RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
PRDM4-206ENST00000550659 POM121CA8CG34 1229 aa9.74□□□□□ -0.85
PRDM4-206ENST00000550659 SLC10A3P09131 477 aa9.74□□□□□ -0.85
PRDM4-206ENST00000550659 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
PRDM4-206ENST00000550659 PCDHGC3Q9UN70 934 aa9.74□□□□□ -0.85
PRDM4-206ENST00000550659 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
PRDM4-206ENST00000550659 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
PRDM4-206ENST00000550659 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
PRDM4-206ENST00000550659 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
PRDM4-206ENST00000550659 IRF5Q13568 498 aa9.71□□□□□ -0.86
PRDM4-206ENST00000550659 MTMR2Q13614 643 aa9.71□□□□□ -0.86
PRDM4-206ENST00000550659 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
PRDM4-206ENST00000550659 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
PRDM4-206ENST00000550659 NESP48681 1621 aa9.71□□□□□ -0.86
PRDM4-206ENST00000550659 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
PRDM4-206ENST00000550659 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
PRDM4-206ENST00000550659 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
PRDM4-206ENST00000550659 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
PRDM4-206ENST00000550659 HDGFP51858 240 aaKnown RBP9.69□□□□□ -0.86
PRDM4-206ENST00000550659 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
PRDM4-206ENST00000550659 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
PRDM4-206ENST00000550659 HLA-CQ95604 372 aa9.69□□□□□ -0.86
PRDM4-206ENST00000550659 HMX1Q9NP08 348 aaPredicted RBP9.69□□□□□ -0.86
PRDM4-206ENST00000550659 GPR37L1O60883 481 aa9.68□□□□□ -0.86
PRDM4-206ENST00000550659 PDE4CQ08493 712 aa9.68□□□□□ -0.86
PRDM4-206ENST00000550659 ACIN1Q9UKV3 1341 aaKnown RBP9.67□□□□□ -0.86
PRDM4-206ENST00000550659 PSEN2P49810 448 aa9.67□□□□□ -0.86
PRDM4-206ENST00000550659 FAM98CQ17RN3 349 aaKnown RBP9.67□□□□□ -0.86
PRDM4-206ENST00000550659 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
PRDM4-206ENST00000550659 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
PRDM4-206ENST00000550659 HDGFL1Q5TGJ6 251 aa9.66□□□□□ -0.86
PRDM4-206ENST00000550659 ADAMTS19Q8TE59 1207 aa9.66□□□□□ -0.86
PRDM4-206ENST00000550659 SEPT9Q9UHD8 586 aaPredicted RBP9.66□□□□□ -0.86
PRDM4-206ENST00000550659 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
PRDM4-206ENST00000550659 FUT2Q10981 343 aa9.65□□□□□ -0.86
PRDM4-206ENST00000550659 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
PRDM4-206ENST00000550659 C6orf229H3BNL8 230 aa9.64□□□□□ -0.87
PRDM4-206ENST00000550659 NPM2Q86SE8 214 aaKnown RBP9.64□□□□□ -0.87
PRDM4-206ENST00000550659 LRRN4Q8WUT4 740 aa9.64□□□□□ -0.87
PRDM4-206ENST00000550659 CFHP08603 1231 aa9.63□□□□□ -0.87
PRDM4-206ENST00000550659 LAPTM4BQ86VI4 370 aa9.63□□□□□ -0.87
PRDM4-206ENST00000550659 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
PRDM4-206ENST00000550659 TSC1Q92574 1164 aa9.63□□□□□ -0.87
PRDM4-206ENST00000550659 CFTRP13569 1480 aa9.62□□□□□ -0.87
PRDM4-206ENST00000550659 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
PRDM4-206ENST00000550659 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
PRDM4-206ENST00000550659 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
PRDM4-206ENST00000550659 SOX11P35716 441 aa9.61□□□□□ -0.87
PRDM4-206ENST00000550659 PBX2P40425 430 aa9.61□□□□□ -0.87
PRDM4-206ENST00000550659 VAC14Q08AM6 782 aa9.61□□□□□ -0.87
PRDM4-206ENST00000550659 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
PRDM4-206ENST00000550659 ALG2Q9H553 416 aa9.61□□□□□ -0.87
PRDM4-206ENST00000550659 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
PRDM4-206ENST00000550659 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
PRDM4-206ENST00000550659 PPP1R12CQ9BZL4 782 aa9.6□□□□□ -0.87
PRDM4-206ENST00000550659 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
PRDM4-206ENST00000550659 LAMC3Q9Y6N6 1575 aa9.59□□□□□ -0.87
PRDM4-206ENST00000550659 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
PRDM4-206ENST00000550659 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
PRDM4-206ENST00000550659 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
PRDM4-206ENST00000550659 ERBB3P21860 1342 aa9.58□□□□□ -0.88
PRDM4-206ENST00000550659 SRPK2P78362 688 aaKnown RBP9.58□□□□□ -0.88
PRDM4-206ENST00000550659 VARS2Q5ST30 1063 aaKnown RBP9.58□□□□□ -0.88
PRDM4-206ENST00000550659 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
PRDM4-206ENST00000550659 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
PRDM4-206ENST00000550659 NBPF3Q9H094 633 aa9.58□□□□□ -0.88
PRDM4-206ENST00000550659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
PRDM4-206ENST00000550659 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
PRDM4-206ENST00000550659 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
PRDM4-206ENST00000550659 KIF21AQ7Z4S6 1674 aa9.57□□□□□ -0.88
PRDM4-206ENST00000550659 PATL2C9JE40 543 aaKnown RBP9.56□□□□□ -0.88
PRDM4-206ENST00000550659 RFX1P22670 979 aa9.56□□□□□ -0.88
PRDM4-206ENST00000550659 NR6A1Q15406 480 aa9.56□□□□□ -0.88
PRDM4-206ENST00000550659 MORN1Q5T089 497 aa9.56□□□□□ -0.88
PRDM4-206ENST00000550659 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
PRDM4-206ENST00000550659 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
PRDM4-206ENST00000550659 PALM3A6NDB9 673 aaPredicted RBP9.55□□□□□ -0.88
PRDM4-206ENST00000550659 BHMG1C9JSJ3 638 aaPredicted RBP9.55□□□□□ -0.88
PRDM4-206ENST00000550659 Q3C1V9 767 aa9.55□□□□□ -0.88
PRDM4-206ENST00000550659 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
PRDM4-206ENST00000550659 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
PRDM4-206ENST00000550659 RNF40O75150 1001 aa9.54□□□□□ -0.88
PRDM4-206ENST00000550659 CSB-PGBD3P0DP91 1061 aa9.54□□□□□ -0.88
PRDM4-206ENST00000550659 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
PRDM4-206ENST00000550659 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
PRDM4-206ENST00000550659 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
PRDM4-206ENST00000550659 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
PRDM4-206ENST00000550659 BRD1O95696 1058 aa9.52□□□□□ -0.89
PRDM4-206ENST00000550659 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
PRDM4-206ENST00000550659 ZNF687Q8N1G0 1237 aa9.52□□□□□ -0.89
PRDM4-206ENST00000550659 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
PRDM4-206ENST00000550659 SLC27A5Q9Y2P5 690 aa9.52□□□□□ -0.89
PRDM4-206ENST00000550659 TK2O00142 265 aa9.51□□□□□ -0.89
PRDM4-206ENST00000550659 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
PRDM4-206ENST00000550659 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
PRDM4-206ENST00000550659 LYPD8Q6UX82 237 aa9.51□□□□□ -0.89
PRDM4-206ENST00000550659 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
PRDM4-206ENST00000550659 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
PRDM4-206ENST00000550659 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
PRDM4-206ENST00000550659 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms