ENST00000554387 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
RGMA-205ENST00000554387 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
RGMA-205ENST00000554387 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.32
RGMA-205ENST00000554387 SHPRHQ149N8 1683 aa17.08■□□□□ 0.32
RGMA-205ENST00000554387 CHD1O14646 1710 aa17.08■□□□□ 0.32
RGMA-205ENST00000554387 OFD1O75665 1012 aa17.08■□□□□ 0.32
RGMA-205ENST00000554387 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
RGMA-205ENST00000554387 ZNF518AQ6AHZ1 1483 aa17.07■□□□□ 0.32
RGMA-205ENST00000554387 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
RGMA-205ENST00000554387 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
RGMA-205ENST00000554387 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
RGMA-205ENST00000554387 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
RGMA-205ENST00000554387 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms