RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 HRO43593 1189 aa11.58□□□□□ -0.56
PCM1-216ENST00000522777 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
PCM1-216ENST00000522777 FUT2Q10981 343 aa11.58□□□□□ -0.56
PCM1-216ENST00000522777 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
PCM1-216ENST00000522777 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
PCM1-216ENST00000522777 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
PCM1-216ENST00000522777 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
PCM1-216ENST00000522777 RAD21O60216 631 aa11.56□□□□□ -0.56
PCM1-216ENST00000522777 AP1G2O75843 785 aa11.56□□□□□ -0.56
PCM1-216ENST00000522777 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
PCM1-216ENST00000522777 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
PCM1-216ENST00000522777 RNF40O75150 1001 aa11.55□□□□□ -0.56
PCM1-216ENST00000522777 MTMR2Q13614 643 aa11.54□□□□□ -0.56
PCM1-216ENST00000522777 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
PCM1-216ENST00000522777 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.57
PCM1-216ENST00000522777 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
PCM1-216ENST00000522777 ARID3AQ99856 593 aa11.52□□□□□ -0.57
PCM1-216ENST00000522777 CFAP99D6REC4 459 aa11.51□□□□□ -0.57
PCM1-216ENST00000522777 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
PCM1-216ENST00000522777 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
PCM1-216ENST00000522777 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
PCM1-216ENST00000522777 KMT5BQ4FZB7 885 aa11.5□□□□□ -0.57
PCM1-216ENST00000522777 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.5□□□□□ -0.57
PCM1-216ENST00000522777 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
PCM1-216ENST00000522777 MORN1Q5T089 497 aa11.49□□□□□ -0.57
PCM1-216ENST00000522777 CCDC82Q8N4S0 544 aa11.49□□□□□ -0.57
PCM1-216ENST00000522777 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
PCM1-216ENST00000522777 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
PCM1-216ENST00000522777 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
PCM1-216ENST00000522777 NECTIN2Q92692 538 aa11.48□□□□□ -0.57
PCM1-216ENST00000522777 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
PCM1-216ENST00000522777 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
PCM1-216ENST00000522777 GPR37L1O60883 481 aa11.47□□□□□ -0.57
PCM1-216ENST00000522777 SYMPKQ92797 1274 aaKnown RBP11.47□□□□□ -0.57
PCM1-216ENST00000522777 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
PCM1-216ENST00000522777 SOWAHBA6NEL2 793 aa11.45□□□□□ -0.58
PCM1-216ENST00000522777 PUS10Q3MIT2 529 aaKnown RBP11.45□□□□□ -0.58
PCM1-216ENST00000522777 ANKK1Q8NFD2 765 aa11.45□□□□□ -0.58
PCM1-216ENST00000522777 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
PCM1-216ENST00000522777 SLC27A5Q9Y2P5 690 aa11.45□□□□□ -0.58
PCM1-216ENST00000522777 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
PCM1-216ENST00000522777 LRRN4Q8WUT4 740 aa11.44□□□□□ -0.58
PCM1-216ENST00000522777 PLSCR2Q9NRY7 297 aa11.44□□□□□ -0.58
PCM1-216ENST00000522777 ABL2P42684 1182 aa11.43□□□□□ -0.58
PCM1-216ENST00000522777 BCAMP50895 628 aa11.43□□□□□ -0.58
PCM1-216ENST00000522777 PRR7Q8TB68 274 aa11.43□□□□□ -0.58
PCM1-216ENST00000522777 PRR14Q9BWN1 585 aa11.43□□□□□ -0.58
PCM1-216ENST00000522777 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
PCM1-216ENST00000522777 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
PCM1-216ENST00000522777 APLP1P51693 650 aa11.42□□□□□ -0.58
PCM1-216ENST00000522777 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
PCM1-216ENST00000522777 HPS5Q9UPZ3 1129 aa11.42□□□□□ -0.58
PCM1-216ENST00000522777 NESP48681 1621 aa11.42□□□□□ -0.58
PCM1-216ENST00000522777 IRF5Q13568 498 aa11.41□□□□□ -0.58
PCM1-216ENST00000522777 TSC1Q92574 1164 aa11.41□□□□□ -0.58
PCM1-216ENST00000522777 PRM3Q9NNZ6 103 aa11.41□□□□□ -0.58
PCM1-216ENST00000522777 RNF19BQ6ZMZ0 732 aa11.4□□□□□ -0.58
PCM1-216ENST00000522777 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
PCM1-216ENST00000522777 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 POM121CA8CG34 1229 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 PPP4CP60510 307 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 Q3C1V9 767 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 BLOC1S3Q6QNY0 202 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 WNT2BQ93097 391 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 KRTAP3-3Q9BYR6 98 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 KRTAP3-2Q9BYR7 98 aa11.39□□□□□ -0.59
PCM1-216ENST00000522777 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
PCM1-216ENST00000522777 EPS8L1Q8TE68 723 aa11.38□□□□□ -0.59
PCM1-216ENST00000522777 DESI1Q6ICB0 168 aa11.37□□□□□ -0.59
PCM1-216ENST00000522777 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
PCM1-216ENST00000522777 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
PCM1-216ENST00000522777 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
PCM1-216ENST00000522777 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
PCM1-216ENST00000522777 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
PCM1-216ENST00000522777 BRICD5Q6PL45 260 aa11.35□□□□□ -0.59
PCM1-216ENST00000522777 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
PCM1-216ENST00000522777 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
PCM1-216ENST00000522777 PCDHB3Q9Y5E6 796 aa11.34□□□□□ -0.59
PCM1-216ENST00000522777 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
PCM1-216ENST00000522777 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
PCM1-216ENST00000522777 SCUBE3Q8IX30 993 aa11.33□□□□□ -0.6
PCM1-216ENST00000522777 GLMNQ92990 594 aa11.33□□□□□ -0.6
PCM1-216ENST00000522777 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
PCM1-216ENST00000522777 NR6A1Q15406 480 aa11.32□□□□□ -0.6
PCM1-216ENST00000522777 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
PCM1-216ENST00000522777 USB1Q9BQ65 265 aaKnown RBP11.32□□□□□ -0.6
PCM1-216ENST00000522777 ADAMTS19Q8TE59 1207 aa11.31□□□□□ -0.6
PCM1-216ENST00000522777 NR1I2O75469 434 aa11.3□□□□□ -0.6
PCM1-216ENST00000522777 THSD4Q6ZMP0 1018 aa11.3□□□□□ -0.6
PCM1-216ENST00000522777 FMNL1O95466 1100 aaPredicted RBP11.29□□□□□ -0.6
PCM1-216ENST00000522777 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
PCM1-216ENST00000522777 CALR3Q96L12 384 aaKnown RBP11.29□□□□□ -0.6
PCM1-216ENST00000522777 VAC14Q08AM6 782 aa11.28□□□□□ -0.6
PCM1-216ENST00000522777 PDS5BQ9NTI5 1447 aa11.27□□□□□ -0.6
PCM1-216ENST00000522777 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
PCM1-216ENST00000522777 JUNDP17535 347 aa11.27□□□□□ -0.61
PCM1-216ENST00000522777 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
PCM1-216ENST00000522777 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
PCM1-216ENST00000522777 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms