RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 HSPA5P11021 654 aaKnown RBP9.09□□□□□ -0.95
CDCA3-205ENST00000535871 NBPF1Q3BBV0 1214 aa9.09□□□□□ -0.95
CDCA3-205ENST00000535871 CFAP70Q5T0N1 1121 aa9.09□□□□□ -0.95
CDCA3-205ENST00000535871 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
CDCA3-205ENST00000535871 SETD1AO15047 1707 aaKnown RBP9.08□□□□□ -0.96
CDCA3-205ENST00000535871 POLA2Q14181 598 aa9.08□□□□□ -0.96
CDCA3-205ENST00000535871 TXNDC2Q86VQ3 553 aa9.08□□□□□ -0.96
CDCA3-205ENST00000535871 NRXN3Q9Y4C0 1643 aa9.08□□□□□ -0.96
CDCA3-205ENST00000535871 ADAMTS13Q76LX8 1427 aa9.07□□□□□ -0.96
CDCA3-205ENST00000535871 LTKP29376 864 aa9.07□□□□□ -0.96
CDCA3-205ENST00000535871 KNDC1Q76NI1 1749 aa9.07□□□□□ -0.96
CDCA3-205ENST00000535871 YTHDC2Q9H6S0 1430 aaKnown RBP9.06□□□□□ -0.96
CDCA3-205ENST00000535871 ST20-MTHFSA0A0A6YYL1 179 aa9.06□□□□□ -0.96
CDCA3-205ENST00000535871 TESK2Q96S53 571 aa9.06□□□□□ -0.96
CDCA3-205ENST00000535871 PTCH1Q13635 1447 aa9.05□□□□□ -0.96
CDCA3-205ENST00000535871 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
CDCA3-205ENST00000535871 TMF1P82094 1093 aa9.05□□□□□ -0.96
CDCA3-205ENST00000535871 CPS1P31327 1500 aa9.05□□□□□ -0.96
CDCA3-205ENST00000535871 CENPJQ9HC77 1338 aaPredicted RBP9.05□□□□□ -0.96
CDCA3-205ENST00000535871 CCDC7Q96M83 1385 aa9.04□□□□□ -0.96
CDCA3-205ENST00000535871 NINLQ9Y2I6 1382 aa9.04□□□□□ -0.96
CDCA3-205ENST00000535871 LMTK3Q96Q04 1460 aa9.03□□□□□ -0.96
CDCA3-205ENST00000535871 ARHGEF28Q8N1W1 1705 aaKnown RBP9.03□□□□□ -0.96
CDCA3-205ENST00000535871 NPHP4O75161 1426 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-205ENST00000535871 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
CDCA3-205ENST00000535871 NCOA3Q9Y6Q9 1424 aa9.02□□□□□ -0.97
CDCA3-205ENST00000535871 METP08581 1390 aa9.01□□□□□ -0.97
CDCA3-205ENST00000535871 SPINK5Q9NQ38 1064 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-205ENST00000535871 KIF7Q2M1P5 1343 aa9.01□□□□□ -0.97
CDCA3-205ENST00000535871 EVC2Q86UK5 1308 aa9.01□□□□□ -0.97
CDCA3-205ENST00000535871 XRN1Q8IZH2 1706 aaKnown RBP9□□□□□ -0.97
CDCA3-205ENST00000535871 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
CDCA3-205ENST00000535871 TRAK1Q9UPV9 953 aa9□□□□□ -0.97
CDCA3-205ENST00000535871 ZBTB12Q9Y330 459 aaPredicted RBP9□□□□□ -0.97
CDCA3-205ENST00000535871 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
CDCA3-205ENST00000535871 ADGRB2O60241 1585 aa8.99□□□□□ -0.97
CDCA3-205ENST00000535871 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
CDCA3-205ENST00000535871 CHD2O14647 1828 aaKnown RBP8.99□□□□□ -0.97
CDCA3-205ENST00000535871 NUTM2DQ5VT03 806 aaPredicted RBP8.99□□□□□ -0.97
CDCA3-205ENST00000535871 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
CDCA3-205ENST00000535871 TMEM132EQ6IEE7 984 aa8.99□□□□□ -0.97
CDCA3-205ENST00000535871 NKTRP30414 1462 aaKnown RBP8.99□□□□□ -0.97
CDCA3-205ENST00000535871 QRICH2Q9H0J4 1663 aa8.99□□□□□ -0.97
CDCA3-205ENST00000535871 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
CDCA3-205ENST00000535871 CAPN15O75808 1086 aa8.98□□□□□ -0.97
CDCA3-205ENST00000535871 KCNA6P17658 529 aa8.98□□□□□ -0.97
CDCA3-205ENST00000535871 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
CDCA3-205ENST00000535871 C11orf95C9JLR9 678 aaPredicted RBP8.97□□□□□ -0.97
CDCA3-205ENST00000535871 RGL2O15211 777 aa8.97□□□□□ -0.97
CDCA3-205ENST00000535871 PRAM1Q96QH2 718 aa8.97□□□□□ -0.97
CDCA3-205ENST00000535871 POGKQ9P215 609 aa8.97□□□□□ -0.97
CDCA3-205ENST00000535871 AMOTL2Q9Y2J4 779 aa8.97□□□□□ -0.97
CDCA3-205ENST00000535871 NPC1L1Q9UHC9 1359 aa8.97□□□□□ -0.97
CDCA3-205ENST00000535871 PTPRUQ92729 1446 aa8.97□□□□□ -0.97
CDCA3-205ENST00000535871 SLC26A8Q96RN1 970 aa8.96□□□□□ -0.98
CDCA3-205ENST00000535871 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
CDCA3-205ENST00000535871 ROBO2Q9HCK4 1378 aa8.96□□□□□ -0.98
CDCA3-205ENST00000535871 DISP3Q9P2K9 1392 aa8.96□□□□□ -0.98
CDCA3-205ENST00000535871 DCCP43146 1447 aa8.95□□□□□ -0.98
CDCA3-205ENST00000535871 ANKARQ7Z5J8 1434 aa8.94□□□□□ -0.98
CDCA3-205ENST00000535871 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
CDCA3-205ENST00000535871 STRCQ7RTU9 1775 aa8.94□□□□□ -0.98
CDCA3-205ENST00000535871 WASLO00401 505 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-205ENST00000535871 DDX10Q13206 875 aaKnown RBP8.93□□□□□ -0.98
CDCA3-205ENST00000535871 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-205ENST00000535871 STK26Q9P289 416 aa8.93□□□□□ -0.98
CDCA3-205ENST00000535871 NCKAP5LQ9HCH0 1330 aa8.93□□□□□ -0.98
CDCA3-205ENST00000535871 BRD4O60885 1362 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-205ENST00000535871 CDC42BPGQ6DT37 1551 aa8.93□□□□□ -0.98
CDCA3-205ENST00000535871 ATP7BP35670 1465 aa8.92□□□□□ -0.98
CDCA3-205ENST00000535871 ADGRL3Q9HAR2 1447 aa8.92□□□□□ -0.98
CDCA3-205ENST00000535871 PER1O15534 1290 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-205ENST00000535871 CCDC61Q9Y6R9 512 aa8.92□□□□□ -0.98
CDCA3-205ENST00000535871 NSD2O96028 1365 aa8.91□□□□□ -0.98
CDCA3-205ENST00000535871 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
CDCA3-205ENST00000535871 NBR1Q14596 966 aa8.91□□□□□ -0.98
CDCA3-205ENST00000535871 MYOM1P52179 1685 aa8.91□□□□□ -0.98
CDCA3-205ENST00000535871 USP32Q8NFA0 1604 aa8.91□□□□□ -0.98
CDCA3-205ENST00000535871 PLEKHH1Q9ULM0 1364 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 CCER2I3L3R5 266 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 ANP32CO43423 234 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 WAPLQ7Z5K2 1190 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 ZNF692Q9BU19 519 aaPredicted RBP8.9□□□□□ -0.98
CDCA3-205ENST00000535871 CDK19Q9BWU1 502 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 TERF2IPQ9NYB0 399 aa8.9□□□□□ -0.98
CDCA3-205ENST00000535871 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.9□□□□□ -0.98
CDCA3-205ENST00000535871 SRPK2P78362 688 aaKnown RBP8.89□□□□□ -0.99
CDCA3-205ENST00000535871 RALBP1Q15311 655 aa8.89□□□□□ -0.99
CDCA3-205ENST00000535871 C19orf44Q9H6X5 657 aa8.89□□□□□ -0.99
CDCA3-205ENST00000535871 CPSF1Q10570 1443 aaKnown RBP8.88□□□□□ -0.99
CDCA3-205ENST00000535871 ITSN1Q15811 1721 aa8.88□□□□□ -0.99
CDCA3-205ENST00000535871 MINK1Q8N4C8 1332 aaPredicted RBP8.88□□□□□ -0.99
CDCA3-205ENST00000535871 ABCB7O75027 752 aa8.88□□□□□ -0.99
CDCA3-205ENST00000535871 HSPA2P54652 639 aa8.88□□□□□ -0.99
CDCA3-205ENST00000535871 MIER1Q8N108 512 aa8.88□□□□□ -0.99
CDCA3-205ENST00000535871 PANK3Q9H999 370 aa8.88□□□□□ -0.99
CDCA3-205ENST00000535871 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
CDCA3-205ENST00000535871 KNSTRNQ9Y448 316 aa8.88□□□□□ -0.99
CDCA3-205ENST00000535871 POLR3AO14802 1390 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1139.6 ms