RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
EFCAB13-206ENST00000518646 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
EFCAB13-206ENST00000518646 DOK7Q18PE1 504 aa8.49□□□□□ -1.05
EFCAB13-206ENST00000518646 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
EFCAB13-206ENST00000518646 MTMR14Q8NCE2 650 aa8.49□□□□□ -1.05
EFCAB13-206ENST00000518646 CDHR5Q9HBB8 845 aa8.49□□□□□ -1.05
EFCAB13-206ENST00000518646 PRM3Q9NNZ6 103 aa8.48□□□□□ -1.05
EFCAB13-206ENST00000518646 KIF3CO14782 793 aa8.47□□□□□ -1.05
EFCAB13-206ENST00000518646 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
EFCAB13-206ENST00000518646 LSM11P83369 360 aaKnown RBP eCLIP8.47□□□□□ -1.05
EFCAB13-206ENST00000518646 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
EFCAB13-206ENST00000518646 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 EVI5O60447 810 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 RFX1P22670 979 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 Q6ZNB5 142 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 TBC1D2Q9BYX2 928 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 NPDC1Q9NQX5 325 aaPredicted RBP8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 USP35Q9P2H5 1018 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.06
EFCAB13-206ENST00000518646 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
EFCAB13-206ENST00000518646 NLRP7Q8WX94 980 aa8.45□□□□□ -1.06
EFCAB13-206ENST00000518646 TBC1D2BQ9UPU7 963 aa8.45□□□□□ -1.06
EFCAB13-206ENST00000518646 POLA1P09884 1462 aaPredicted RBP8.45□□□□□ -1.06
EFCAB13-206ENST00000518646 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
EFCAB13-206ENST00000518646 SHROOM2Q13796 1616 aa8.44□□□□□ -1.06
EFCAB13-206ENST00000518646 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
EFCAB13-206ENST00000518646 IFFO2Q5TF58 517 aa8.44□□□□□ -1.06
EFCAB13-206ENST00000518646 RAD54L2Q9Y4B4 1467 aa8.44□□□□□ -1.06
EFCAB13-206ENST00000518646 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
EFCAB13-206ENST00000518646 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
EFCAB13-206ENST00000518646 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.06
EFCAB13-206ENST00000518646 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
EFCAB13-206ENST00000518646 GRIN2BQ13224 1484 aa8.43□□□□□ -1.06
EFCAB13-206ENST00000518646 ADAMTSL3P82987 1691 aa8.43□□□□□ -1.06
EFCAB13-206ENST00000518646 CARNS1A5YM72 827 aa8.42□□□□□ -1.06
EFCAB13-206ENST00000518646 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
EFCAB13-206ENST00000518646 KIF21BO75037 1637 aa8.42□□□□□ -1.06
EFCAB13-206ENST00000518646 ADCY10Q96PN6 1610 aa8.42□□□□□ -1.06
EFCAB13-206ENST00000518646 MAP3K7O43318 606 aa8.41□□□□□ -1.06
EFCAB13-206ENST00000518646 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
EFCAB13-206ENST00000518646 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 OATP04181 439 aa8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 CDK11BP21127 795 aaKnown RBP8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 HDGFL1Q5TGJ6 251 aa8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 CDK11AQ9UQ88 783 aaPredicted RBP8.4□□□□□ -1.06
EFCAB13-206ENST00000518646 G3V3G9 751 aa8.39□□□□□ -1.07
EFCAB13-206ENST00000518646 RIMBP2O15034 1052 aa8.39□□□□□ -1.07
EFCAB13-206ENST00000518646 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
EFCAB13-206ENST00000518646 SOGA1O94964 1423 aa8.38□□□□□ -1.07
EFCAB13-206ENST00000518646 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
EFCAB13-206ENST00000518646 BOLA1Q9Y3E2 137 aa8.38□□□□□ -1.07
EFCAB13-206ENST00000518646 GLI2P10070 1586 aa8.38□□□□□ -1.07
EFCAB13-206ENST00000518646 AP1G2O75843 785 aa8.37□□□□□ -1.07
EFCAB13-206ENST00000518646 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
EFCAB13-206ENST00000518646 ADAMTS19Q8TE59 1207 aa8.37□□□□□ -1.07
EFCAB13-206ENST00000518646 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
EFCAB13-206ENST00000518646 EPAS1Q99814 870 aa8.37□□□□□ -1.07
EFCAB13-206ENST00000518646 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
EFCAB13-206ENST00000518646 PXYLP1Q8TE99 480 aa8.36□□□□□ -1.07
EFCAB13-206ENST00000518646 VRTNQ9H8Y1 702 aa8.36□□□□□ -1.07
EFCAB13-206ENST00000518646 PRG4Q92954 1404 aaPredicted RBP8.36□□□□□ -1.07
EFCAB13-206ENST00000518646 WIZO95785 1651 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 TEX14Q8IWB6 1497 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 LCE2BO14633 110 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 PHF14O94880 888 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 TSR1Q2NL82 804 aaKnown RBP8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 RSPH4AQ5TD94 716 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 PPP1R12CQ9BZL4 782 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 NUP160Q12769 1436 aa8.35□□□□□ -1.07
EFCAB13-206ENST00000518646 PBRM1Q86U86 1689 aa8.34□□□□□ -1.07
EFCAB13-206ENST00000518646 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
EFCAB13-206ENST00000518646 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
EFCAB13-206ENST00000518646 GRIN2AQ12879 1464 aa8.33□□□□□ -1.08
EFCAB13-206ENST00000518646 SPTLC1O15269 473 aa8.33□□□□□ -1.08
EFCAB13-206ENST00000518646 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
EFCAB13-206ENST00000518646 WASHC4Q2M389 1173 aa8.33□□□□□ -1.08
EFCAB13-206ENST00000518646 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
EFCAB13-206ENST00000518646 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
EFCAB13-206ENST00000518646 MADDQ8WXG6 1647 aa8.32□□□□□ -1.08
EFCAB13-206ENST00000518646 RSBN1LQ6PCB5 846 aaPredicted RBP8.32□□□□□ -1.08
EFCAB13-206ENST00000518646 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
EFCAB13-206ENST00000518646 ANO8Q9HCE9 1232 aaPredicted RBP8.32□□□□□ -1.08
EFCAB13-206ENST00000518646 LTBP4Q8N2S1 1624 aa8.32□□□□□ -1.08
EFCAB13-206ENST00000518646 TMEM88BA6NKF7 163 aa8.31□□□□□ -1.08
EFCAB13-206ENST00000518646 UBAP1LF5GYI3 381 aa8.31□□□□□ -1.08
EFCAB13-206ENST00000518646 LMOD1P29536 600 aaPredicted RBP8.31□□□□□ -1.08
EFCAB13-206ENST00000518646 QPCTQ16769 361 aa8.31□□□□□ -1.08
EFCAB13-206ENST00000518646 MAP3K4Q9Y6R4 1608 aa8.31□□□□□ -1.08
EFCAB13-206ENST00000518646 YEATS2Q9ULM3 1422 aa8.3□□□□□ -1.08
EFCAB13-206ENST00000518646 PALM3A6NDB9 673 aaPredicted RBP8.3□□□□□ -1.08
EFCAB13-206ENST00000518646 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
EFCAB13-206ENST00000518646 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
EFCAB13-206ENST00000518646 LILRB3O75022 631 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms