RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-214ENST00000521550 MYOM2P54296 1465 aa18.95■□□□□ 0.62
SPIDR-214ENST00000521550 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
SPIDR-214ENST00000521550 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
SPIDR-214ENST00000521550 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
SPIDR-214ENST00000521550 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
SPIDR-214ENST00000521550 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
SPIDR-214ENST00000521550 PARD3Q8TEW0 1356 aa18.91■□□□□ 0.62
SPIDR-214ENST00000521550 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
SPIDR-214ENST00000521550 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
SPIDR-214ENST00000521550 MSH6P52701 1360 aa18.88■□□□□ 0.61
SPIDR-214ENST00000521550 PANK3Q9H999 370 aa18.88■□□□□ 0.61
SPIDR-214ENST00000521550 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
SPIDR-214ENST00000521550 NRXN3Q9Y4C0 1643 aa18.87■□□□□ 0.61
SPIDR-214ENST00000521550 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
SPIDR-214ENST00000521550 NEXMIFQ5QGS0 1516 aa18.87■□□□□ 0.61
SPIDR-214ENST00000521550 SMG6Q86US8 1419 aaKnown RBP18.87■□□□□ 0.61
SPIDR-214ENST00000521550 LRPPRCP42704 1394 aaKnown RBP18.86■□□□□ 0.61
SPIDR-214ENST00000521550 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
SPIDR-214ENST00000521550 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
SPIDR-214ENST00000521550 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
SPIDR-214ENST00000521550 INSRP06213 1382 aa18.84■□□□□ 0.61
SPIDR-214ENST00000521550 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
SPIDR-214ENST00000521550 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
SPIDR-214ENST00000521550 ROBO1Q9Y6N7 1651 aa18.83■□□□□ 0.61
SPIDR-214ENST00000521550 ILDR2Q71H61 639 aa18.83■□□□□ 0.6
SPIDR-214ENST00000521550 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
SPIDR-214ENST00000521550 MED1Q15648 1581 aaPredicted RBP18.83■□□□□ 0.6
SPIDR-214ENST00000521550 IFT172Q9UG01 1749 aa18.83■□□□□ 0.6
SPIDR-214ENST00000521550 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
SPIDR-214ENST00000521550 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
SPIDR-214ENST00000521550 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
SPIDR-214ENST00000521550 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
SPIDR-214ENST00000521550 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
SPIDR-214ENST00000521550 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
SPIDR-214ENST00000521550 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
SPIDR-214ENST00000521550 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
SPIDR-214ENST00000521550 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-214ENST00000521550 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
SPIDR-214ENST00000521550 METP08581 1390 aa18.79■□□□□ 0.6
SPIDR-214ENST00000521550 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
SPIDR-214ENST00000521550 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
SPIDR-214ENST00000521550 PPLO60437 1756 aa18.78■□□□□ 0.6
SPIDR-214ENST00000521550 SBNO2Q9Y2G9 1366 aa18.77■□□□□ 0.59
SPIDR-214ENST00000521550 CADPS2Q86UW7 1296 aa18.77■□□□□ 0.59
SPIDR-214ENST00000521550 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
SPIDR-214ENST00000521550 ATF3P18847 181 aa18.76■□□□□ 0.59
SPIDR-214ENST00000521550 ASXL1Q8IXJ9 1541 aa18.74■□□□□ 0.59
SPIDR-214ENST00000521550 C14orf93Q9H972 538 aaKnown RBP18.74■□□□□ 0.59
SPIDR-214ENST00000521550 TSHZ2Q9NRE2 1034 aa18.73■□□□□ 0.59
SPIDR-214ENST00000521550 SETD1AO15047 1707 aaKnown RBP18.73■□□□□ 0.59
SPIDR-214ENST00000521550 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
SPIDR-214ENST00000521550 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
SPIDR-214ENST00000521550 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
SPIDR-214ENST00000521550 PIK3C2GO75747 1445 aa18.72■□□□□ 0.59
SPIDR-214ENST00000521550 IRX6P78412 446 aaPredicted RBP18.72■□□□□ 0.59
SPIDR-214ENST00000521550 DCCP43146 1447 aa18.7■□□□□ 0.58
SPIDR-214ENST00000521550 SOCS7O14512 581 aa18.69■□□□□ 0.58
SPIDR-214ENST00000521550 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPIDR-214ENST00000521550 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
SPIDR-214ENST00000521550 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-214ENST00000521550 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
SPIDR-214ENST00000521550 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
SPIDR-214ENST00000521550 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
SPIDR-214ENST00000521550 ADGRL3Q9HAR2 1447 aa18.67■□□□□ 0.58
SPIDR-214ENST00000521550 MYOM1P52179 1685 aa18.66■□□□□ 0.58
SPIDR-214ENST00000521550 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
SPIDR-214ENST00000521550 PUS7Q96PZ0 661 aaKnown RBP18.65■□□□□ 0.58
SPIDR-214ENST00000521550 COL16A1Q07092 1604 aaPredicted RBP18.65■□□□□ 0.58
SPIDR-214ENST00000521550 TRAK1Q9UPV9 953 aa18.64■□□□□ 0.57
SPIDR-214ENST00000521550 JCADQ9P266 1359 aa18.64■□□□□ 0.57
SPIDR-214ENST00000521550 AHDC1Q5TGY3 1603 aaPredicted RBP18.64■□□□□ 0.57
SPIDR-214ENST00000521550 BRINP3Q76B58 766 aa18.63■□□□□ 0.57
SPIDR-214ENST00000521550 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
SPIDR-214ENST00000521550 MST1RQ04912 1400 aa18.63■□□□□ 0.57
SPIDR-214ENST00000521550 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
SPIDR-214ENST00000521550 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
SPIDR-214ENST00000521550 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
SPIDR-214ENST00000521550 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.57
SPIDR-214ENST00000521550 NHSL1Q5SYE7 1610 aa18.57■□□□□ 0.56
SPIDR-214ENST00000521550 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
SPIDR-214ENST00000521550 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
SPIDR-214ENST00000521550 STK26Q9P289 416 aa18.56■□□□□ 0.56
SPIDR-214ENST00000521550 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
SPIDR-214ENST00000521550 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
SPIDR-214ENST00000521550 SALL2Q9Y467 1007 aaPredicted RBP18.56■□□□□ 0.56
SPIDR-214ENST00000521550 SHPRHQ149N8 1683 aa18.56■□□□□ 0.56
SPIDR-214ENST00000521550 SPATA31A6Q5VVP1 1343 aa18.55■□□□□ 0.56
SPIDR-214ENST00000521550 C1orf167Q5SNV9 1468 aa18.55■□□□□ 0.56
SPIDR-214ENST00000521550 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
SPIDR-214ENST00000521550 TECPR2O15040 1411 aa18.54■□□□□ 0.56
SPIDR-214ENST00000521550 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
SPIDR-214ENST00000521550 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
SPIDR-214ENST00000521550 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
SPIDR-214ENST00000521550 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
SPIDR-214ENST00000521550 ABCC11Q96J66 1382 aa18.53■□□□□ 0.56
SPIDR-214ENST00000521550 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.55
SPIDR-214ENST00000521550 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
SPIDR-214ENST00000521550 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
SPIDR-214ENST00000521550 MORC1Q86VD1 984 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms