RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 TBX22Q9Y458 520 aa17.41■□□□□ 0.38
R3HCC1-205ENST00000519952 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
R3HCC1-205ENST00000519952 MST1RQ04912 1400 aa17.38■□□□□ 0.37
R3HCC1-205ENST00000519952 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
R3HCC1-205ENST00000519952 DCCP43146 1447 aa17.37■□□□□ 0.37
R3HCC1-205ENST00000519952 TRPM2O94759 1503 aa17.37■□□□□ 0.37
R3HCC1-205ENST00000519952 BRWD3Q6RI45 1802 aa17.36■□□□□ 0.37
R3HCC1-205ENST00000519952 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
R3HCC1-205ENST00000519952 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
R3HCC1-205ENST00000519952 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
R3HCC1-205ENST00000519952 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
R3HCC1-205ENST00000519952 R3HDM1Q15032 1099 aaKnown RBP17.35■□□□□ 0.37
R3HCC1-205ENST00000519952 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
R3HCC1-205ENST00000519952 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
R3HCC1-205ENST00000519952 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
R3HCC1-205ENST00000519952 AMOTL2Q9Y2J4 779 aa17.33■□□□□ 0.36
R3HCC1-205ENST00000519952 BAG6P46379 1132 aa17.32■□□□□ 0.36
R3HCC1-205ENST00000519952 KDM2AQ9Y2K7 1162 aa17.32■□□□□ 0.36
R3HCC1-205ENST00000519952 KIF1BO60333 1816 aa17.32■□□□□ 0.36
R3HCC1-205ENST00000519952 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
R3HCC1-205ENST00000519952 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
R3HCC1-205ENST00000519952 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
R3HCC1-205ENST00000519952 CLTCL1P53675 1640 aa17.3■□□□□ 0.36
R3HCC1-205ENST00000519952 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
R3HCC1-205ENST00000519952 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
R3HCC1-205ENST00000519952 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
R3HCC1-205ENST00000519952 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
R3HCC1-205ENST00000519952 GLI3P10071 1580 aa17.28■□□□□ 0.36
R3HCC1-205ENST00000519952 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
R3HCC1-205ENST00000519952 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
R3HCC1-205ENST00000519952 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
R3HCC1-205ENST00000519952 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
R3HCC1-205ENST00000519952 PTPRUQ92729 1446 aa17.27■□□□□ 0.35
R3HCC1-205ENST00000519952 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
R3HCC1-205ENST00000519952 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
R3HCC1-205ENST00000519952 SOS2Q07890 1332 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-205ENST00000519952 UTRNP46939 3433 aa17.25■□□□□ 0.35
R3HCC1-205ENST00000519952 SPATA31E1Q6ZUB1 1445 aa17.25■□□□□ 0.35
R3HCC1-205ENST00000519952 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
R3HCC1-205ENST00000519952 EN1Q05925 392 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-205ENST00000519952 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
R3HCC1-205ENST00000519952 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
R3HCC1-205ENST00000519952 COL22A1Q8NFW1 1626 aaPredicted RBP17.24■□□□□ 0.35
R3HCC1-205ENST00000519952 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
R3HCC1-205ENST00000519952 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
R3HCC1-205ENST00000519952 UNC5CLQ8IV45 518 aa17.23■□□□□ 0.35
R3HCC1-205ENST00000519952 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.23■□□□□ 0.35
R3HCC1-205ENST00000519952 MYOM2P54296 1465 aa17.21■□□□□ 0.35
R3HCC1-205ENST00000519952 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
R3HCC1-205ENST00000519952 LAMC1P11047 1609 aa17.21■□□□□ 0.35
R3HCC1-205ENST00000519952 C1orf167Q5SNV9 1468 aa17.2■□□□□ 0.34
R3HCC1-205ENST00000519952 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
R3HCC1-205ENST00000519952 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
R3HCC1-205ENST00000519952 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
R3HCC1-205ENST00000519952 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
R3HCC1-205ENST00000519952 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
R3HCC1-205ENST00000519952 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
R3HCC1-205ENST00000519952 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
R3HCC1-205ENST00000519952 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
R3HCC1-205ENST00000519952 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
R3HCC1-205ENST00000519952 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
R3HCC1-205ENST00000519952 TRPM1Q7Z4N2 1603 aa17.15■□□□□ 0.34
R3HCC1-205ENST00000519952 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
R3HCC1-205ENST00000519952 A0A0G2JS52 829 aa17.14■□□□□ 0.33
R3HCC1-205ENST00000519952 MYT1Q01538 1121 aa17.14■□□□□ 0.33
R3HCC1-205ENST00000519952 CCDC9Q9Y3X0 531 aaKnown RBP17.14■□□□□ 0.33
R3HCC1-205ENST00000519952 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
R3HCC1-205ENST00000519952 SLIT2O94813 1529 aa17.13■□□□□ 0.33
R3HCC1-205ENST00000519952 EZH2Q15910 746 aaKnown RBP17.13■□□□□ 0.33
R3HCC1-205ENST00000519952 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
R3HCC1-205ENST00000519952 PPLO60437 1756 aa17.11■□□□□ 0.33
R3HCC1-205ENST00000519952 USP47Q96K76 1375 aa17.11■□□□□ 0.33
R3HCC1-205ENST00000519952 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
R3HCC1-205ENST00000519952 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
R3HCC1-205ENST00000519952 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
R3HCC1-205ENST00000519952 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
R3HCC1-205ENST00000519952 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
R3HCC1-205ENST00000519952 VPS72Q15906 364 aa17.09■□□□□ 0.33
R3HCC1-205ENST00000519952 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
R3HCC1-205ENST00000519952 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.32
R3HCC1-205ENST00000519952 GPRASP1Q5JY77 1395 aa17.07■□□□□ 0.32
R3HCC1-205ENST00000519952 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
R3HCC1-205ENST00000519952 METP08581 1390 aa17.06■□□□□ 0.32
R3HCC1-205ENST00000519952 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
R3HCC1-205ENST00000519952 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
R3HCC1-205ENST00000519952 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
R3HCC1-205ENST00000519952 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
R3HCC1-205ENST00000519952 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
R3HCC1-205ENST00000519952 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
R3HCC1-205ENST00000519952 KCNQ2O43526 872 aa17.03■□□□□ 0.32
R3HCC1-205ENST00000519952 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
R3HCC1-205ENST00000519952 C14orf93Q9H972 538 aaKnown RBP17.03■□□□□ 0.32
R3HCC1-205ENST00000519952 PXDNQ92626 1479 aa17.03■□□□□ 0.32
R3HCC1-205ENST00000519952 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
R3HCC1-205ENST00000519952 CHD4Q14839 1912 aa17.02■□□□□ 0.32
R3HCC1-205ENST00000519952 ST20-MTHFSA0A0A6YYL1 179 aa17.02■□□□□ 0.32
R3HCC1-205ENST00000519952 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
R3HCC1-205ENST00000519952 ESCO1Q5FWF5 840 aa17.02■□□□□ 0.32
R3HCC1-205ENST00000519952 CFAP70Q5T0N1 1121 aa17.02■□□□□ 0.32
R3HCC1-205ENST00000519952 USP32Q8NFA0 1604 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms