RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RCAN3Q9UKA8 241 aa7.06□□□□□ -1.28
USP38-203ENST00000511739 PRG4Q92954 1404 aaPredicted RBP7.05□□□□□ -1.28
USP38-203ENST00000511739 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 RUFY2Q8WXA3 655 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 HOOK1Q9UJC3 728 aaKnown RBP7.05□□□□□ -1.28
USP38-203ENST00000511739 NAIPQ13075 1403 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 ATP6V1DQ9Y5K8 247 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 USP47Q96K76 1375 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 DAPK1P53355 1430 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 IFIT2P09913 472 aaKnown RBP7.05□□□□□ -1.28
USP38-203ENST00000511739 CCDC146Q8IYE0 955 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 VSIG10Q8N0Z9 540 aa7.05□□□□□ -1.28
USP38-203ENST00000511739 MTMR7Q9Y216 660 aa7.04□□□□□ -1.28
USP38-203ENST00000511739 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
USP38-203ENST00000511739 RDXP35241 583 aaKnown RBP7.04□□□□□ -1.28
USP38-203ENST00000511739 CENPJQ9HC77 1338 aaPredicted RBP7.04□□□□□ -1.28
USP38-203ENST00000511739 EPS15P42566 896 aa7.04□□□□□ -1.28
USP38-203ENST00000511739 NAP1L1P55209 391 aaKnown RBP7.04□□□□□ -1.28
USP38-203ENST00000511739 GPS2Q13227 327 aa7.04□□□□□ -1.28
USP38-203ENST00000511739 G3BP1Q13283 466 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP38-203ENST00000511739 KIAA1107Q9UPP5 1409 aa7.04□□□□□ -1.28
USP38-203ENST00000511739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.04□□□□□ -1.28
USP38-203ENST00000511739 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP38-203ENST00000511739 PRKRIP1Q9H875 184 aaPredicted RBP7.04□□□□□ -1.28
USP38-203ENST00000511739 OFD1O75665 1012 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 CCDC7Q96M83 1385 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 ZNF644Q9H582 1327 aaPredicted RBP7.03□□□□□ -1.28
USP38-203ENST00000511739 HSP90AB2PQ58FF8 381 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 NECTIN2Q92692 538 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 NLRP2Q9NX02 1062 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 WDR97A6NE52 1622 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 MYBBP1AQ9BQG0 1328 aaKnown RBP7.03□□□□□ -1.28
USP38-203ENST00000511739 CFAP43Q8NDM7 1665 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 CNTLNQ9NXG0 1405 aa7.03□□□□□ -1.28
USP38-203ENST00000511739 VGFO15240 615 aaPredicted RBP7.02□□□□□ -1.29
USP38-203ENST00000511739 PPM1FP49593 454 aaPredicted RBP7.02□□□□□ -1.29
USP38-203ENST00000511739 OSCARQ8IYS5 282 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 CDR1P51861 262 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 BRMS1Q9HCU9 246 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 KIF21AQ7Z4S6 1674 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 ARHGAP5Q13017 1502 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 FAM177BA6PVY3 158 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 PLIN1O60240 522 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 FOXD4L6Q3SYB3 417 aaPredicted RBP7.02□□□□□ -1.29
USP38-203ENST00000511739 FOXD4L3Q6VB84 417 aaPredicted RBP7.02□□□□□ -1.29
USP38-203ENST00000511739 GOLGA6L3A6NEY3 463 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 WDHD1O75717 1129 aaPredicted RBP7.02□□□□□ -1.29
USP38-203ENST00000511739 RNF20Q5VTR2 975 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 ANO2Q9NQ90 1003 aa7.02□□□□□ -1.29
USP38-203ENST00000511739 ANKRD45Q5TZF3 282 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 RALYLQ86SE5 291 aaKnown RBP7.01□□□□□ -1.29
USP38-203ENST00000511739 ZBED9Q6R2W3 1325 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 NEUROD6Q96NK8 337 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 WASHC4Q2M389 1173 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 ST20-MTHFSA0A0A6YYL1 179 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 CCDC173Q0VFZ6 552 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 RIC3Q7Z5B4 369 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 RRP7AQ9Y3A4 280 aaKnown RBP7.01□□□□□ -1.29
USP38-203ENST00000511739 CDK13Q14004 1512 aaKnown RBP7.01□□□□□ -1.29
USP38-203ENST00000511739 UGGT2Q9NYU1 1516 aa7.01□□□□□ -1.29
USP38-203ENST00000511739 CCDC97Q96F63 343 aaPredicted RBP7.01□□□□□ -1.29
USP38-203ENST00000511739 MINK1Q8N4C8 1332 aaPredicted RBP7.01□□□□□ -1.29
USP38-203ENST00000511739 NUTM2BA6NNL0 878 aaPredicted RBP7□□□□□ -1.29
USP38-203ENST00000511739 NUTM2EB1AL46 878 aaPredicted RBP7□□□□□ -1.29
USP38-203ENST00000511739 XBP1P17861 261 aa7□□□□□ -1.29
USP38-203ENST00000511739 PAXIP1Q6ZW49 1069 aaPredicted RBP7□□□□□ -1.29
USP38-203ENST00000511739 NUTM2AQ8IVF1 878 aaPredicted RBP7□□□□□ -1.29
USP38-203ENST00000511739 EVC2Q86UK5 1308 aa7□□□□□ -1.29
USP38-203ENST00000511739 KIF14Q15058 1648 aa7□□□□□ -1.29
USP38-203ENST00000511739 BICD2Q8TD16 824 aa6.99□□□□□ -1.29
USP38-203ENST00000511739 RUFY1Q96T51 708 aa6.99□□□□□ -1.29
USP38-203ENST00000511739 IBSPP21815 317 aaPredicted RBP6.99□□□□□ -1.29
USP38-203ENST00000511739 ATP2B2Q01814 1243 aa6.99□□□□□ -1.29
USP38-203ENST00000511739 AIMP1Q12904 312 aaKnown RBP6.99□□□□□ -1.29
USP38-203ENST00000511739 FKBP5Q13451 457 aaPredicted RBP6.99□□□□□ -1.29
USP38-203ENST00000511739 RBM42Q9BTD8 480 aaKnown RBP6.99□□□□□ -1.29
USP38-203ENST00000511739 CGNL1Q0VF96 1302 aa6.99□□□□□ -1.29
USP38-203ENST00000511739 ADAMTS12P58397 1594 aa6.99□□□□□ -1.29
USP38-203ENST00000511739 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
USP38-203ENST00000511739 SLC3A2P08195 630 aaKnown RBP6.99□□□□□ -1.29
USP38-203ENST00000511739 SYCP1Q15431 976 aa6.99□□□□□ -1.29
USP38-203ENST00000511739 RBM5P52756 815 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP38-203ENST00000511739 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 CDK5RAP3Q96JB5 506 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 TBC1D2BQ9UPU7 963 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 CCDC141Q6ZP82 1450 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 TMEM87AQ8NBN3 555 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 ZNF592Q92610 1267 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 STRN4Q9NRL3 753 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 ABCC5O15440 1437 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 KIF7Q2M1P5 1343 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 KIF6Q6ZMV9 814 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 SART3Q15020 963 aaKnown RBP6.98□□□□□ -1.29
USP38-203ENST00000511739 HSP90AB4PQ58FF6 505 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 PDCL3Q9H2J4 239 aa6.98□□□□□ -1.29
USP38-203ENST00000511739 SPDYE4A6NLX3 237 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 KRT18P05783 430 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms