RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
SCARB1-205ENST00000538291 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
SCARB1-205ENST00000538291 FYB1O15117 783 aa20.36■□□□□ 0.85
SCARB1-205ENST00000538291 GPS2Q13227 327 aa20.36■□□□□ 0.85
SCARB1-205ENST00000538291 ABTB2Q8N961 1025 aa20.35■□□□□ 0.85
SCARB1-205ENST00000538291 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
SCARB1-205ENST00000538291 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
SCARB1-205ENST00000538291 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
SCARB1-205ENST00000538291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.35■□□□□ 0.85
SCARB1-205ENST00000538291 BRMS1Q9HCU9 246 aa20.34■□□□□ 0.85
SCARB1-205ENST00000538291 AAMPQ13685 434 aa20.34■□□□□ 0.85
SCARB1-205ENST00000538291 ESCO1Q5FWF5 840 aa20.34■□□□□ 0.85
SCARB1-205ENST00000538291 ZNF644Q9H582 1327 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-205ENST00000538291 PLEKHO1Q53GL0 409 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-205ENST00000538291 CCDC73Q6ZRK6 1079 aa20.34■□□□□ 0.85
SCARB1-205ENST00000538291 TXNDC2Q86VQ3 553 aa20.34■□□□□ 0.85
SCARB1-205ENST00000538291 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
SCARB1-205ENST00000538291 R3HCC1Q9Y3T6 440 aaKnown RBP20.33■□□□□ 0.85
SCARB1-205ENST00000538291 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
SCARB1-205ENST00000538291 TBC1D2BQ9UPU7 963 aa20.33■□□□□ 0.84
SCARB1-205ENST00000538291 XBP1P17861 261 aa20.33■□□□□ 0.84
SCARB1-205ENST00000538291 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
SCARB1-205ENST00000538291 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
SCARB1-205ENST00000538291 CHMP5Q9NZZ3 219 aa20.32■□□□□ 0.84
SCARB1-205ENST00000538291 IGF1RP08069 1367 aa20.32■□□□□ 0.84
SCARB1-205ENST00000538291 KIF6Q6ZMV9 814 aa20.31■□□□□ 0.84
SCARB1-205ENST00000538291 NUCB2P80303 420 aa20.31■□□□□ 0.84
SCARB1-205ENST00000538291 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
SCARB1-205ENST00000538291 GNAI3P08754 354 aa20.31■□□□□ 0.84
SCARB1-205ENST00000538291 SASS6Q6UVJ0 657 aa20.31■□□□□ 0.84
SCARB1-205ENST00000538291 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
SCARB1-205ENST00000538291 CLASRPQ8N2M8 674 aaKnown RBP20.3■□□□□ 0.84
SCARB1-205ENST00000538291 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
SCARB1-205ENST00000538291 CUX1P39880 1505 aa20.3■□□□□ 0.84
SCARB1-205ENST00000538291 ZNF592Q92610 1267 aa20.3■□□□□ 0.84
SCARB1-205ENST00000538291 IKQ13123 557 aaPredicted RBP20.3■□□□□ 0.84
SCARB1-205ENST00000538291 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
SCARB1-205ENST00000538291 FOSBP53539 338 aa20.29■□□□□ 0.84
SCARB1-205ENST00000538291 SART3Q15020 963 aaKnown RBP20.29■□□□□ 0.84
SCARB1-205ENST00000538291 FSD1Q9BTV5 496 aa20.29■□□□□ 0.84
SCARB1-205ENST00000538291 FAM177BA6PVY3 158 aa20.28■□□□□ 0.84
SCARB1-205ENST00000538291 PSMA5P28066 241 aa20.28■□□□□ 0.84
SCARB1-205ENST00000538291 HOMER1Q86YM7 354 aa20.28■□□□□ 0.84
SCARB1-205ENST00000538291 CT47A1Q5JQC4 288 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-205ENST00000538291 CNTROBQ8N137 903 aa20.28■□□□□ 0.84
SCARB1-205ENST00000538291 MTHFSP49914 203 aa20.28■□□□□ 0.84
SCARB1-205ENST00000538291 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
SCARB1-205ENST00000538291 CDC45O75419 566 aa20.27■□□□□ 0.84
SCARB1-205ENST00000538291 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
SCARB1-205ENST00000538291 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
SCARB1-205ENST00000538291 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
SCARB1-205ENST00000538291 CCDC7Q96M83 1385 aa20.27■□□□□ 0.83
SCARB1-205ENST00000538291 AFAP1Q8N556 730 aa20.27■□□□□ 0.83
SCARB1-205ENST00000538291 STRN4Q9NRL3 753 aa20.27■□□□□ 0.83
SCARB1-205ENST00000538291 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
SCARB1-205ENST00000538291 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
SCARB1-205ENST00000538291 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
SCARB1-205ENST00000538291 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
SCARB1-205ENST00000538291 THEMISQ8N1K5 641 aaPredicted RBP20.25■□□□□ 0.83
SCARB1-205ENST00000538291 GSE1Q14687 1217 aa20.25■□□□□ 0.83
SCARB1-205ENST00000538291 ODF2Q5BJF6 829 aa20.25■□□□□ 0.83
SCARB1-205ENST00000538291 SLC3A2P08195 630 aaKnown RBP20.25■□□□□ 0.83
SCARB1-205ENST00000538291 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
SCARB1-205ENST00000538291 SETQ01105 290 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-205ENST00000538291 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
SCARB1-205ENST00000538291 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
SCARB1-205ENST00000538291 PANK1Q8TE04 598 aa20.23■□□□□ 0.83
SCARB1-205ENST00000538291 C22orf23Q9BZE7 217 aa20.23■□□□□ 0.83
SCARB1-205ENST00000538291 NAP1L1P55209 391 aaKnown RBP20.23■□□□□ 0.83
SCARB1-205ENST00000538291 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.837e-7■■■■■ 33.9
SCARB1-205ENST00000538291 OFD1O75665 1012 aa20.22■□□□□ 0.83
SCARB1-205ENST00000538291 EPS15P42566 896 aa20.22■□□□□ 0.83
SCARB1-205ENST00000538291 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.22■□□□□ 0.83
SCARB1-205ENST00000538291 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
SCARB1-205ENST00000538291 OLFM4Q6UX06 510 aa20.22■□□□□ 0.83
SCARB1-205ENST00000538291 TCP11L2Q8N4U5 519 aa20.22■□□□□ 0.83
SCARB1-205ENST00000538291 DNAJC2Q99543 621 aaKnown RBP20.22■□□□□ 0.83
SCARB1-205ENST00000538291 GNL3LQ9NVN8 582 aaKnown RBP20.22■□□□□ 0.83
SCARB1-205ENST00000538291 CCAR1Q8IX12 1150 aaKnown RBP20.21■□□□□ 0.83
SCARB1-205ENST00000538291 HIP1O00291 1037 aa20.21■□□□□ 0.83
SCARB1-205ENST00000538291 ERC1Q8IUD2 1116 aa20.21■□□□□ 0.83
SCARB1-205ENST00000538291 PRAM1Q96QH2 718 aa20.21■□□□□ 0.83
SCARB1-205ENST00000538291 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
SCARB1-205ENST00000538291 CNNM1Q9NRU3 951 aa20.2■□□□□ 0.82
SCARB1-205ENST00000538291 NAT10Q9H0A0 1025 aaKnown RBP20.19■□□□□ 0.82
SCARB1-205ENST00000538291 SDF4Q9BRK5 362 aa20.19■□□□□ 0.82
SCARB1-205ENST00000538291 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.821e-6■■■■■ 79.4
SCARB1-205ENST00000538291 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
SCARB1-205ENST00000538291 CCDC158Q5M9N0 1113 aa20.18■□□□□ 0.82
SCARB1-205ENST00000538291 CNTLNQ9NXG0 1405 aa20.18■□□□□ 0.82
SCARB1-205ENST00000538291 TOM1L2Q6ZVM7 507 aa20.18■□□□□ 0.82
SCARB1-205ENST00000538291 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-205ENST00000538291 CABP4P57796 275 aa20.17■□□□□ 0.82
SCARB1-205ENST00000538291 TWISTNBQ3B726 338 aaPredicted RBP20.17■□□□□ 0.82
SCARB1-205ENST00000538291 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
SCARB1-205ENST00000538291 BRD4O60885 1362 aaPredicted RBP20.17■□□□□ 0.82
SCARB1-205ENST00000538291 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
SCARB1-205ENST00000538291 CDR1P51861 262 aa20.16■□□□□ 0.82
SCARB1-205ENST00000538291 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-205ENST00000538291 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms