RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
EFCAB13-206ENST00000518646 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
EFCAB13-206ENST00000518646 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
EFCAB13-206ENST00000518646 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
EFCAB13-206ENST00000518646 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
EFCAB13-206ENST00000518646 FOXD1Q16676 465 aa16.88■□□□□ 0.29
EFCAB13-206ENST00000518646 MSH5O43196 834 aa16.22■□□□□ 0.19
EFCAB13-206ENST00000518646 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
EFCAB13-206ENST00000518646 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
EFCAB13-206ENST00000518646 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
EFCAB13-206ENST00000518646 ADRA2BP18089 450 aa14.65□□□□□ -0.06
EFCAB13-206ENST00000518646 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
EFCAB13-206ENST00000518646 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
EFCAB13-206ENST00000518646 POTEHQ6S545 545 aa13.96□□□□□ -0.17
EFCAB13-206ENST00000518646 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
EFCAB13-206ENST00000518646 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
EFCAB13-206ENST00000518646 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
EFCAB13-206ENST00000518646 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
EFCAB13-206ENST00000518646 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
EFCAB13-206ENST00000518646 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-206ENST00000518646 KCNA4P22459 653 aa13.09□□□□□ -0.31
EFCAB13-206ENST00000518646 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
EFCAB13-206ENST00000518646 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
EFCAB13-206ENST00000518646 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
EFCAB13-206ENST00000518646 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-206ENST00000518646 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
EFCAB13-206ENST00000518646 DSG3P32926 999 aa12.47□□□□□ -0.41
EFCAB13-206ENST00000518646 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
EFCAB13-206ENST00000518646 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
EFCAB13-206ENST00000518646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
EFCAB13-206ENST00000518646 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
EFCAB13-206ENST00000518646 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
EFCAB13-206ENST00000518646 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
EFCAB13-206ENST00000518646 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
EFCAB13-206ENST00000518646 CAPN15O75808 1086 aa12.17□□□□□ -0.46
EFCAB13-206ENST00000518646 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
EFCAB13-206ENST00000518646 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
EFCAB13-206ENST00000518646 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-206ENST00000518646 ZBTB22O15209 634 aa12.06□□□□□ -0.48
EFCAB13-206ENST00000518646 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
EFCAB13-206ENST00000518646 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
EFCAB13-206ENST00000518646 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
EFCAB13-206ENST00000518646 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
EFCAB13-206ENST00000518646 ABCB7O75027 752 aa11.81□□□□□ -0.52
EFCAB13-206ENST00000518646 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
EFCAB13-206ENST00000518646 HAX1O00165 279 aa11.73□□□□□ -0.53
EFCAB13-206ENST00000518646 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
EFCAB13-206ENST00000518646 LHX8Q68G74 356 aa11.66□□□□□ -0.54
EFCAB13-206ENST00000518646 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
EFCAB13-206ENST00000518646 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
EFCAB13-206ENST00000518646 EVX2Q03828 476 aa11.59□□□□□ -0.55
EFCAB13-206ENST00000518646 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
EFCAB13-206ENST00000518646 FKBP8Q14318 412 aa11.51□□□□□ -0.57
EFCAB13-206ENST00000518646 ABCC9O60706 1549 aa11.49□□□□□ -0.57
EFCAB13-206ENST00000518646 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
EFCAB13-206ENST00000518646 APLP2Q06481 763 aa11.32□□□□□ -0.6
EFCAB13-206ENST00000518646 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
EFCAB13-206ENST00000518646 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-206ENST00000518646 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
EFCAB13-206ENST00000518646 GABBR2O75899 941 aa11.19□□□□□ -0.62
EFCAB13-206ENST00000518646 PITPNM1O00562 1244 aa11.15□□□□□ -0.62
EFCAB13-206ENST00000518646 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
EFCAB13-206ENST00000518646 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
EFCAB13-206ENST00000518646 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
EFCAB13-206ENST00000518646 POTEMA6NI47 508 aa11.07□□□□□ -0.64
EFCAB13-206ENST00000518646 POLA2Q14181 598 aa11.07□□□□□ -0.64
EFCAB13-206ENST00000518646 PRKCSHP14314 528 aaPredicted RBP11.06□□□□□ -0.64
EFCAB13-206ENST00000518646 BCANQ96GW7 911 aa11.06□□□□□ -0.64
EFCAB13-206ENST00000518646 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
EFCAB13-206ENST00000518646 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
EFCAB13-206ENST00000518646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
EFCAB13-206ENST00000518646 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
EFCAB13-206ENST00000518646 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
EFCAB13-206ENST00000518646 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
EFCAB13-206ENST00000518646 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
EFCAB13-206ENST00000518646 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
EFCAB13-206ENST00000518646 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
EFCAB13-206ENST00000518646 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
EFCAB13-206ENST00000518646 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
EFCAB13-206ENST00000518646 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
EFCAB13-206ENST00000518646 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
EFCAB13-206ENST00000518646 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
EFCAB13-206ENST00000518646 OTUD5Q96G74 571 aa10.8□□□□□ -0.68
EFCAB13-206ENST00000518646 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
EFCAB13-206ENST00000518646 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
EFCAB13-206ENST00000518646 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
EFCAB13-206ENST00000518646 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
EFCAB13-206ENST00000518646 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
EFCAB13-206ENST00000518646 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
EFCAB13-206ENST00000518646 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
EFCAB13-206ENST00000518646 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
EFCAB13-206ENST00000518646 FBLN2P98095 1184 aa10.58□□□□□ -0.72
EFCAB13-206ENST00000518646 PKD2Q13563 968 aa10.58□□□□□ -0.72
EFCAB13-206ENST00000518646 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
EFCAB13-206ENST00000518646 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
EFCAB13-206ENST00000518646 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
EFCAB13-206ENST00000518646 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
EFCAB13-206ENST00000518646 BBXQ8WY36 941 aaPredicted RBP10.53□□□□□ -0.72
EFCAB13-206ENST00000518646 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
EFCAB13-206ENST00000518646 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms