RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
NPIPB3-208ENST00000537983 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
NPIPB3-208ENST00000537983 BEGAINQ9BUH8 593 aa8.48□□□□□ -1.05
NPIPB3-208ENST00000537983 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
NPIPB3-208ENST00000537983 ANKRD13DQ6ZTN6 518 aa8.47□□□□□ -1.05
NPIPB3-208ENST00000537983 SULF1Q8IWU6 871 aa8.47□□□□□ -1.05
NPIPB3-208ENST00000537983 MAP3K1Q13233 1512 aa8.47□□□□□ -1.05
NPIPB3-208ENST00000537983 IQGAP2Q13576 1575 aa8.47□□□□□ -1.05
NPIPB3-208ENST00000537983 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.06
NPIPB3-208ENST00000537983 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-208ENST00000537983 ZFRQ96KR1 1074 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-208ENST00000537983 CFAP43Q8NDM7 1665 aa8.46□□□□□ -1.06
NPIPB3-208ENST00000537983 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 PCF11O94913 1555 aaKnown RBP8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 POTEMA6NI47 508 aa8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 FYCO1Q9BQS8 1478 aa8.45□□□□□ -1.06
NPIPB3-208ENST00000537983 SLC10A3P09131 477 aa8.44□□□□□ -1.06
NPIPB3-208ENST00000537983 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
NPIPB3-208ENST00000537983 UGGT2Q9NYU1 1516 aa8.44□□□□□ -1.06
NPIPB3-208ENST00000537983 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-208ENST00000537983 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
NPIPB3-208ENST00000537983 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
NPIPB3-208ENST00000537983 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
NPIPB3-208ENST00000537983 SLF2Q8IX21 1173 aa8.42□□□□□ -1.06
NPIPB3-208ENST00000537983 SPIRE2Q8WWL2 714 aa8.42□□□□□ -1.06
NPIPB3-208ENST00000537983 TBC1D2Q9BYX2 928 aa8.42□□□□□ -1.06
NPIPB3-208ENST00000537983 FHOD3Q2V2M9 1422 aa8.42□□□□□ -1.06
NPIPB3-208ENST00000537983 KIAA0586Q9BVV6 1533 aa8.42□□□□□ -1.06
NPIPB3-208ENST00000537983 CASKIN1Q8WXD9 1431 aa8.41□□□□□ -1.06
NPIPB3-208ENST00000537983 MYSM1Q5VVJ2 828 aa8.41□□□□□ -1.06
NPIPB3-208ENST00000537983 RDH13Q8NBN7 331 aa8.41□□□□□ -1.06
NPIPB3-208ENST00000537983 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
NPIPB3-208ENST00000537983 CEP170Q5SW79 1584 aa8.4□□□□□ -1.06
NPIPB3-208ENST00000537983 NUP160Q12769 1436 aa8.4□□□□□ -1.06
NPIPB3-208ENST00000537983 GCGRP47871 477 aa8.4□□□□□ -1.06
NPIPB3-208ENST00000537983 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
NPIPB3-208ENST00000537983 RSPH6AQ9H0K4 717 aa8.4□□□□□ -1.06
NPIPB3-208ENST00000537983 KIAA0556O60303 1618 aa8.4□□□□□ -1.07
NPIPB3-208ENST00000537983 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-208ENST00000537983 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
NPIPB3-208ENST00000537983 LRCH3Q96II8 777 aa8.39□□□□□ -1.07
NPIPB3-208ENST00000537983 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
NPIPB3-208ENST00000537983 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-208ENST00000537983 ANKK1Q8NFD2 765 aa8.38□□□□□ -1.07
NPIPB3-208ENST00000537983 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.38□□□□□ -1.07
NPIPB3-208ENST00000537983 HECW1Q76N89 1606 aa8.38□□□□□ -1.07
NPIPB3-208ENST00000537983 SOWAHBA6NEL2 793 aa8.37□□□□□ -1.07
NPIPB3-208ENST00000537983 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
NPIPB3-208ENST00000537983 NUTM1Q86Y26 1132 aa8.37□□□□□ -1.07
NPIPB3-208ENST00000537983 STAC3Q96MF2 364 aa8.37□□□□□ -1.07
NPIPB3-208ENST00000537983 PCMTD1Q96MG8 357 aaPredicted RBP8.37□□□□□ -1.07
NPIPB3-208ENST00000537983 LRRC9Q6ZRR7 1453 aa8.37□□□□□ -1.07
NPIPB3-208ENST00000537983 GOLGA8CPA6NN73 597 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 KDM4AO75164 1064 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 CFHP08603 1231 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 CLK2P49760 499 aaKnown RBP8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 BCAMP50895 628 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 USP46P62068 366 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 WNT2BQ93097 391 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
NPIPB3-208ENST00000537983 MOXD2PA6NHM9 499 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 SPTLC1O15269 473 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 HOXA2O43364 376 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 RNF40O75150 1001 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 HRCP23327 699 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 RSBN1LQ6PCB5 846 aaPredicted RBP8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 PROCA1Q8NCQ7 364 aaPredicted RBP8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 LIMD1Q9UGP4 676 aa8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 RRBP1Q9P2E9 1410 aaKnown RBP8.35□□□□□ -1.07
NPIPB3-208ENST00000537983 CHD1O14646 1710 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 GJA5P36382 358 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
NPIPB3-208ENST00000537983 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.08
NPIPB3-208ENST00000537983 NDUFV2P19404 249 aa8.33□□□□□ -1.08
NPIPB3-208ENST00000537983 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
NPIPB3-208ENST00000537983 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-208ENST00000537983 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
NPIPB3-208ENST00000537983 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
NPIPB3-208ENST00000537983 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
NPIPB3-208ENST00000537983 CARMIL2Q6F5E8 1435 aa8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 ACTN4O43707 911 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 FUT2Q10981 343 aa8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 HLA-CQ95604 372 aa8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
NPIPB3-208ENST00000537983 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
NPIPB3-208ENST00000537983 APLP1P51693 650 aa8.3□□□□□ -1.08
NPIPB3-208ENST00000537983 PPP4CP60510 307 aa8.3□□□□□ -1.08
NPIPB3-208ENST00000537983 SUPT6HQ7KZ85 1726 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms