RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RSPO4Q2I0M5 234 aaPredicted RBP1.62□□□□□ -2.15
SNORA40.16-201ENST00000517238 PRSS36Q5K4E3 855 aa1.62□□□□□ -2.15
SNORA40.16-201ENST00000517238 CD163Q86VB7 1156 aa1.62□□□□□ -2.15
SNORA40.16-201ENST00000517238 TRIM6-TRIM34B2RNG4 842 aa1.61□□□□□ -2.15
SNORA40.16-201ENST00000517238 WNT7AO00755 349 aa1.61□□□□□ -2.15
SNORA40.16-201ENST00000517238 MAN1A2O60476 641 aa1.61□□□□□ -2.15
SNORA40.16-201ENST00000517238 IGHA2P01877 340 aa1.61□□□□□ -2.15
SNORA40.16-201ENST00000517238 PCDHB3Q9Y5E6 796 aa1.61□□□□□ -2.15
SNORA40.16-201ENST00000517238 DYRK3O43781 588 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 COL8A1P27658 744 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 CHRNA4P43681 627 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 SCARF1Q14162 830 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 GRIN2CQ14957 1233 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 LILRA6Q6PI73 481 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 BLOC1S3Q6QNY0 202 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 MRGPRX2Q96LB1 330 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 SLC4A1APQ9BWU0 796 aaKnown RBP1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 SLC6A16Q9GZN6 736 aa1.6□□□□□ -2.15
SNORA40.16-201ENST00000517238 ELNP15502 786 aa1.59□□□□□ -2.15
SNORA40.16-201ENST00000517238 PLPP6Q8IY26 295 aa1.59□□□□□ -2.15
SNORA40.16-201ENST00000517238 NECTIN2Q92692 538 aa1.59□□□□□ -2.15
SNORA40.16-201ENST00000517238 PURBQ96QR8 312 aaKnown RBP1.59□□□□□ -2.15
SNORA40.16-201ENST00000517238 NKAPLQ5M9Q1 402 aa1.58□□□□□ -2.16
SNORA40.16-201ENST00000517238 UPF1Q92900 1129 aaKnown RBP eCLIP1.58□□□□□ -2.16
SNORA40.16-201ENST00000517238 ADH1BP00325 375 aa1.57□□□□□ -2.16
SNORA40.16-201ENST00000517238 GATA4P43694 442 aa1.57□□□□□ -2.16
SNORA40.16-201ENST00000517238 OGFOD2Q6N063 350 aa1.57□□□□□ -2.16
SNORA40.16-201ENST00000517238 PROM2Q8N271 834 aa1.57□□□□□ -2.16
SNORA40.16-201ENST00000517238 HDGFP51858 240 aaKnown RBP1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 SRSF11Q05519 484 aaKnown RBP1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 MRPL14Q6P1L8 145 aaKnown RBP1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 PACS2Q86VP3 889 aa1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 TTC13Q8NBP0 860 aa1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 MKL2Q9ULH7 1088 aa1.56□□□□□ -2.16
SNORA40.16-201ENST00000517238 CDC14CA4D256 554 aa1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 ZBTB24O43167 697 aaPredicted RBP1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 SUV39H1O43463 412 aa1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 ALDH1A1P00352 501 aa1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 NLRP6P59044 892 aa1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 SNRPNP63162 240 aaKnown RBP1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 SH3RF1Q7Z6J0 888 aa1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 NANOS1Q8WY41 292 aaKnown RBP1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 REPIN1Q9BWE0 567 aaKnown RBP1.55□□□□□ -2.16
SNORA40.16-201ENST00000517238 OVOL3O00110 214 aa1.54□□□□□ -2.16
SNORA40.16-201ENST00000517238 SMAPO00193 183 aa1.54□□□□□ -2.16
SNORA40.16-201ENST00000517238 FOXK1P85037 733 aa1.54□□□□□ -2.16
SNORA40.16-201ENST00000517238 PRR14Q9BWN1 585 aa1.54□□□□□ -2.16
SNORA40.16-201ENST00000517238 FCF1Q9Y324 198 aaKnown RBP1.54□□□□□ -2.16
SNORA40.16-201ENST00000517238 BCRP11274 1271 aa1.53□□□□□ -2.16
SNORA40.16-201ENST00000517238 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
SNORA40.16-201ENST00000517238 OXER1Q8TDS5 423 aa1.53□□□□□ -2.16
SNORA40.16-201ENST00000517238 TPSG1Q9NRR2 321 aa1.53□□□□□ -2.16
SNORA40.16-201ENST00000517238 PCMTD2Q9NV79 361 aa1.53□□□□□ -2.16
SNORA40.16-201ENST00000517238 SV2AQ7L0J3 742 aa1.52□□□□□ -2.17
SNORA40.16-201ENST00000517238 VWA5B2Q8N398 1253 aa1.52□□□□□ -2.17
SNORA40.16-201ENST00000517238 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
SNORA40.16-201ENST00000517238 DBX2Q6ZNG2 339 aa1.51□□□□□ -2.17
SNORA40.16-201ENST00000517238 RIC3Q7Z5B4 369 aa1.51□□□□□ -2.17
SNORA40.16-201ENST00000517238 POU5F2Q8N7G0 328 aa1.51□□□□□ -2.17
SNORA40.16-201ENST00000517238 WASF2Q9Y6W5 498 aa1.51□□□□□ -2.17
SNORA40.16-201ENST00000517238 DBX1A6NMT0 343 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 FBXO22Q8NEZ5 403 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 FBXW7Q969H0 707 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 TMPRSS5Q9H3S3 457 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 SUV39H2Q9H5I1 410 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 RRAGCQ9HB90 399 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 TSKSQ9UJT2 592 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 PCDHGA10Q9Y5H3 936 aa1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 OAS3Q9Y6K5 1087 aaKnown RBP1.5□□□□□ -2.17
SNORA40.16-201ENST00000517238 GSC2O15499 205 aa1.49□□□□□ -2.17
SNORA40.16-201ENST00000517238 EVI5O60447 810 aa1.49□□□□□ -2.17
SNORA40.16-201ENST00000517238 DSG2Q14126 1118 aa1.49□□□□□ -2.17
SNORA40.16-201ENST00000517238 C6orf118Q5T5N4 469 aa1.49□□□□□ -2.17
SNORA40.16-201ENST00000517238 SLF2Q8IX21 1173 aa1.49□□□□□ -2.17
SNORA40.16-201ENST00000517238 SLC4A3P48751 1232 aa1.48□□□□□ -2.17
SNORA40.16-201ENST00000517238 PTSQ03393 145 aa1.48□□□□□ -2.17
SNORA40.16-201ENST00000517238 TRIM32Q13049 653 aa1.48□□□□□ -2.17
SNORA40.16-201ENST00000517238 TYW1BQ6NUM6 668 aa1.48□□□□□ -2.17
SNORA40.16-201ENST00000517238 PIK3R2O00459 728 aa1.47□□□□□ -2.17
SNORA40.16-201ENST00000517238 KRTAP10-7P60409 375 aaPredicted RBP1.47□□□□□ -2.17
SNORA40.16-201ENST00000517238 C6orf132Q5T0Z8 1188 aa1.47□□□□□ -2.17
SNORA40.16-201ENST00000517238 CCDC155Q8N6L0 562 aa1.47□□□□□ -2.17
SNORA40.16-201ENST00000517238 DNMT3LQ9UJW3 386 aa1.47□□□□□ -2.17
SNORA40.16-201ENST00000517238 NR1I2O75469 434 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 FCHSD2O94868 740 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 ITGA6P23229 1130 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 GP2P55259 537 aaKnown RBP1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 RC3H1Q5TC82 1133 aaKnown RBP1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 ZDHHC13Q8IUH4 622 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 ACDQ96AP0 544 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 LRRC4BQ9NT99 713 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 IGF1RP08069 1367 aa1.46□□□□□ -2.18
SNORA40.16-201ENST00000517238 GAS6Q14393 721 aa1.45□□□□□ -2.18
SNORA40.16-201ENST00000517238 ZNF124Q15973 351 aa1.45□□□□□ -2.18
SNORA40.16-201ENST00000517238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.45□□□□□ -2.18
SNORA40.16-201ENST00000517238 SPSB2Q99619 263 aa1.45□□□□□ -2.18
SNORA40.16-201ENST00000517238 ACSS3Q9H6R3 686 aa1.45□□□□□ -2.18
SNORA40.16-201ENST00000517238 NOP53Q9NZM5 478 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms