RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 ZNF687Q8N1G0 1237 aa7.69□□□□□ -1.18
SMAD1-208ENST00000510948 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
SMAD1-208ENST00000510948 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
SMAD1-208ENST00000510948 FUT2Q10981 343 aa7.68□□□□□ -1.18
SMAD1-208ENST00000510948 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
SMAD1-208ENST00000510948 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
SMAD1-208ENST00000510948 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
SMAD1-208ENST00000510948 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
SMAD1-208ENST00000510948 NDUFB9Q9Y6M9 179 aa7.68□□□□□ -1.18
SMAD1-208ENST00000510948 BHMG1C9JSJ3 638 aaPredicted RBP7.67□□□□□ -1.18
SMAD1-208ENST00000510948 C6orf229H3BNL8 230 aa7.67□□□□□ -1.18
SMAD1-208ENST00000510948 ST18O60284 1047 aa7.67□□□□□ -1.18
SMAD1-208ENST00000510948 CFHP08603 1231 aa7.67□□□□□ -1.18
SMAD1-208ENST00000510948 HELBQ8NG08 1087 aaPredicted RBP7.67□□□□□ -1.18
SMAD1-208ENST00000510948 CALR3Q96L12 384 aaKnown RBP7.67□□□□□ -1.18
SMAD1-208ENST00000510948 EMP3P54852 163 aa7.66□□□□□ -1.18
SMAD1-208ENST00000510948 POM121CA8CG34 1229 aa7.65□□□□□ -1.18
SMAD1-208ENST00000510948 CFAP99D6REC4 459 aa7.65□□□□□ -1.18
SMAD1-208ENST00000510948 TK2O00142 265 aa7.65□□□□□ -1.18
SMAD1-208ENST00000510948 WASHC4Q2M389 1173 aa7.65□□□□□ -1.18
SMAD1-208ENST00000510948 KMT5BQ4FZB7 885 aa7.65□□□□□ -1.18
SMAD1-208ENST00000510948 TSC1Q92574 1164 aa7.65□□□□□ -1.18
SMAD1-208ENST00000510948 ZFRQ96KR1 1074 aaKnown RBP7.65□□□□□ -1.18
SMAD1-208ENST00000510948 HMX1Q9NP08 348 aaPredicted RBP7.65□□□□□ -1.18
SMAD1-208ENST00000510948 FAM205CA6NFA0 338 aa7.64□□□□□ -1.19
SMAD1-208ENST00000510948 IRF5Q13568 498 aa7.64□□□□□ -1.19
SMAD1-208ENST00000510948 MRPL50Q8N5N7 158 aaKnown RBP7.64□□□□□ -1.19
SMAD1-208ENST00000510948 LRRN4Q8WUT4 740 aa7.64□□□□□ -1.19
SMAD1-208ENST00000510948 NECTIN2Q92692 538 aa7.64□□□□□ -1.19
SMAD1-208ENST00000510948 MARVELD3Q96A59 401 aa7.64□□□□□ -1.19
SMAD1-208ENST00000510948 TRIM34Q9BYJ4 488 aa7.64□□□□□ -1.19
SMAD1-208ENST00000510948 RNF40O75150 1001 aa7.63□□□□□ -1.19
SMAD1-208ENST00000510948 SYMPKQ92797 1274 aaKnown RBP7.63□□□□□ -1.19
SMAD1-208ENST00000510948 GLMNQ92990 594 aa7.63□□□□□ -1.19
SMAD1-208ENST00000510948 NACADO15069 1562 aa7.63□□□□□ -1.19
SMAD1-208ENST00000510948 ACTN4O43707 911 aaKnown RBP7.62□□□□□ -1.19
SMAD1-208ENST00000510948 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
SMAD1-208ENST00000510948 PRR7Q8TB68 274 aa7.62□□□□□ -1.19
SMAD1-208ENST00000510948 PPP1R15AO75807 674 aaPredicted RBP7.61□□□□□ -1.19
SMAD1-208ENST00000510948 MORN1Q5T089 497 aa7.61□□□□□ -1.19
SMAD1-208ENST00000510948 Q3C1V9 767 aa7.6□□□□□ -1.19
SMAD1-208ENST00000510948 RETREG3Q86VR2 466 aa7.6□□□□□ -1.19
SMAD1-208ENST00000510948 LRCH3Q96II8 777 aa7.6□□□□□ -1.19
SMAD1-208ENST00000510948 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
SMAD1-208ENST00000510948 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.6□□□□□ -1.19
SMAD1-208ENST00000510948 SLC27A5Q9Y2P5 690 aa7.6□□□□□ -1.19
SMAD1-208ENST00000510948 ACIN1Q9UKV3 1341 aaKnown RBP7.59□□□□□ -1.19
SMAD1-208ENST00000510948 GPR37L1O60883 481 aa7.59□□□□□ -1.19
SMAD1-208ENST00000510948 PUS10Q3MIT2 529 aaKnown RBP7.59□□□□□ -1.19
SMAD1-208ENST00000510948 ADGRD1Q6QNK2 874 aa7.59□□□□□ -1.19
SMAD1-208ENST00000510948 EPS8L1Q8TE68 723 aa7.59□□□□□ -1.19
SMAD1-208ENST00000510948 PRR14Q9BWN1 585 aa7.59□□□□□ -1.19
SMAD1-208ENST00000510948 VAC14Q08AM6 782 aa7.58□□□□□ -1.2
SMAD1-208ENST00000510948 DESI1Q6ICB0 168 aa7.58□□□□□ -1.2
SMAD1-208ENST00000510948 HS3ST6Q96QI5 342 aa7.58□□□□□ -1.2
SMAD1-208ENST00000510948 RB1CC1Q8TDY2 1594 aa7.58□□□□□ -1.2
SMAD1-208ENST00000510948 POTEB3A0JP26 581 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 ZBTB7CA1YPR0 619 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 PER1O15534 1290 aaPredicted RBP7.57□□□□□ -1.2
SMAD1-208ENST00000510948 HRO43593 1189 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 LSM11P83369 360 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMAD1-208ENST00000510948 NR6A1Q15406 480 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 POTEBQ6S5H4 581 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 ADAMTS19Q8TE59 1207 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 ALG2Q9H553 416 aa7.57□□□□□ -1.2
SMAD1-208ENST00000510948 PPP4CP60510 307 aa7.56□□□□□ -1.2
SMAD1-208ENST00000510948 SALL2Q9Y467 1007 aaPredicted RBP7.56□□□□□ -1.2
SMAD1-208ENST00000510948 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
SMAD1-208ENST00000510948 PNMA1Q8ND90 353 aa7.55□□□□□ -1.2
SMAD1-208ENST00000510948 ANKK1Q8NFD2 765 aa7.55□□□□□ -1.2
SMAD1-208ENST00000510948 STAC3Q96MF2 364 aa7.55□□□□□ -1.2
SMAD1-208ENST00000510948 GOLGA8CPA6NN73 597 aa7.54□□□□□ -1.2
SMAD1-208ENST00000510948 SOX11P35716 441 aa7.54□□□□□ -1.2
SMAD1-208ENST00000510948 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
SMAD1-208ENST00000510948 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
SMAD1-208ENST00000510948 RETREG2Q8NC44 543 aa7.54□□□□□ -1.2
SMAD1-208ENST00000510948 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
SMAD1-208ENST00000510948 SOWAHBA6NEL2 793 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 PDE4CQ08493 712 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 BLOC1S3Q6QNY0 202 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 RNF19BQ6ZMZ0 732 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 SCUBE3Q8IX30 993 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 PBXIP1Q96AQ6 731 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 PPP1R12CQ9BZL4 782 aa7.53□□□□□ -1.2
SMAD1-208ENST00000510948 RFX1P22670 979 aa7.52□□□□□ -1.21
SMAD1-208ENST00000510948 SEMA3FQ13275 785 aa7.52□□□□□ -1.21
SMAD1-208ENST00000510948 CFAP70Q5T0N1 1121 aa7.52□□□□□ -1.21
SMAD1-208ENST00000510948 CDAN1Q8IWY9 1227 aa7.52□□□□□ -1.21
SMAD1-208ENST00000510948 TSR3Q9UJK0 312 aaKnown RBP7.52□□□□□ -1.21
SMAD1-208ENST00000510948 HPS5Q9UPZ3 1129 aa7.52□□□□□ -1.21
SMAD1-208ENST00000510948 NR1I2O75469 434 aa7.51□□□□□ -1.21
SMAD1-208ENST00000510948 FMNL1O95466 1100 aaPredicted RBP7.51□□□□□ -1.21
SMAD1-208ENST00000510948 APLP1P51693 650 aa7.51□□□□□ -1.21
SMAD1-208ENST00000510948 SRPK2P78362 688 aaKnown RBP7.51□□□□□ -1.21
SMAD1-208ENST00000510948 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
SMAD1-208ENST00000510948 THAP11Q96EK4 314 aa7.51□□□□□ -1.21
SMAD1-208ENST00000510948 SCRIBQ14160 1630 aa7.51□□□□□ -1.21
SMAD1-208ENST00000510948 UNC13AQ9UPW8 1703 aa7.5□□□□□ -1.21
SMAD1-208ENST00000510948 PALM3A6NDB9 673 aaPredicted RBP7.5□□□□□ -1.21
SMAD1-208ENST00000510948 BCAMP50895 628 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms