RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
NPAS3-208ENST00000550662 FDX1P10109 184 aa12.2□□□□□ -0.46
NPAS3-208ENST00000550662 QPCTQ16769 361 aa12.2□□□□□ -0.46
NPAS3-208ENST00000550662 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
NPAS3-208ENST00000550662 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
NPAS3-208ENST00000550662 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
NPAS3-208ENST00000550662 LRCH3Q96II8 777 aa12.2□□□□□ -0.46
NPAS3-208ENST00000550662 SNRKQ9NRH2 765 aa12.2□□□□□ -0.46
NPAS3-208ENST00000550662 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
NPAS3-208ENST00000550662 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
NPAS3-208ENST00000550662 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
NPAS3-208ENST00000550662 PRM3Q9NNZ6 103 aa12.19□□□□□ -0.46
NPAS3-208ENST00000550662 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
NPAS3-208ENST00000550662 NECTIN2Q92692 538 aa12.18□□□□□ -0.46
NPAS3-208ENST00000550662 COG6Q9Y2V7 657 aa12.18□□□□□ -0.46
NPAS3-208ENST00000550662 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
NPAS3-208ENST00000550662 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
NPAS3-208ENST00000550662 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-208ENST00000550662 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
NPAS3-208ENST00000550662 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
NPAS3-208ENST00000550662 AP1G2O75843 785 aa12.15□□□□□ -0.46
NPAS3-208ENST00000550662 HRCP23327 699 aa12.15□□□□□ -0.46
NPAS3-208ENST00000550662 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
NPAS3-208ENST00000550662 MTMR14Q8NCE2 650 aa12.14□□□□□ -0.47
NPAS3-208ENST00000550662 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
NPAS3-208ENST00000550662 CFHP08603 1231 aa12.13□□□□□ -0.47
NPAS3-208ENST00000550662 KCNC4Q03721 635 aa12.13□□□□□ -0.47
NPAS3-208ENST00000550662 MTMR2Q13614 643 aa12.12□□□□□ -0.47
NPAS3-208ENST00000550662 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
NPAS3-208ENST00000550662 ARID3AQ99856 593 aa12.12□□□□□ -0.47
NPAS3-208ENST00000550662 PCDHGC3Q9UN70 934 aa12.12□□□□□ -0.47
NPAS3-208ENST00000550662 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
NPAS3-208ENST00000550662 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
NPAS3-208ENST00000550662 PPP4CP60510 307 aa12.11□□□□□ -0.47
NPAS3-208ENST00000550662 FUT2Q10981 343 aa12.1□□□□□ -0.47
NPAS3-208ENST00000550662 RNF40O75150 1001 aa12.09□□□□□ -0.47
NPAS3-208ENST00000550662 HELBQ8NG08 1087 aaPredicted RBP12.09□□□□□ -0.47
NPAS3-208ENST00000550662 GUCA2AQ02747 115 aa12.08□□□□□ -0.48
NPAS3-208ENST00000550662 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
NPAS3-208ENST00000550662 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
NPAS3-208ENST00000550662 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
NPAS3-208ENST00000550662 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
NPAS3-208ENST00000550662 HLA-CQ95604 372 aa12.07□□□□□ -0.48
NPAS3-208ENST00000550662 GDPD2Q9HCC8 539 aa12.07□□□□□ -0.48
NPAS3-208ENST00000550662 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
NPAS3-208ENST00000550662 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
NPAS3-208ENST00000550662 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
NPAS3-208ENST00000550662 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
NPAS3-208ENST00000550662 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
NPAS3-208ENST00000550662 CCDC97Q96F63 343 aaPredicted RBP12.03□□□□□ -0.48
NPAS3-208ENST00000550662 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
NPAS3-208ENST00000550662 ABL2P42684 1182 aa12.02□□□□□ -0.49
NPAS3-208ENST00000550662 Q3C1V9 767 aa12.02□□□□□ -0.49
NPAS3-208ENST00000550662 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
NPAS3-208ENST00000550662 CTDSPL2Q05D32 466 aa12.01□□□□□ -0.49
NPAS3-208ENST00000550662 MORN1Q5T089 497 aa12□□□□□ -0.49
NPAS3-208ENST00000550662 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
NPAS3-208ENST00000550662 CFAP99D6REC4 459 aa11.99□□□□□ -0.49
NPAS3-208ENST00000550662 RETREG3Q86VR2 466 aa11.99□□□□□ -0.49
NPAS3-208ENST00000550662 TSC1Q92574 1164 aa11.99□□□□□ -0.49
NPAS3-208ENST00000550662 PRR7Q8TB68 274 aa11.98□□□□□ -0.49
NPAS3-208ENST00000550662 MTRQ99707 1265 aa11.98□□□□□ -0.49
NPAS3-208ENST00000550662 APLP1P51693 650 aa11.97□□□□□ -0.49
NPAS3-208ENST00000550662 WASHC4Q2M389 1173 aa11.96□□□□□ -0.49
NPAS3-208ENST00000550662 DESI1Q6ICB0 168 aa11.96□□□□□ -0.49
NPAS3-208ENST00000550662 SLC27A5Q9Y2P5 690 aa11.96□□□□□ -0.49
NPAS3-208ENST00000550662 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
NPAS3-208ENST00000550662 IL21Q9HBE4 155 aa11.95□□□□□ -0.5
NPAS3-208ENST00000550662 HMX1Q9NP08 348 aaPredicted RBP11.95□□□□□ -0.5
NPAS3-208ENST00000550662 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
NPAS3-208ENST00000550662 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
NPAS3-208ENST00000550662 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
NPAS3-208ENST00000550662 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
NPAS3-208ENST00000550662 PUS10Q3MIT2 529 aaKnown RBP11.93□□□□□ -0.5
NPAS3-208ENST00000550662 CALR3Q96L12 384 aaKnown RBP11.92□□□□□ -0.5
NPAS3-208ENST00000550662 IRF5Q13568 498 aa11.91□□□□□ -0.5
NPAS3-208ENST00000550662 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
NPAS3-208ENST00000550662 NR1I2O75469 434 aa11.9□□□□□ -0.5
NPAS3-208ENST00000550662 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
NPAS3-208ENST00000550662 GLMNQ92990 594 aa11.89□□□□□ -0.51
NPAS3-208ENST00000550662 USB1Q9BQ65 265 aaKnown RBP11.89□□□□□ -0.51
NPAS3-208ENST00000550662 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
NPAS3-208ENST00000550662 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
NPAS3-208ENST00000550662 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
NPAS3-208ENST00000550662 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-208ENST00000550662 LYPD8Q6UX82 237 aa11.87□□□□□ -0.51
NPAS3-208ENST00000550662 NKX2-3Q8TAU0 364 aa11.87□□□□□ -0.51
NPAS3-208ENST00000550662 GPR37L1O60883 481 aa11.86□□□□□ -0.51
NPAS3-208ENST00000550662 BLOC1S3Q6QNY0 202 aa11.86□□□□□ -0.51
NPAS3-208ENST00000550662 RNF19BQ6ZMZ0 732 aa11.86□□□□□ -0.51
NPAS3-208ENST00000550662 SCUBE3Q8IX30 993 aa11.86□□□□□ -0.51
NPAS3-208ENST00000550662 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-208ENST00000550662 NR6A1Q15406 480 aa11.85□□□□□ -0.51
NPAS3-208ENST00000550662 SOX11P35716 441 aa11.84□□□□□ -0.51
NPAS3-208ENST00000550662 COPS2P61201 443 aa11.84□□□□□ -0.51
NPAS3-208ENST00000550662 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
NPAS3-208ENST00000550662 EPS8L1Q8TE68 723 aa11.83□□□□□ -0.52
NPAS3-208ENST00000550662 THAP11Q96EK4 314 aa11.83□□□□□ -0.52
NPAS3-208ENST00000550662 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
NPAS3-208ENST00000550662 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms