RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SPRYD7Q5W111 196 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 LARP6Q9BRS8 491 aaKnown RBP4.39□□□□□ -1.71
SKP1-204ENST00000517691 HPS5Q9UPZ3 1129 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 CEP170Q5SW79 1584 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 BRPF1P55201 1214 aaPredicted RBP4.39□□□□□ -1.71
SKP1-204ENST00000517691 ZNF454Q8N9F8 522 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 PRG4Q92954 1404 aaPredicted RBP4.39□□□□□ -1.71
SKP1-204ENST00000517691 CRISPLD2Q9H0B8 497 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 SENP2Q9HC62 589 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 DNMT3AQ9Y6K1 912 aaPredicted RBP4.39□□□□□ -1.71
SKP1-204ENST00000517691 ARHGEF11O15085 1522 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 CLASP1Q7Z460 1538 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 KIAA0586Q9BVV6 1533 aa4.39□□□□□ -1.71
SKP1-204ENST00000517691 GDF9O60383 454 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.38□□□□□ -1.71
SKP1-204ENST00000517691 DACH1Q9UI36 760 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 PRXQ9BXM0 1461 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 PDE4AP27815 886 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 GPAT2Q6NUI2 795 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
SKP1-204ENST00000517691 Q8N3U1 123 aa4.37□□□□□ -1.71
SKP1-204ENST00000517691 ARIH1Q9Y4X5 557 aaPredicted RBP4.37□□□□□ -1.71
SKP1-204ENST00000517691 RIMBP3CA6NJZ7 1639 aa4.37□□□□□ -1.71
SKP1-204ENST00000517691 RIMBP3BA6NNM3 1639 aa4.37□□□□□ -1.71
SKP1-204ENST00000517691 RIMBP3Q9UFD9 1639 aa4.37□□□□□ -1.71
SKP1-204ENST00000517691 ONECUT3O60422 494 aaPredicted RBP4.36□□□□□ -1.71
SKP1-204ENST00000517691 CAMK2BQ13554 666 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 LRCH3Q96II8 777 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 MTRQ99707 1265 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 SLC24A3Q9HC58 644 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 CARMIL2Q6F5E8 1435 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 ZMYND10O75800 440 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 DSG2Q14126 1118 aa4.36□□□□□ -1.71
SKP1-204ENST00000517691 ARAP1Q96P48 1450 aa4.35□□□□□ -1.71
SKP1-204ENST00000517691 ERCC6L2Q5T890 1561 aa4.35□□□□□ -1.71
SKP1-204ENST00000517691 LOC105371045A0A1W2PR82 267 aa4.35□□□□□ -1.71
SKP1-204ENST00000517691 DDX27Q96GQ7 796 aaKnown RBP4.35□□□□□ -1.71
SKP1-204ENST00000517691 PTPRGP23470 1445 aa4.35□□□□□ -1.71
SKP1-204ENST00000517691 KIFC2Q96AC6 838 aa4.34□□□□□ -1.71
SKP1-204ENST00000517691 TRIM47Q96LD4 638 aa4.34□□□□□ -1.71
SKP1-204ENST00000517691 TNIKQ9UKE5 1360 aa4.34□□□□□ -1.71
SKP1-204ENST00000517691 GOLGA3Q08378 1498 aa4.34□□□□□ -1.71
SKP1-204ENST00000517691 IQGAP2Q13576 1575 aa4.34□□□□□ -1.71
SKP1-204ENST00000517691 FOSBP53539 338 aa4.34□□□□□ -1.71
SKP1-204ENST00000517691 PPP1R3GB7ZBB8 358 aa4.33□□□□□ -1.72
SKP1-204ENST00000517691 ZNF697Q5TEC3 545 aa4.33□□□□□ -1.72
SKP1-204ENST00000517691 ATP1B4Q9UN42 357 aaPredicted RBP4.33□□□□□ -1.72
SKP1-204ENST00000517691 SHROOM2Q13796 1616 aa4.33□□□□□ -1.72
SKP1-204ENST00000517691 ARID3CA6NKF2 412 aa4.33□□□□□ -1.72
SKP1-204ENST00000517691 PPP4CP60510 307 aa4.33□□□□□ -1.72
SKP1-204ENST00000517691 NXF1Q9UBU9 619 aaKnown RBP4.33□□□□□ -1.72
SKP1-204ENST00000517691 KIF21BO75037 1637 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 DISP1Q96F81 1524 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 UGGT2Q9NYU1 1516 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 MLLT3P42568 568 aaPredicted RBP4.32□□□□□ -1.72
SKP1-204ENST00000517691 NEUROD2Q15784 382 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 SMYD5Q6GMV2 418 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 BARGINQ6ZT62 677 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
SKP1-204ENST00000517691 SNRPBP14678 240 aaKnown RBP4.31□□□□□ -1.72
SKP1-204ENST00000517691 PLPP6Q8IY26 295 aa4.31□□□□□ -1.72
SKP1-204ENST00000517691 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
SKP1-204ENST00000517691 GPHNQ9NQX3 736 aaPredicted RBP4.31□□□□□ -1.72
SKP1-204ENST00000517691 TNFRSF10AO00220 468 aa4.31□□□□□ -1.72
SKP1-204ENST00000517691 FAM98CQ17RN3 349 aaKnown RBP4.31□□□□□ -1.72
SKP1-204ENST00000517691 RBM26Q5T8P6 1007 aaKnown RBP4.31□□□□□ -1.72
SKP1-204ENST00000517691 UPF1Q92900 1129 aaKnown RBP eCLIP4.31□□□□□ -1.72
SKP1-204ENST00000517691 UACAQ9BZF9 1416 aa4.3□□□□□ -1.72
SKP1-204ENST00000517691 FOXK1P85037 733 aa4.3□□□□□ -1.72
SKP1-204ENST00000517691 PPP1R15BQ5SWA1 713 aa4.3□□□□□ -1.72
SKP1-204ENST00000517691 EMILIN3Q9NT22 766 aa4.3□□□□□ -1.72
SKP1-204ENST00000517691 FHOD3Q2V2M9 1422 aa4.3□□□□□ -1.72
SKP1-204ENST00000517691 CTTNBP2Q8WZ74 1663 aa4.29□□□□□ -1.72
SKP1-204ENST00000517691 KIAA0556O60303 1618 aa4.29□□□□□ -1.72
SKP1-204ENST00000517691 PLB1Q6P1J6 1458 aa4.29□□□□□ -1.72
SKP1-204ENST00000517691 FAM69CQ0P6D2 419 aa4.29□□□□□ -1.72
SKP1-204ENST00000517691 ZDHHC16Q969W1 377 aa4.29□□□□□ -1.72
SKP1-204ENST00000517691 CLIP1P30622 1438 aa4.29□□□□□ -1.72
SKP1-204ENST00000517691 ZNF516Q92618 1163 aa4.28□□□□□ -1.72
SKP1-204ENST00000517691 GOLGA2P5Q9HBQ8 144 aa4.28□□□□□ -1.72
SKP1-204ENST00000517691 DPYSL4O14531 572 aa4.28□□□□□ -1.73
SKP1-204ENST00000517691 AK7Q96M32 723 aa4.28□□□□□ -1.73
SKP1-204ENST00000517691 ATP13A2Q9NQ11 1180 aa4.28□□□□□ -1.73
SKP1-204ENST00000517691 ARHGAP35Q9NRY4 1499 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 EFCAB5A4FU69 1503 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 ABCC2Q92887 1545 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 PLEKHD1A6NEE1 506 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 EMID1Q96A84 441 aaPredicted RBP4.27□□□□□ -1.73
SKP1-204ENST00000517691 ADCY10Q96PN6 1610 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 UHRF1BP1LA0JNW5 1464 aa4.27□□□□□ -1.73
SKP1-204ENST00000517691 CEP162Q5TB80 1403 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 FMN1Q68DA7 1419 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 H3BM21 787 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 PDIA6Q15084 440 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 GPIHBP1Q8IV16 184 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 ARID3AQ99856 593 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 GPBP1L1Q9HC44 474 aaPredicted RBP4.26□□□□□ -1.73
SKP1-204ENST00000517691 KIAA1468Q9P260 1216 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms