RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
RBFOX1-208ENST00000547372 CUL7Q14999 1698 aa14.78□□□□□ -0.04
RBFOX1-208ENST00000547372 U2AF2P26368 475 aaKnown RBP eCLIP14.77□□□□□ -0.04
RBFOX1-208ENST00000547372 TRMT2AQ8IZ69 625 aaKnown RBP14.77□□□□□ -0.04
RBFOX1-208ENST00000547372 PRPF40AO75400 957 aaKnown RBP14.77□□□□□ -0.05
RBFOX1-208ENST00000547372 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
RBFOX1-208ENST00000547372 DISP3Q9P2K9 1392 aa14.77□□□□□ -0.05
RBFOX1-208ENST00000547372 ZSCAN23Q3MJ62 389 aa14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 CHGAP10645 457 aaKnown RBP14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 PDCL2Q8N4E4 241 aa14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 KIAA2012Q0VF49 1180 aa14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 RAB3GAP1Q15042 981 aa14.76□□□□□ -0.05
RBFOX1-208ENST00000547372 DNMT1P26358 1616 aaKnown RBP14.75□□□□□ -0.05
RBFOX1-208ENST00000547372 CCDC39Q9UFE4 941 aa14.75□□□□□ -0.05
RBFOX1-208ENST00000547372 KIAA0586Q9BVV6 1533 aa14.75□□□□□ -0.05
RBFOX1-208ENST00000547372 SYCE3A1L190 88 aa14.75□□□□□ -0.05
RBFOX1-208ENST00000547372 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-208ENST00000547372 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-208ENST00000547372 ZBTB9Q96C00 473 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 CHAMP1Q96JM3 812 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 ARHGEF12Q9NZN5 1544 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 BAG4O95429 457 aaKnown RBP14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 PTMSP20962 102 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 KIF3AQ9Y496 699 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 RLBP1P12271 317 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 KLHL40Q2TBA0 621 aa14.74□□□□□ -0.05
RBFOX1-208ENST00000547372 ZNF710Q8N1W2 664 aa14.73□□□□□ -0.05
RBFOX1-208ENST00000547372 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
RBFOX1-208ENST00000547372 NESP48681 1621 aa14.73□□□□□ -0.05
RBFOX1-208ENST00000547372 CD2BP2O95400 341 aaKnown RBP14.72□□□□□ -0.05
RBFOX1-208ENST00000547372 ERICH4A6NGS2 130 aa14.72□□□□□ -0.05
RBFOX1-208ENST00000547372 MYRIPQ8NFW9 859 aa14.72□□□□□ -0.05
RBFOX1-208ENST00000547372 CAMSAP2Q08AD1 1489 aa14.72□□□□□ -0.05
RBFOX1-208ENST00000547372 KIF21AQ7Z4S6 1674 aa14.72□□□□□ -0.05
RBFOX1-208ENST00000547372 ITPRIPQ8IWB1 547 aa14.72□□□□□ -0.05
RBFOX1-208ENST00000547372 TESK2Q96S53 571 aa14.71□□□□□ -0.05
RBFOX1-208ENST00000547372 NINLQ9Y2I6 1382 aa14.71□□□□□ -0.05
RBFOX1-208ENST00000547372 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.05
RBFOX1-208ENST00000547372 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.06
RBFOX1-208ENST00000547372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.71□□□□□ -0.06
RBFOX1-208ENST00000547372 GAS2L2Q8NHY3 880 aa14.71□□□□□ -0.06
RBFOX1-208ENST00000547372 ZFP91Q96JP5 570 aaPredicted RBP14.71□□□□□ -0.06
RBFOX1-208ENST00000547372 COL17A1Q9UMD9 1497 aaPredicted RBP14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 ANKRD30AQ9BXX3 1397 aa14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 HS1BP3Q53T59 392 aa14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 TTC12Q9H892 705 aaPredicted RBP14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 ANKRD50Q9ULJ7 1429 aa14.7□□□□□ -0.06
RBFOX1-208ENST00000547372 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
RBFOX1-208ENST00000547372 ERBINQ96RT1 1412 aa14.69□□□□□ -0.06
RBFOX1-208ENST00000547372 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
RBFOX1-208ENST00000547372 DDIT3P35638 169 aa14.69□□□□□ -0.06
RBFOX1-208ENST00000547372 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
RBFOX1-208ENST00000547372 BCL2L12Q9HB09 334 aa14.68□□□□□ -0.06
RBFOX1-208ENST00000547372 RTEL1-TNFRSF6BF6WH68 1400 aa14.68□□□□□ -0.06
RBFOX1-208ENST00000547372 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
RBFOX1-208ENST00000547372 K7ELQ4 463 aaPredicted RBP14.67□□□□□ -0.06
RBFOX1-208ENST00000547372 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
RBFOX1-208ENST00000547372 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
RBFOX1-208ENST00000547372 HMGN5P82970 282 aaKnown RBP14.67□□□□□ -0.06
RBFOX1-208ENST00000547372 PKP1Q13835 747 aa14.67□□□□□ -0.06
RBFOX1-208ENST00000547372 NOLC1Q14978 699 aaKnown RBP eCLIP14.66□□□□□ -0.06
RBFOX1-208ENST00000547372 FANCD2Q9BXW9 1451 aa14.66□□□□□ -0.06
RBFOX1-208ENST00000547372 HNRNPMP52272 730 aaKnown RBP eCLIP14.66□□□□□ -0.06
RBFOX1-208ENST00000547372 CHAF1AQ13111 956 aaPredicted RBP14.66□□□□□ -0.06
RBFOX1-208ENST00000547372 APBB1O00213 710 aa14.65□□□□□ -0.06
RBFOX1-208ENST00000547372 TAF3Q5VWG9 929 aa14.65□□□□□ -0.06
RBFOX1-208ENST00000547372 SNX21Q969T3 373 aa14.65□□□□□ -0.06
RBFOX1-208ENST00000547372 PRAG1Q86YV5 1406 aa14.65□□□□□ -0.06
RBFOX1-208ENST00000547372 SMC4Q9NTJ3 1288 aa14.65□□□□□ -0.06
RBFOX1-208ENST00000547372 RARSP54136 660 aaKnown RBP14.65□□□□□ -0.06
RBFOX1-208ENST00000547372 NCOA3Q9Y6Q9 1424 aa14.64□□□□□ -0.07
RBFOX1-208ENST00000547372 MCM5P33992 734 aa14.64□□□□□ -0.07
RBFOX1-208ENST00000547372 ZNF445P59923 1031 aa14.64□□□□□ -0.07
RBFOX1-208ENST00000547372 PDLIM2Q96JY6 352 aa14.63□□□□□ -0.07
RBFOX1-208ENST00000547372 TRIM6-TRIM34B2RNG4 842 aa14.63□□□□□ -0.07
RBFOX1-208ENST00000547372 TNNT3P45378 269 aaPredicted RBP14.63□□□□□ -0.07
RBFOX1-208ENST00000547372 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
RBFOX1-208ENST00000547372 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
RBFOX1-208ENST00000547372 U2AF1L5P0DN76 240 aaPredicted RBP14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 U2AF1Q01081 240 aaKnown RBP eCLIP14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 CLASP1Q7Z460 1538 aa14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 PRIMPOLQ96LW4 560 aa14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
RBFOX1-208ENST00000547372 USP25Q9UHP3 1055 aa14.61□□□□□ -0.07
RBFOX1-208ENST00000547372 RBM25P49756 843 aaKnown RBP14.61□□□□□ -0.07
RBFOX1-208ENST00000547372 LMBRD1Q9NUN5 540 aa14.61□□□□□ -0.07
RBFOX1-208ENST00000547372 TMEM63CQ9P1W3 806 aa14.61□□□□□ -0.07
RBFOX1-208ENST00000547372 NSFL1CQ9UNZ2 370 aaKnown RBP14.61□□□□□ -0.07
RBFOX1-208ENST00000547372 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
RBFOX1-208ENST00000547372 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
RBFOX1-208ENST00000547372 GPT2Q8TD30 523 aa14.6□□□□□ -0.07
RBFOX1-208ENST00000547372 CFAP53Q96M91 514 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms